Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001658-TA|BGIBMGA001658-PA|IPR007087|Zinc finger,
C2H2-type
(259 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 67 2e-11
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 43 2e-04
09_04_0564 + 18565583-18566449,18569662-18570123 41 0.001
08_02_1172 + 24898290-24899141,24900864-24901328 40 0.002
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 40 0.003
06_03_0743 + 24069752-24070483,24071890-24072345 39 0.005
09_02_0366 + 7941550-7942161,7942230-7942775 38 0.006
09_02_0226 - 6007656-6008063,6012166-6012678 38 0.008
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 38 0.008
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 37 0.019
02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393 34 0.099
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 33 0.17
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 33 0.17
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 33 0.23
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 32 0.40
09_03_0048 + 11880848-11880952,11881030-11881312,11882667-118827... 32 0.53
12_01_0268 - 1941515-1941534,1941868-1942057,1942155-1942322,194... 31 0.70
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 31 0.92
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 31 1.2
01_06_0515 - 29959149-29959253,29959510-29959633,29959702-299597... 31 1.2
01_05_0421 + 21990034-21990392,21991691-21992681 30 1.6
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 29 2.8
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 2.8
08_02_1602 - 28148255-28149413,28151927-28152087 29 2.8
04_04_0996 + 29990255-29990425,29990797-29990841,29991024-299910... 29 2.8
03_05_0255 + 22435027-22435072,22436022-22437085 29 3.7
01_01_0990 + 7847066-7847478,7847713-7848679 29 3.7
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 29 4.9
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 29 4.9
02_05_0033 + 25250312-25250563,25251469-25251540,25251925-252520... 29 4.9
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 28 6.5
06_03_1229 + 28571131-28571235,28572108-28572656,28572749-285729... 28 6.5
04_04_0157 + 23165638-23166633 28 6.5
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 28 6.5
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 28 8.6
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 28 8.6
03_04_0187 - 18236041-18236643 28 8.6
02_05_0436 - 28971733-28972020,28972178-28972525,28972738-289729... 28 8.6
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 28 8.6
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 28 8.6
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 66.9 bits (156), Expect = 2e-11
Identities = 54/231 (23%), Positives = 106/231 (45%), Gaps = 29/231 (12%)
Query: 26 YKCDDCVIGWNNENVYKKHFERHNRI---CTQVFKAHSEYLYHQKNHHTRYICVVCGKRY 82
YKC+ C + + + + + H H++ ++++K++ E + H+ +H C CG +
Sbjct: 14 YKCEFCTVVRSKKCLIRAHMVAHHKEELDKSEIYKSNGEKVVHEGDH----TCQECGASF 69
Query: 83 RGLESCVVHYNTEHGSDRTSIPTKEYCCANTECYFTTSKKSAYTKHVASHKPKP-ECGI- 140
+ H + H +R+ I C +C F+ +K +H+ H+ K C +
Sbjct: 70 QKPAHLKQHMQS-HSDERSFI------CPLEDCPFSYIRKDHLNRHMLKHQGKLFTCSMD 122
Query: 141 -CYKQFANNHTLTLHIRKVHD-----KKNRTFKCQL--CGNEYKSRGGLKHHTSS--THD 190
C ++F+ + H++++H+ K NR F C+ C +K +K H S D
Sbjct: 123 GCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHVKLD 182
Query: 191 VIKYYC--PQCGKEFNSKYTLRNHAKHLHQDTEKRFMLKSYLRTHIEMQHL 239
