GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001658-TA|BGIBMGA001658-PA|IPR007087|Zinc finger,
C2H2-type
         (259 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    48   3e-07
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    35   0.002
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    35   0.002
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    33   0.006
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    31   0.044
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   0.41 
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    25   2.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.6  
AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450 pr...    23   8.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 48.0 bits (109), Expect = 3e-07
 Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 26  YKCDDCVIGWNNENVYKKHFERHNRI-------CTQVFKAHSEYLYHQKNH--HTRYICV 76
           +KC +C       +  K+H   H          CT       +   H + H     Y C 
Sbjct: 212 HKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCD 271

Query: 77  VCGKRYRGLESCVVHYNTEHGSDRTSIPTKEYCCANTECYFTTSKKSAYTKHVASHKPKP 136
           VC  R+    S   H       ++     K   C  T    T  +      H A  KP  
Sbjct: 272 VCFARFTQSNSLKAHKMIHQVGNKPVFQCK--LCPTTCGRKTDLRIHVQNLHTAD-KPI- 327

Query: 137 ECGICYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIKYYC 196
           +C  C   F + ++  +H  K H+ + + ++C+ C     S   L+ H     D   Y C
Sbjct: 328 KCKRCDSTFPDRYSYKMHA-KTHEGE-KCYRCEYCPYASISMRHLESHLLLHTDQKPYKC 385

Query: 197 PQCGKEFNSKYTLRNHAKHLH 217
            QC + F  K  L+ H  + H
Sbjct: 386 DQCAQTFRQKQLLKRHMNYYH 406



 Score = 39.9 bits (89), Expect = 7e-05
 Identities = 42/151 (27%), Positives = 55/151 (36%), Gaps = 12/151 (7%)

Query: 66  QKNHHTRYICVVCGKRYRGLESCVVHYNTEHGSDRTSIPTKEYCCANTECYFTTSKKSAY 125
           Q++  + Y+C  C      L     H  T H  DR   P K   C   E  F T   ++ 
Sbjct: 120 QQSTGSTYMCNYCNYTSNKLFLLSRHLKT-HSEDR---PHK---CVVCERGFKTL--ASL 170

Query: 126 TKHVASHK-PKPE-CGICYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKH 183
             HV +H   KP  C  C   F  +  L  HIR  H  + R  KC  C         LK 
Sbjct: 171 QNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHE-RPHKCTECDYASVELSKLKR 229

Query: 184 HTSSTHDVIKYYCPQCGKEFNSKYTLRNHAK 214
           H  +      + CP C      K+ L  H +
Sbjct: 230 HIRTHTGEKPFQCPHCTYASPDKFKLTRHMR 260



 Score = 39.5 bits (88), Expect = 9e-05
 Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 26/182 (14%)

Query: 57  KAHSEYLYHQKNHHTRYICVVCGKRYRGLESCVVHYNTEHGSDRTSIPTKEYCCANTECY 116
           KAH   + HQ  +   + C +C           +H    H +D+   P K   C    C 
Sbjct: 284 KAHK--MIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADK---PIK---CKR--CD 333

Query: 117 FTTSKKSAYTKHVASHKPKP--ECGIC-YKQFANNHTLTLHIRKVHDKKNRTFKCQLCGN 173
            T   + +Y  H  +H+ +    C  C Y   +  H L  H+    D+K   +KC  C  
Sbjct: 334 STFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRH-LESHLLLHTDQK--PYKCDQCAQ 390

Query: 174 EYKSRGGLKHHTSSTH--DVI-------KYYCPQCGKEFNSKYTLRNH-AKHLHQDTEKR 223
            ++ +  LK H +  H  D +        + CP C + F  K  L  H A H  + T  +
Sbjct: 391 TFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHDPESTVSK 450

Query: 224 FM 225
            M
Sbjct: 451 EM 452



 Score = 27.1 bits (57), Expect = 0.54
 Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 9/118 (7%)

Query: 27  KCDDCVIGWNNENVYKKHFERHN-RIC--TQVFKAHSEYLYHQKNH---HTR---YICVV 77
           KC  C   + +   YK H + H    C   +     S  + H ++H   HT    Y C  
Sbjct: 328 KCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQ 387

Query: 78  CGKRYRGLESCVVHYNTEHGSDRTSIPTKEYCCANTECYFTTSKKSAYTKHVASHKPK 135
           C + +R  +    H N  H  D  +   K        C      K    +H+A H P+
Sbjct: 388 CAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHDPE 445


