Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001657-TA|BGIBMGA001657-PA|IPR007087|Zinc finger,
C2H2-type, IPR011526|Helix-turn-helix, Psq-like,
IPR009057|Homeodomain-like, IPR007889|Helix-turn-helix, Psq
(1427 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 50 1e-07
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 44 6e-06
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 42 3e-05
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 38 6e-04
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 36 0.003
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 35 0.005
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 35 0.005
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 35 0.005
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 33 0.018
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 31 0.056
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 27 0.69
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 25 2.8
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 3.7
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 25 4.9
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 50.0 bits (114), Expect = 1e-07
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 272 HNKPT-CDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSHNSSAHGG 330
+ KP C +CG + S+LK H+ T P Y C C K + + L +H H G
Sbjct: 246 NQKPNVCRICGKSYARPSTLKTHLRTHSGEKP--YRCIDCNKSFSQAANLTAH-VRTHSG 302
Query: 331 GAQYH--TCRTHYRSHRALMHHLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHIEWEH 388
+ C + ++ H++THS R + C C+ F++ +L H+ H
Sbjct: 303 EKPFRCPVCDRRFSQSSSVTTHMRTHSGER-----PYRCRLCKKAFSDSSTLTKHLR-IH 356
Query: 389 LLMRHHRCVKC 399
+ + C C
Sbjct: 357 SGEKPYECKLC 367
Score = 33.1 bits (72), Expect = 0.014
Identities = 27/129 (20%), Positives = 41/129 (31%), Gaps = 17/129 (13%)
Query: 204 PYKCDLCVVGFATETIYQGHIQKHHNKNKNGFSCDICDSVLNSIPILXXXXXXXXXXXXX 263
PY+C C F+ H++ H + F C +CD +
Sbjct: 277 PYRCIDCNKSFSQAANLTAHVRTH--SGEKPFRCPVCDRRFSQ------------SSSVT 322
Query: 264 XXXXXXXKHNKPTCDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSH 323
C LC F +S+L H+ P Y C+LC + L+ H
Sbjct: 323 THMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKP--YECKLCLLRFSQSGNLNRH 380
Query: 324 NSSAHGGGA 332
HG +
Sbjct: 381 -MRVHGAAS 388
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 44.4 bits (100), Expect = 6e-06
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 276 TCDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSHNSSAHGGGAQYH 335
TC++C F L+ H T P + C+ C K + L +H H G Y
Sbjct: 136 TCEVCNRSFGYKHVLQNHERTHTGEKP--FECQECHKRFTRDHHLKTH-MRLHTGERPYR 192
Query: 336 T--CRTHYRSHRALMHHLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHIEWEHLLMRH 393
C + L HL+ H T E + C C KF++ L++H+ L+ +
Sbjct: 193 CEHCDRQFVQVANLRRHLRVH-----TGERPYGCEHCSMKFSDSNQLKAHV----LIHTN 243
Query: 394 HRCVKCDK 401
+ +CDK
Sbjct: 244 EKPFECDK 251
Score = 44.0 bits (99), Expect = 7e-06
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 10/109 (9%)
Query: 277 CDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSHNSSAHGGGAQY-- 334
C C F + LK HM P Y CE C + + + L H H G Y
Sbjct: 165 CQECHKRFTRDHHLKTHMRLHTGERP--YRCEHCDRQFVQVANLRRH-LRVHTGERPYGC 221
Query: 335 HTCRTHYRSHRALMHHLKTHSAHRDTSEYKFECADCEGKFANKQSLRSH 383
C + L H+ H T+E FEC C G+F + L H
Sbjct: 222 EHCSMKFSDSNQLKAHVLIH-----TNEKPFECDKCRGRFRRRHHLVHH 265
Score = 41.9 bits (94), Expect = 3e-05