++ C P C K F + LR H + HQ + + +L+ +I+ +HL
Sbjct: 183 YVEVVCCEPGCMKTFTNVECLRAHNQACHQYVQCDICGEKHLKKNIK-RHL 232
Score = 43.6 bits (98), Expect = 2e-04
Identities = 48/241 (19%), Positives = 90/241 (37%), Gaps = 29/241 (12%)
Query: 5 KEAVDRERDEKRSSETYMNLL-YKCDDCVIGWNNENVYKKHFERHNRICTQVFKAHS-EY 62
KE +D+ K + E ++ + C +C + K+H + H+ + + +
Sbjct: 38 KEELDKSEIYKSNGEKVVHEGDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPF 97
Query: 63 LYHQKNHHTRYI---------CVV--CGKRYRGLESCVVHYNTEHGSDRTSIPTKEYCCA 111
Y +K+H R++ C + CG+++ + H H + + +++ C
Sbjct: 98 SYIRKDHLNRHMLKHQGKLFTCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCK 157
Query: 112 NTECYFTTSKKSAYTKHVASHKPKPECGI------CYKQFANNHTLTLHIRKVHDKKNRT 165
C S KH SH + C K F N L H + H +
Sbjct: 158 EEGCNKVFKYASKMKKHEESHVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACH----QY 213
Query: 166 FKCQLCGNEYKSRGGLKHHTSSTHDV-----IKYYCPQCGKEFNSKYTLRNHAKHLHQDT 220
+C +CG ++ + +K H + +V IK C F++K L H K H
Sbjct: 214 VQCDICGEKHLKK-NIKRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQV 272
Query: 221 E 221
+
Sbjct: 273 K 273
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 43.2 bits (97), Expect = 2e-04
Identities = 49/237 (20%), Positives = 82/237 (34%), Gaps = 20/237 (8%)
Query: 40 VYKKHFERHNRICTQVFKAHSEYLYHQKNHHTR-YICVV--CGKRYRGLESCVVHYNTEH 96
++++ F H C + H H + + C + C +++ + H H
Sbjct: 282 LFQRPFSCHVDGCPFSYSRKDHLNRHLLTHQGKLFACPMEGCNRKFTIKGNIQRHVQEMH 341
Query: 97 GSDRTSIPTKEYCCANTECYFTTSKKSAYTKHVASH-KPKPECGICYKQFANNHTLTLHI 155
KE+ C C T S KH SH K IC + L
Sbjct: 342 KDGSPCESKKEFICPEENCGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLEC 401
Query: 156 RKVHDKK-NRTFKCQLCGNEYKSRGGLKHHT----SSTHDVIKYYCPQCGKEFNSKYTLR 210
K H+K +R C +CG + + +H S + ++ + C F+ K L
Sbjct: 402 LKAHNKSCHRHVVCDVCGTKQLKKNFKRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLD 461
Query: 211 NHAKHLHQDTE----------KRFMLKSYLRTHIEMQ-HLHIEHGCRECLKVRPRKA 256
H K +H+ K F K H + H++++ E RPR+A
Sbjct: 462 KHVKAVHEQKRPFVCGFSGCGKSFSYKHVRDNHEKSSAHVYVQANFEEIDGERPRQA 518
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 143 KQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKE 202
K + TL H ++ H K F C+ CG + +G + H + + +YC CG E
Sbjct: 336 KPLKDFRTLQTHYKRKHGLK--PFLCRKCGKAFAVKGDWRTHEKNCGKL--WYC-LCGSE 390
Query: 203 FNSKYTLRNHAK 214
F K +L++HA+
Sbjct: 391 FKHKRSLKDHAR 402
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 181 LKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAKH 215
L+ H H + + C +CGK F K R H K+
Sbjct: 344 LQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKN 378
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 40.3 bits (90), Expect = 0.002
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 150 TLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTL 209
TL H ++ H K F C+ CG + +G + H + + +YC CG EF K +L
Sbjct: 338 TLQTHYKRKHGLK--PFLCRKCGKAFAVKGDWRTHEKNCGKL--WYC-LCGSEFKHKRSL 392
Query: 210 RNHAK 214
++HA+
Sbjct: 393 KDHAR 397
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 181 LKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAKH 215
L+ H H + + C +CGK F K R H K+
Sbjct: 339 LQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKN 373
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 39.5 bits (88), Expect = 0.003
Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 13/126 (10%)
Query: 104 PTKE--YCCANTECYFTTSKKSAYTKHVASHKPKPE-CGI--CYKQFANNHTLTLHIRKV 158
PT E + C+ C T A KH H + C C K+F ++ L H