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 148 NHTLTLHIRKVHDKKNRT-FKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSK 206
           +H ++ H      ++  T ++C+ CG E  +R    HH  S H   +  CP C   ++  
Sbjct: 508 HHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRW---HHFHS-HTPQRSLCPYCPASYSRI 563

Query: 207 YTLRNHAKHLHQD 219
            TLR+H +  H D
Sbjct: 564 DTLRSHLRIKHAD 576


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 148 NHTLTLHIRKVHDKKNRT-FKCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSK 206
           +H ++ H      ++  T ++C+ CG E  +R    HH  S H   +  CP C   ++  
Sbjct: 484 HHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRW---HHFHS-HTPQRSLCPYCPASYSRI 539

Query: 207 YTLRNHAKHLHQD 219
            TLR+H +  H D
Sbjct: 540 DTLRSHLRIKHAD 552


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 171 CGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAKHLHQDTEKRF 224
           C + +K+     HH ++ H    + CP CG++F  +  ++ H K  H +   RF
Sbjct: 901 CVSCHKTVSNRWHH-ANIHRPQSHECPVCGQKFTRRDNMKAHCKVKHPELRDRF 953



 Score = 27.5 bits (58), Expect = 0.41
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 138 CGICYKQFANNHTLTLHIRKVHDKKNRTFKCQLCGNEYKSRGGLKHHTSSTHDVIK 193
           C  C+K  +N      H   +H  + ++ +C +CG ++  R  +K H    H  ++
Sbjct: 901 CVSCHKTVSNRW----HHANIH--RPQSHECPVCGQKFTRRDNMKAHCKVKHPELR 950



 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 52  CTQVFKAHSEYLYHQKNHHTR-YICVVCGKRYRGLESCVVHYNTEH 96
           C    K  S   +H   H  + + C VCG+++   ++   H   +H
Sbjct: 901 CVSCHKTVSNRWHHANIHRPQSHECPVCGQKFTRRDNMKAHCKVKH 946


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 30.7 bits (66), Expect = 0.044
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 121 KKSAYTKH-VASHKPKPECGICYKQFANNHTLTLHIRKVHDKKNRTF 166
           +K  Y  H +++     +C IC+K F+      LH+R +H K   +F
Sbjct: 365 QKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIHPKPGVSF 411



 Score = 27.9 bits (59), Expect = 0.31
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 162 KNRTFKCQLCGNEYKSRGGLKHHTSSTHDV----IKYYCPQCGKEFNSKYTLRNHAKHLH 217
           + + F+C LC   Y+++   + H    H +        C  C K F+ +   + H + +H
Sbjct: 345 EGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 167 KCQLCGNEYKSRGGLKHHTSSTHDVIKYYCPQCGKEFNSKYTLRNHAKHLH 217
           +C+LCG   K    +++H    H   ++ CP C   +     LR H K  H
Sbjct: 501 RCKLCG---KVVTHIRNHYH-VHFPGRFECPLCRATYTRSDNLRTHCKFKH 547


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 111 ANTECYFTTSKKSAYTKHVASHKPKPEC 138
           A+ +CY  T   S Y + VA +   P+C
Sbjct: 77  ASKKCYIITVGDSFYLRDVAKNLISPQC 104


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 43  KHFE--RHNRICTQVFKAHSEYLYHQKNHHTRYICVVCGKRYRGLESCVVHYNTEHGSDR 100
           +H++  R  R  +  F  HS Y  + +  + RY+  +     R  +S    YN++  S  
Sbjct: 423 RHYQTRRCQRSRSIYFDTHSLYCSYNRFRYRRYLSKIQRNLCRWPDSFWRFYNSKTKSTH 482

Query: 101 T--SIPTKEYCCANT 113
           T  SI  K    ANT
Sbjct: 483 TPKSITYKGATSANT 497


>AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450
          protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 5  KEAVDRERDEKRSSETYMNLLY 26
          +E +DR   + RS + Y NL Y
Sbjct: 9  QEVLDRSSSDPRSVQDYQNLPY 30


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.133    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 312,677
Number of Sequences: 2123
Number of extensions: 13947
Number of successful extensions: 42
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 19
Number of HSP's gapped (non-prelim): 18
length of query: 259
length of database: 516,269
effective HSP length: 63
effective length of query: 196
effective length of database: 382,520
effective search space: 74973920
effective search space used: 74973920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)