GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001659-TA|BGIBMGA001659-PA|IPR007087|Zinc finger,
C2H2-type
         (157 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    34   6e-04
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    33   0.001
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      30   0.012
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    28   0.050
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    25   0.27 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   2.5  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   4.4  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   5.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   7.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.6  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 34.3 bits (75), Expect = 6e-04
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLRERHIKRENADVI-VCEICKSTFNDKRSYVPH 150
           P +C  C   ++    LKRH +++H   E +D + VCE C   +  K S   H
Sbjct: 5   PQECPYCRRNFSCYYSLKRHFQDKH---EQSDTLYVCEFCNRRYRTKNSLTTH 54


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 33.1 bits (72), Expect = 0.001
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHHRRH 154
           PYKC+ C   +     L RH+R    +R +     C +C  TF      V H R H
Sbjct: 147 PYKCDVCERAFEHSGKLHRHMRIHTGERPHK----CTVCSKTFIQSGQLVIHMRTH 198



 Score = 29.9 bits (64), Expect = 0.012
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)

Query: 100 YKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHHRRH 154
           Y+C  C   +++    + HLR     +E  D   C IC  TF        H+R H
Sbjct: 62  YQCLLCQKAFDQKNLYQSHLRSHG--KEGEDPYRCNICGKTFAVPARLTRHYRTH 114



 Score = 27.9 bits (59), Expect = 0.050
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHHRRH 154
           PY+C  C   +     L RH R    ++       CE C  +F+ K +   H R H
Sbjct: 91  PYRCNICGKTFAVPARLTRHYRTHTGEKPYQ----CEYCSKSFSVKENLSVHRRIH 142



 Score = 25.0 bits (52), Expect = 0.36
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 4/57 (7%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPHHRRHF 155
           PY C+ C  G+     LK H R    ++       C+IC  +F        H   H+
Sbjct: 203 PYVCKACGKGFTCSKQLKVHTRTHTGEKP----YTCDICGKSFGYNHVLKLHQVAHY 255


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 29.9 bits (64), Expect = 0.012
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 100 YKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPH----HRR 153
           Y C+ C    +  + LKRH  ++H +  N+   VC +C   F    S   H    HRR
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNS--AVCALCHKVFRTLNSLNNHKSIYHRR 427


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 27.9 bits (59), Expect = 0.050
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 100 YKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEICKSTFNDKRSYVPH 150
           + C+ C         LKRH+ ++H +R+  +   C IC+  +  + S + H
Sbjct: 6   FTCQLCGKVLCSKASLKRHVADKHAERQ--EEYRCVICERVYCSRNSLMTH 54


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 25.4 bits (53), Expect = 0.27
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLR 120
           P++C +C   + +D  LK H+R
Sbjct: 9   PFECPECHKRFTRDHHLKTHMR 30



 Score = 25.0 bits (52), Expect = 0.36
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLRERHIKRENADVIVCEIC 137
           PY C  C   + +   L+RHLR    +R  A    CE+C
Sbjct: 37  PYHCSHCDRQFVQVANLRRHLRVHTGERPYA----CELC 71


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/34 (29%), Positives = 21/34 (61%)

Query: 3   DFENGKSSPNDTDVKVESDSSDLETALPLSQIKE 36
           + E  +S P +  +  E D++++ TA  L+Q+K+
Sbjct: 398 EMEKRQSVPANDLLTTEKDNNEIVTAQFLNQLKK 431


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/22 (36%), Positives = 10/22 (45%)

Query: 99  PYKCEDCIVGYNKDVFLKRHLR 120
           P+KCE C         L  HL+
Sbjct: 16  PFKCEKCSYSCVNKSMLNSHLK 37


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 98  LPYKCEDCIVGYNKDVFLKRHLR 120
           LP KC  C   +++   L+ H+R
Sbjct: 41  LPCKCHLCGKAFSRPWLLQGHIR 63


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query: 101 KCEDCIVGYNKD 112
           KC+DC++G   D
Sbjct: 107 KCDDCLLGIVDD 118


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 8   KSSPNDTDVKVESD 21
           KS PND  ++ +SD
Sbjct: 193 KSPPNDEGIETDSD 206


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.133    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,578
Number of Sequences: 429
Number of extensions: 1592
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of query: 157
length of database: 140,377
effective HSP length: 53
effective length of query: 104
effective length of database: 117,640
effective search space: 12234560
effective search space used: 12234560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)