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 337 CRTHYRSHRALMHHLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHIEWEHLLMRHHRC 396
C + L +H +TH T E FEC +C +F L++H+ H R +RC
Sbjct: 140 CNRSFGYKHVLQNHERTH-----TGEKPFECQECHKRFTRDHHLKTHMRL-HTGERPYRC 193
Query: 397 VKCDKVPVRNGTLR 410
CD+ V+ LR
Sbjct: 194 EHCDRQFVQVANLR 207
Score = 32.3 bits (70), Expect = 0.024
Identities = 30/149 (20%), Positives = 49/149 (32%), Gaps = 19/149 (12%)
Query: 204 PYKCDLCVVGFATETIYQGHIQKHHNKNKNGFSCDICDSVLNSIPILXXXXXXXXXXXXX 263
P+ C++C F + + Q H + H + F C C
Sbjct: 134 PFTCEVCNRSFGYKHVLQNHERTH--TGEKPFECQECHK------------RFTRDHHLK 179
Query: 264 XXXXXXXKHNKPTCDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSH 323
C+ C FV ++L+ H+ P Y CE C+ + + L +H
Sbjct: 180 THMRLHTGERPYRCEHCDRQFVQVANLRRHLRVHTGERP--YGCEHCSMKFSDSNQLKAH 237
Query: 324 NSSAHGGGAQYH--TCRTHYRSHRALMHH 350
H + CR +R L+HH
Sbjct: 238 -VLIHTNEKPFECDKCRGRFRRRHHLVHH 265
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 41.9 bits (94), Expect = 3e-05
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Query: 277 CDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSHNSSAHGGGAQYH- 335
C +C F +SS+ HM T P Y C LC K + S L H H G Y
Sbjct: 52 CPVCDRRFSQSSSVTTHMRTHSGERP--YRCRLCKKAFSDSSTLTKH-LRIHSGEKPYEC 108
Query: 336 -TCRTHYRSHRALMHHLKTHSA 356
C + L H++ H A
Sbjct: 109 KLCLLRFSQSGNLNRHMRVHGA 130
Score = 34.7 bits (76), Expect = 0.005
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 341 YRSHRALMHHLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHIEWEHLLMRHHRCVKCD 400
Y L HL+THS E + C DC F+ +L +H+ H + RC CD
Sbjct: 3 YARPSTLKTHLRTHSG-----EKPYRCIDCNKSFSQAANLTAHVR-THSGEKPFRCPVCD 56
Query: 401 K 401
+
Sbjct: 57 R 57
Score = 33.1 bits (72), Expect = 0.014
Identities = 27/129 (20%), Positives = 41/129 (31%), Gaps = 17/129 (13%)
Query: 204 PYKCDLCVVGFATETIYQGHIQKHHNKNKNGFSCDICDSVLNSIPILXXXXXXXXXXXXX 263
PY+C C F+ H++ H + F C +CD +
Sbjct: 21 PYRCIDCNKSFSQAANLTAHVRTH--SGEKPFRCPVCDRRFSQ------------SSSVT 66
Query: 264 XXXXXXXKHNKPTCDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSH 323
C LC F +S+L H+ P Y C+LC + L+ H
Sbjct: 67 THMRTHSGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKP--YECKLCLLRFSQSGNLNRH 124
Query: 324 NSSAHGGGA 332
HG +
Sbjct: 125 -MRVHGAAS 132
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 37.5 bits (83), Expect = 6e-04
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 360 TSEYKFECADCEGKFANKQSLRSHIEWEHLLMRHHRCVKCDKVPVRNGTLR 410
T E FEC +C +F L++H+ H R +RC CD+ V+ LR
Sbjct: 5 TGEKPFECQECHKRFTRDHHLKTHMRL-HTGERPYRCEHCDRQFVQVANLR 54
Score = 36.7 bits (81), Expect = 0.001
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 328 HGGGAQYHTCRTHYRSHRALMHHLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHIEWE 387
H G + H R R HHLKTH T E + C C+ +F +LR H+
Sbjct: 4 HTGEKPFECQECHKRFTRD--HHLKTHM-RLHTGERPYRCEHCDRQFVQVANLRRHLR-V 59
Query: 388 HLLMRHHRCVKC 399
H R + C C
Sbjct: 60 HTGERPYGCEHC 71
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.003
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 15/116 (12%)
Query: 289 SLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSHNSSAHGGGAQYHTCR-----THYRS 343
SL++ + H T+ C+ C V +K +H S H + TC T Y+
Sbjct: 187 SLRVPKVNSHGKIK-TFKCKQCDFVAITKLEQWNH-SKVHIREDKRLTCPKCPFITEYKH 244
Query: 344 HRALMHHLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHIEWEHLLMRHHRCVKC 399
H L +HL+ H+ + F+C C+ NK L SH++ H + + C C