Sbjct: 37 PTTEVLFLCSYEGCGKTFVDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSKLKRHFLIH 96
Query: 159 HDKKNRTFKCQLCGN------EYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNH 212
+KN + CG ++ + +K H+ + V KY P+C + F + LR H
Sbjct: 97 TGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKY--PECARRFTQESKLRAH 154
Query: 213 AKHLHQ 218
K H+
Sbjct: 155 IKQQHE 160
Score = 35.5 bits (78), Expect = 0.043
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 141 CYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQ-- 198
C K F + L H VH ++ C ++ LK H + CP
Sbjct: 50 CGKTFVDAGALRKHAH-VHGERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEKNFVCPHEG 108
Query: 199 CGK------EFNSKYTLRNHAK---HL--HQDTEKRFMLKSYLRTHIEMQH 238
CGK +FN K ++ H+ H+ + + +RF +S LR HI+ QH
Sbjct: 109 CGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQH 159
Score = 30.3 bits (65), Expect = 1.6
Identities = 39/183 (21%), Positives = 62/183 (33%), Gaps = 22/183 (12%)
Query: 52 CTQVFKAHSEYLYHQKNHHTR-YIC--VVCGKRYRGLESCVVHYNTEHGSDRTSIPTKEY 108
C + F H H R Y+C C K++ H+ H ++ + E
Sbjct: 50 CGKTFVDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSKLKRHFLI-HTGEKNFVCPHEG 108
Query: 109 CCANTECYFTTSKKSAYTKHVASHKPKPECGICYKQFANNHTLTLHIRKVHDKKNRTFKC 168
C + K+ H + + C ++F L HI++ H+K
Sbjct: 109 CGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQHEKGG----L 164
Query: 169 QLCGNEYKSRGGLKHHTSSTHDV------------IKYYCPQ--CGKEFNSKYTLRNHAK 214
Q G +R GL H+ ++H Y CP C K + +Y L H K
Sbjct: 165 QNPGGSATNRSGLADHSHNSHTPKPSAAPPTPSADRPYVCPYDGCAKAYIHEYKLNLHLK 224
Query: 215 HLH 217
H
Sbjct: 225 KEH 227
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 150 TLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTL 209
TL H ++ H K F C+ CG + RG + H + + +YC CG +F K +L
Sbjct: 298 TLQTHYKRKHGIK--PFMCRKCGKAFAVRGDWRTHEKNCGKL--WYC-ACGSDFKHKRSL 352
Query: 210 RNHAK 214
++H +
Sbjct: 353 KDHIR 357
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 150 TLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTL 209
TL H R+ H R + C+ CG + RG + H + + ++C CG +F K +L
Sbjct: 265 TLQTHYRRKHGA--RPYACRRCGKRFAVRGDWRTHEKNCGKL--WFC-VCGSDFKHKRSL 319
Query: 210 RNHAK 214
++H +
Sbjct: 320 KDHVR 324
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 150 TLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTL 209
TL H ++ H K F C+ CG RG + H + +++C CG +F K +L
Sbjct: 225 TLQTHYKRKHCAK--PFACRKCGKPLAVRGDWRTHEKNCGR--RWHCA-CGSDFKHKRSL 279
Query: 210 RNHAKHLHQDTEKR 223
++H + +D +R
Sbjct: 280 KDHIRAFGRDHRER 293
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 134 PKPECGICYKQFANNHTLTLHIRKVHDKK----NRTFKCQLCGNEYKSRGGLKHHTSSTH 189
P +C IC ++F+++ L LH +VH K+ R + C +C + + +R L+ H H
Sbjct: 461 PGLKCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKH 520
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 141 CYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQ-- 198
C K F + L H VH+++ + CG ++ LK H + CP
Sbjct: 94 CGKTFVDVAALRKHAH-VHNERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPG 152
Query: 199 CGKEFNSKYTLRNHAK-HLHQDTE--------KRFMLKSYLRTHIE 235
CGK F+ + LR+H K H ++ KRF S L++H++
Sbjct: 153 CGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHVK 198
Score = 34.7 bits (76), Expect = 0.075
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 171 CGNEYKSRGGLKHHTSSTHDVIKYYC--PQCGKEF-NSKYTLRNHAKHL--------HQD 219
CG + L+ H + H+ +Y C P CGK+F +S R+H H H