Sbjct: 245 H--LEYHLRNHAGSKP-----FQCNKCDYTCVNKSMLNSHMK-SHSNVYRYSCRDC 292
Score = 29.1 bits (62), Expect = 0.23
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 9/110 (8%)
Query: 277 CDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSHNSSAHGGGAQYHT 336
C C + +T H H C C + + K L H + H G +
Sbjct: 204 CKQCDFVAITKLEQWNHSKV-HIREDKRLTCPKCPFITEYKHHLEYHLRN-HAGSKPFQC 261
Query: 337 CRTHYRS-HRALMH-HLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHI 384
+ Y ++++++ H+K+HS + Y++ C DC SL+ H+
Sbjct: 262 NKCDYTCVNKSMLNSHMKSHS-----NVYRYSCRDCSYATKYCHSLKIHL 306
Score = 24.2 bits (50), Expect = 6.5
Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 204 PYKCDLCVVGFATETIYQGHIQKHHNKNKNGFSCDIC 240
P++C+ C +++ H++ H N + +SC C
Sbjct: 258 PFQCNKCDYTCVNKSMLNSHMKSHSNVYR--YSCRDC 292
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 34.7 bits (76), Expect = 0.005
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 203 LPYKCDLCVVGFATETIYQGHIQKHHNKNKNGFSCDICD 241
LP KC +C F+ + QGHI+ H + FSC C+
Sbjct: 6 LPCKCTICPKAFSRPWLLQGHIRTH--TGEKPFSCTYCN 42
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 34.7 bits (76), Expect = 0.005
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 277 CDLCGNIFVTNSSLKIHM-LTKHK-PTPVTYNCELCAKVYKSKSGLHSH 323
C +CG F T +LK HM + + K P V + C +C K + + L H
Sbjct: 165 CKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQH 213
Score = 33.1 bits (72), Expect = 0.014
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 307 CELCAKVYKSKSGLHSHNSSAHGGGAQYHT--CRTHYRSHRALMHHLKTHSAHRDTSEYK 364
C +C +V KS L H + H G + C + + L H+ H A +
Sbjct: 137 CVICHRVLSCKSALQMHYRT-HTGERPFKCKICGRAFTTKGNLKTHMGVHRA-KPPMRVL 194
Query: 365 FECADCEGKFANKQSLRSHI 384
+C C KF N L+ HI
Sbjct: 195 HQCPVCHKKFTNALVLQQHI 214
Score = 32.3 bits (70), Expect = 0.024
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 277 CDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSHNSSAHGGGA---- 332
C +C + S+L++H T P + C++C + + +K L +H H
Sbjct: 137 CVICHRVLSCKSALQMHYRTHTGERP--FKCKICGRAFTTKGNLKTH-MGVHRAKPPMRV 193
Query: 333 --QYHTCRTHYRSHRALMHHLKTHS 355
Q C + + L H++ H+
Sbjct: 194 LHQCPVCHKKFTNALVLQQHIRLHT 218
Score = 28.3 bits (60), Expect = 0.40
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Query: 346 ALMHHLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHIEWEHLL--MR-HHRCVKCDK 401
AL H +TH T E F+C C F K +L++H+ MR H+C C K
Sbjct: 149 ALQMHYRTH-----TGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHK 202
Score = 23.8 bits (49), Expect = 8.5
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 204 PYKCDLCVVGFATETIYQGHIQKHHNK 230
P+KC +C F T+ + H+ H K
Sbjct: 162 PFKCKICGRAFTTKGNLKTHMGVHRAK 188
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 34.7 bits (76), Expect = 0.005
Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 271 KHNKPTCDL--CGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSHNSSAH 328
K N +C + CG ++ S LK H+ P N C K + L H H
Sbjct: 311 KKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRH-LRTH 369
Query: 329 GGGAQY--HTCRTHYRSHRALMHHLKTHSAHRDTSEYKFECADCE 371
G ++ C + L H+KTH+ + C+D E
Sbjct: 370 TGEKRFACPICNKRFMRSDHLAKHVKTHNGNGKKGS-SDSCSDSE 413
Score = 34.3 bits (75), Expect = 0.006
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Query: 305 YNCEL--CAKVYKSKSGLHSH---NSSAHGGGAQYHTCRTHYRSHRALMHHLKTHSAHRD 359
++C + C KVY S L +H ++ + C + L HL+TH
Sbjct: 315 HSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTH----- 369
Query: 360 TSEYKFECADCEGKFANKQSLRSHIE 385
T E +F C C +F L H++
Sbjct: 370 TGEKRFACPICNKRFMRSDHLAKHVK 395
Score = 25.4 bits (53), Expect = 2.8
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 205 YKCDLCVVGFATETIYQGHIQKHHNKNKNGFSCDICDSVLNS 246
+ C +C F H++ H+ K G S DS NS
Sbjct: 375 FACPICNKRFMRSDHLAKHVKTHNGNGKKGSSDSCSDSEENS 416
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 32.7 bits (71), Expect = 0.018
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 277 CDLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSH 323
C C F + +L IH T P Y+C++C K ++ + L H
Sbjct: 82 CKYCNRQFTKSYNLLIHERTHTDERP--YSCDICGKAFRRQDHLRDH 126
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 31.1 bits (67), Expect = 0.056
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 349 HHLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHIEWEHLLMRHHRCVKC 399
HHL+ H + S+ F+C C+ NK L SH++ H + + C C
Sbjct: 2 HHLEYHLRNHAGSK-PFQCNKCDYTCVNKSMLNSHMK-SHSNVYRYSCRDC 50
Score = 25.0 bits (52), Expect = 3.7
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 328 HGGGAQYHTCRTHYRS-HRALMH-HLKTHSAHRDTSEYKFECADCEGKFANKQSLRSHI 384
H G + + Y ++++++ H+K+HS + Y++ C DC SL+ H+
Sbjct: 11 HAGSKPFQCNKCDYTCVNKSMLNSHMKSHS-----NVYRYSCRDCSYATKYCHSLKIHL 64
Score = 24.2 bits (50), Expect = 6.5
Identities = 9/37 (24%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 204 PYKCDLCVVGFATETIYQGHIQKHHNKNKNGFSCDIC 240
P++C+ C +++ H++ H N + +SC C
Sbjct: 16 PFQCNKCDYTCVNKSMLNSHMKSHSNVYR--YSCRDC 50
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 27.5 bits (58), Expect = 0.69
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 11 KVEKSTL-ALNNKVSSGNEGVTFRDCDVNYKPKLSITKCQTLADI-KVEDD 59
K +K L A K S+GN+ R C +PK + C D+ ++DD
Sbjct: 171 KYKKEDLPAAAGKASNGNKCCCLRTCSSAKRPKFENSSCDEDIDVTNIDDD 221
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 25.4 bits (53), Expect = 2.8
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 278 DLCGNIFVTNSSLKIHMLTKHKPTPVTYNCELCAKVYKSKSGLHSHNSSAHGGG---AQY 334
+L N+ +T +KI + + + + + ++ N H G AQ+
Sbjct: 275 ELARNLNLTERQVKIWFQNRRMKNKKNSQRQAAQQQNNNNAATNNQNHHHHAGHHIHAQH 334
Query: 335 HTCRTHYRSHRALMHH 350
H H ++ +L HH
Sbjct: 335 HVVNHHVAANGSLKHH 350
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 25.0 bits (52), Expect = 3.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 360 TSEYKFECADCEGKFANKQSLRSHIEWEHLL 390
TS+ +CA C+ F +K + R H+ H +
Sbjct: 1049 TSDSIMKCAFCDTPFISKGAYRHHLSKMHFV 1079
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 24.6 bits (51), Expect = 4.9
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 781 MPPIVQDYGDMPDIPDSILFNPSTPSVSLLRSDVVTPNFSSERDAASPSILS-FRRSECS 839
+PP+ G P P +++ N + +S D +PN R+ SPS L+ + C
Sbjct: 114 VPPLTPSPGP-PSHPYTVISNGYSSPMSSGSYDPYSPNGKIGREDLSPSSLNGYSADSCD 172
Query: 840 S 840
S
Sbjct: 173 S 173
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.317 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 315,804
Number of Sequences: 317
Number of extensions: 13198
Number of successful extensions: 63
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 46
length of query: 1427
length of database: 114,650
effective HSP length: 66
effective length of query: 1361
effective length of database: 93,728
effective search space: 127563808
effective search space used: 127563808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)
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