Sbjct: 94 CGKTFVDVAALRKH-AHVHNERQYICQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPG 152
Query: 220 TEKRFMLKSYLRTHIEMQHLHIEHGC 245
K F L LR+H++ L H C
Sbjct: 153 CGKAFSLDFNLRSHLKTHALENYHVC 178
>02_01_0719 - 5364430-5364440,5364635-5365055,5365857-5366393
Length = 322
Score = 34.3 bits (75), Expect = 0.099
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 150 TLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTL 209
TL H R+ H R F C+ C + RG + H + + + C CG F K +L
Sbjct: 234 TLQTHYRRRHGA--RDFACRRCAKRFAVRGDWRTHEKNCGRL--WRCA-CGAHFRHKRSL 288
Query: 210 RNHAK 214
+HA+
Sbjct: 289 NDHAR 293
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 33.5 bits (73), Expect = 0.17
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 42 KKHFER----HNRI----CTQVFKAHSEYLYHQKNHHTRYICVVCGKRYRGLESCVVHYN 93
KKHF R H + C++ + HS+Y H K TR CG+ + +ES + H +
Sbjct: 131 KKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD 190
Query: 94 TEHGS 98
T + S
Sbjct: 191 TCNAS 195
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 137 ECGICYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYC 196
E C F N L++H KKN T + CG ++S L+ H S +D + Y C
Sbjct: 543 EIDYCRMTFKNRAELSVH------KKN-TCTVKSCGRHFRSHKYLRRHQSIHNDDMPYKC 595
Query: 197 PQCGKEFNSKYTLRNHAKHLHQDTEKR 223
P G K++ + +H KR
Sbjct: 596 PWEGCSMAFKWSW-DRGEHFQVHAGKR 621
>06_03_1283 -
28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 33.1 bits (72), Expect = 0.23
Identities = 42/169 (24%), Positives = 65/169 (38%), Gaps = 18/169 (10%)
Query: 93 NTEHGSDRTSIPTKEYCCANTECYFTTSKKSAYTKHVASHKPKPECGICYKQFANNHTLT 152
++ HGS + C++ C S K + A H E +++ A+ H+
Sbjct: 721 SSHHGSHAKKNHGVSHHCSDGPCKSMVSCKESSVAKNACHDHHHEHNH-HEEPAHKHSSN 779
Query: 153 LHIRKVHDKKNRTFKC-----QLCGNEYKSRGGLKH--HTSSTHDVIKYYC-----PQCG 200
H HD + C QL N++ G H TS+ HD K+ C C
Sbjct: 780 QH--GCHDHSHGHSNCKEPSNQLITNKHACHDGHNHCADTSNLHDTKKHDCHGHEHSTCK 837
Query: 201 KEFNSKYTLRNHAKHLHQDT--EKRFMLKSYLRTHIEMQHLHIEHGCRE 247
+E N+ +HA H H+ + E+ L S H +H H C E
Sbjct: 838 EELNALPPTNDHACHGHEHSHCEEPVALHS-TGEHACHEHEHEHIHCDE 885
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 154 HIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNH 212
H + H +K T CQ CG Y + LK HT T +Y C CG F + + H
Sbjct: 127 HFCRKHGEKRWT--CQRCGKRYAVQADLKAHT-KTCGTREYRC-DCGTLFTRRDSFVTH 181
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 180 GLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAK 214
G+K H H ++ C +CGK + + L+ H K
Sbjct: 123 GIKKHFCRKHGEKRWTCQRCGKRYAVQADLKAHTK 157
>09_03_0048 +
11880848-11880952,11881030-11881312,11882667-11882770,
11883998-11884416,11884698-11884998,11885136-11885232,
11885719-11885864,11885975-11886103
Length = 527
Score = 31.9 bits (69), Expect = 0.53
Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 52 CTQVFKAHSEYLYHQKNHHTRYIC---VVCGKRYRGLESCVVHYNTEHGSDRTSIPTKEY 108
C + K + + + H+ R +C + GK +G E H ++ G+ R + P E
Sbjct: 247 CPRGSKCNYRHDEEAREHYNRNVCFDFLNKGKCEKGPECRFAHSLSDEGAVRDTKPRSER 306
Query: 109 CCANTECYFTTSKKSAYTKHVASHKPKPECGICYKQFANNHTLTLHI 155
+ C+F S + V S C + NH L + +
Sbjct: 307 RRVESSCWFCLSSPDVESHLVISIGEGYYCALAKGPLVPNHVLVIPV 353
>12_01_0268 -
1941515-1941534,1941868-1942057,1942155-1942322,
1943425-1943568,1944284-1944443,1944512-1944621,
1944900-1945019,1945649-1945766,1946610-1946729,
1947228-1947285,1947590-1947723,1949332-1949414,
1949544-1949786,1949851-1949976,1950075-1951562
Length = 1093
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 181 LKHHTSSTHDVIKYYCPQCGKEFNS 205
LK +T+ V KY CP CGK F++
Sbjct: 846 LKSQLENTNTVDKYTCPNCGKSFSA 870
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 42 KKHFER----HNRI----CTQVFKAHSEYLYHQKNHHTRYICVVCGKRYRGLESCVVH 91
KKHF R H + C++ + HS+Y H K TR CG+ + +ES + H
Sbjct: 130 KKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLKTCGTRGHTCDCGRVFSRVESFIEH 187
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 18/95 (18%)
Query: 138 CGICYKQFANNHTLTLHIR------KVHDK-----KNRTFKCQ--LCGNEYKSRG----- 179
C +C+K F + L LH R K+ + K + + C C + +R
Sbjct: 68 CEVCHKGFQRDQNLQLHRRGHNLPWKLKQRSSTEAKKKVYVCPEITCPHHDATRALGDLT 127
Query: 180 GLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAK 214
G+K H S H K+ C +C K++ + + H K
Sbjct: 128 GIKKHYSRKHGEKKWKCDRCSKKYAVQSDWKAHTK 162
>01_06_0515 -
29959149-29959253,29959510-29959633,29959702-29959793,
29959921-29960003,29960573-29960654,29960707-29960784,
29960875-29960967,29961647-29961734,29961822-29961991
Length = 304
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 163 NRTFKCQLCGNEYKSR---GGLKHHTSSTHDVIKYYCPQCGKE 202
N F C+ C NE K+ +K H H+V + C CG E
Sbjct: 73 NEIFDCRHCHNETKNSIKIDAVKRHELPRHEVQQVICSLCGTE 115
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 30.3 bits (65), Expect = 1.6
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 24/185 (12%)
Query: 72 RYICVVCGKRYRGLESCVVH-------YNTEHGSDRTSIPTKEYCCANTECY-------- 116
R++C +CGK ++ ++ +H + + + ++ K Y C C
Sbjct: 5 RFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVRKKVYICPEASCVHHDPSRAL 64
Query: 117 --FTTSKKSAYTKHVASHKPKPECGICYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNE 174
T KK + KH + K +C C K++A + H + R +KC CG
Sbjct: 65 GDLTGIKKHFFRKH---GEKKWKCDKCSKKYAVHSDWKAHSKIC---GTREYKCD-CGTI 117
Query: 175 YKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAKHLHQDTEKRFMLKSYLRTHI 234
+ R H + + + G + +H H H + F + H
Sbjct: 118 FSRRDSFITHRAFCDALTEESAKAIGGIPAAMAAPGHHHHHHHHHHQLLFSPPPVMAHHQ 177
Query: 235 EMQHL 239
E+ L
Sbjct: 178 ELAAL 182
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 154 HIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNH 212
H + H +K ++C+ CG Y K H + +Y C CG F+ K +L H
Sbjct: 114 HFSRKHGEKR--WRCERCGKRYAVHSDWKAHVKNC-GTREYRC-DCGILFSRKDSLLTH 168
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 180 GLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAKH 215
G+K H S H ++ C +CGK + + H K+
Sbjct: 110 GIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVKN 145
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 42 KKHFERHNRI--CTQVFKAHSEYLYHQKNHHTRYICVVCGKRYRGLESCVVH 91
+KH E+ R C + + HS++ H KN TR CG + +S + H
Sbjct: 117 RKHGEKRWRCERCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTH 168
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Query: 138 CGICYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTH 189
C C ++F + L H + H FKC +C + + GG+ H H
Sbjct: 13 CYYCDREFDDEKILVQHQKAKH------FKCHVCHKKLSTAGGMAIHVLQVH 58
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 182 KHHTSSTHDVIKYYCPQCG-KEFNSKYTLRNHAKH 215
K+H +H Y C +CG K F+ LR H KH
Sbjct: 338 KNHYKRSHCPKMYVCNRCGRKHFSVLSDLRTHEKH 372
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 138 CGICYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCP 197
C +C K F + L +H+R H + ++ + ++GG + ++ KY CP
Sbjct: 260 CQVCGKGFKRDANLRMHMR-AHGDEYKSKAALSNPTKLLAKGGDETMAAAAR---KYSCP 315
Query: 198 QCGKEFNSKY 207
Q G +N ++
Sbjct: 316 QEGCRWNRRH 325
>04_04_0996 +
29990255-29990425,29990797-29990841,29991024-29991098,
29991481-29991691,29992057-29992442,29993202-29993425,
29993529-29993664,29993699-29993761,29993842-29994021
Length = 496
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Query: 145 FANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFN 204
FA+ L+ I + + + +C CG G H S + + +C CGK N
Sbjct: 309 FASKMNLSNEISSIKEVLRSSVRCPHCGTAISRVSGCNHMLCS--NCRQSFCYGCGKAEN 366
Query: 205 SKYTLRNHAKHLHQDTEKR-FMLKSYLRTHIEMQHLHIEHGCRECLKVRPR 254
++ + T+K +L ++ +E + L +H C C + P+
Sbjct: 367 HGHSSEPCRYQENLATKKNPTVLIEEVKKELEGE-LSRQHPCPNCRQPNPK 416
>03_05_0255 + 22435027-22435072,22436022-22437085
Length = 369
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 134 PKPECGICYKQFANNHTLTLHIRKVHDKKNR 164
PK EC +C+K F + L++H+ K H R
Sbjct: 104 PKAECQLCFKAFHSCDALSMHM-KAHGHHGR 133
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 29.1 bits (62), Expect = 3.7
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 18/95 (18%)
Query: 138 CGICYKQFANNHTLTLHIR------KVHDK-----KNRTFKC--QLCGNEYKSRG----- 179
C IC K F + L LH R K+ + + R + C + C + SR
Sbjct: 27 CEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEKSCVHHNPSRALGDLT 86
Query: 180 GLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAK 214
G+K H H K+ C +C K + + + H+K
Sbjct: 87 GIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK 121
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 196 CPQCGKEFNSKYTLRNHAKHLH 217
C C K FNS+ L++H+K H
Sbjct: 172 CKSCSKTFNSEMALQSHSKAKH 193
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.7 bits (61), Expect = 4.9
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 18/95 (18%)
Query: 138 CGICYKQFANNHTLTLHIR------KVHDK-----KNRTFKCQ--LCGNEYKSRG----- 179
C IC K F + L LH R K+ + + R + C C + SR
Sbjct: 50 CEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRVYVCPEPTCVHHDPSRALGDLT 109
Query: 180 GLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAK 214
G+K H H K+ C +C K++ + + H K
Sbjct: 110 GIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHTK 144
>02_05_0033 +
25250312-25250563,25251469-25251540,25251925-25252069,
25253449-25253558,25253665-25254079,25254166-25254413
Length = 413
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 170 LCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHA 213
+CGN + GL H I YYCP C SK +L H+
Sbjct: 323 ICGNCHM-HNGLARKEDYPH--ITYYCPHCHALNTSKQSLGQHS 363
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 28.3 bits (60), Expect = 6.5
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 18/95 (18%)
Query: 138 CGICYKQFANNHTLTLHIR------KVHDK-----KNRTFKCQ--LCGNEYKSRG----- 179
C +C K F L LH R K+ K + R + C C + SR
Sbjct: 50 CEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRRVYLCPEPSCVHHDPSRALGDLT 109
Query: 180 GLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAK 214
G+K H H K+ C +C K + + + H+K
Sbjct: 110 GIKKHYCRKHGEKKWRCDKCSKRYAVQSDWKAHSK 144
>06_03_1229 +
28571131-28571235,28572108-28572656,28572749-28572918,
28573454-28573669,28573787-28573946
Length = 399
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 75 CVVCGKRYRGLESCVVHYNTEHGSDRTSIPTKEY 108
C +C + +E+C+VH + +HG IP EY
Sbjct: 174 CFMCDLEHDTIENCMVHMHKKHG---FFIPDSEY 204
>04_04_0157 + 23165638-23166633
Length = 331
Score = 28.3 bits (60), Expect = 6.5
Identities = 8/27 (29%), Positives = 18/27 (66%)
Query: 73 YICVVCGKRYRGLESCVVHYNTEHGSD 99
++C VCG+R+R ++ + H++ H +
Sbjct: 104 HLCRVCGRRFRARDTLLRHFDAIHARE 130
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 108 YCCANTECYFTTSKKSAYTKHVASHKPKPECGICYKQFANNHTLTLHIRKVHD 160
Y C + Y T S +H A +K K Y+QF T +L +++ +
Sbjct: 4 YYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKE 56
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 17 SSETYMNLLYKCDDCVIGWNNENVY------KKHFERHNRI 51
S+ + N +Y CD C + ++E + K+H ERHN I
Sbjct: 373 SAHHHQNRMYYCDICEVRCSSEKMMASHLAGKRHRERHNSI 413
>06_03_1306 +
29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Query: 104 PTKEYCCANTECYFTTSKKSAYTKHVASHKPKPECGICYKQFANNHTLTLHIR-KVHDKK 162
PT E A +E TS + + + K +C Q L K DK+
Sbjct: 427 PTSEKKEAESEAGAATSAQPSSEDKSPDAECKSSPPVCTTQDTQRRRLEKEKHGKTVDKE 486
Query: 163 NRTFKCQLCGNEYKSRGGLKHH 184
+ C CG ++ L+HH
Sbjct: 487 TQKVSCNYCGKVVRTYNRLEHH 508
>03_04_0187 - 18236041-18236643
Length = 200
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 72 RYICVVCGKRYRGLESCVVHYNTEHGSDRTSIPTKEYCCANTECYFTTSKKSAYTKHVAS 131
R+ C VCGK + ++ H + ++P T+ S T S
Sbjct: 47 RFRCSVCGKAFPSHQALGGHKASHRKPPTAALPMHVIDAPPPPSAEDTASSSTTT--TTS 104
Query: 132 HKPKPECGICYKQFANNHTLTLHIR 156
+ C +C++ FA L H R
Sbjct: 105 GGGRHRCSVCHRTFATGQALGGHKR 129
>02_05_0436 -
28971733-28972020,28972178-28972525,28972738-28972920,
28973096-28973170,28973238-28973392,28973540-28974043,
28975889-28975964
Length = 542
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/63 (25%), Positives = 26/63 (41%)
Query: 82 YRGLESCVVHYNTEHGSDRTSIPTKEYCCANTECYFTTSKKSAYTKHVASHKPKPECGIC 141
Y GLESC+++ ++ S T C T+ + +K V+S +C
Sbjct: 60 YNGLESCIINSSSYDDDSGLSATTGADGCVTTDSVDDEVSSCSSSKDVSSSSFSSQCHPL 119
Query: 142 YKQ 144
KQ
Sbjct: 120 RKQ 122
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 27.9 bits (59), Expect = 8.6
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 19/96 (19%)
Query: 138 CGICYKQFANNHTLTLHIR------KVHDK------KNRTFKCQ--LCGNEYKSRG---- 179
C +C K F L LH R K+ K + R + C C + SR
Sbjct: 97 CEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPLQAQRRRVYLCPEPTCVHHDPSRALGDL 156
Query: 180 -GLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAK 214
G+K H H K+ C +C K + + + H+K
Sbjct: 157 TGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK 192
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 27.9 bits (59), Expect = 8.6
Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 18/127 (14%)
Query: 72 RYICVVCGKRYRGLESCVVH-------YNTEHGSDRTSIPTKEYCCANTECYFTTSKK-- 122
RY+C +CGK ++ ++ +H + + + + + K Y C C +
Sbjct: 73 RYVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRNPKEVVRKKVYVCPEAGCVHHDPARAL 132
Query: 123 ---SAYTKHVA-SH-KPKPECGICYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKS 177
+ KH + H + K +C C K++A + H + R ++C CG +
Sbjct: 133 GDLTGIKKHFSRKHGEKKWKCDKCSKRYAVHSDWKAHSKVC---GTREYRCD-CGTLFSR 188
Query: 178 RGGLKHH 184
R H
Sbjct: 189 RDSFITH 195
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.133 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,057,454
Number of Sequences: 37544
Number of extensions: 337990
Number of successful extensions: 1001
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 902
Number of HSP's gapped (non-prelim): 111
length of query: 259
length of database: 14,793,348
effective HSP length: 81
effective length of query: 178
effective length of database: 11,752,284
effective search space: 2091906552
effective search space used: 2091906552
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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