Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001656-TA|BGIBMGA001656-PA|IPR007087|Zinc finger,
C2H2-type
(324 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 52 7e-07
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 42 4e-04
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 42 6e-04
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 42 7e-04
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 40 0.002
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 40 0.002
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 39 0.004
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 39 0.005
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 39 0.005
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 39 0.005
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 38 0.009
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 37 0.016
At4g02200.2 68417.m00295 drought-responsive family protein simil... 37 0.016
At4g02200.1 68417.m00294 drought-responsive family protein simil... 37 0.016
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 37 0.016
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 37 0.016
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 37 0.021
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 37 0.021
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 37 0.021
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 36 0.028
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 36 0.028
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 36 0.037
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 36 0.049
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 36 0.049
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 35 0.064
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 35 0.064
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 35 0.085
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 35 0.085
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 35 0.085
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 34 0.11
At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein ... 34 0.15
At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein ... 34 0.15
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 34 0.15
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 34 0.15
At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein ... 34 0.15
At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein ... 34 0.15
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 34 0.15
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 33 0.20
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 33 0.26
At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein ... 33 0.34
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 33 0.34
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 33 0.34
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 33 0.34
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 32 0.45
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 32 0.45
At4g08460.2 68417.m01397 expressed protein 32 0.45
At4g08460.1 68417.m01396 expressed protein 32 0.45
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 32 0.45
At4g21030.1 68417.m03042 Dof-type zinc finger domain-containing ... 32 0.60
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 31 0.79
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 31 0.79
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 31 0.79
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 31 1.0
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 31 1.0
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 31 1.0
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 31 1.0
At2g21840.1 68415.m02595 CHP-rich zinc finger protein, putative 31 1.4
At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein ... 31 1.4
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 31 1.4
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 30 1.8
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 30 1.8
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 30 1.8
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 30 1.8
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ... 30 2.4
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 30 2.4
At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein ... 30 2.4
At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein ... 30 2.4
At4g21050.1 68417.m03044 Dof-type zinc finger domain-containing ... 30 2.4
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 30 2.4
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 30 2.4
At1g72270.1 68414.m08355 expressed protein 30 2.4
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 30 2.4
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 30 2.4
At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putat... 29 3.2
At5g18260.1 68418.m02146 expressed protein 29 3.2
At4g39140.4 68417.m05544 expressed protein 29 3.2
At4g39140.3 68417.m05543 expressed protein 29 3.2
At4g39140.2 68417.m05542 expressed protein 29 3.2
At4g39140.1 68417.m05541 expressed protein 29 3.2
At5g37910.1 68418.m04567 seven in absentia (SINA) family protein... 29 4.2
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 29 4.2
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 29 4.2
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 29 4.2
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 29 4.2
At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 29 5.6
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 29 5.6
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 29 5.6
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 29 5.6
At4g14780.1 68417.m02273 protein kinase, putative similar to pro... 29 5.6
At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein ... 29 5.6
At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ... 29 5.6
At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein ... 29 5.6
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 28 7.4
At5g53860.1 68418.m06697 expressed protein 28 7.4
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 28 7.4
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 28 7.4
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 28 7.4
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 28 7.4
At5g61190.1 68418.m07676 zinc finger protein-related contains Pf... 28 9.7
At4g39280.1 68417.m05563 phenylalanyl-tRNA synthetase, putative ... 28 9.7
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 28 9.7
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 28 9.7
At3g45555.1 68416.m04920 zinc finger (C3HC4-type RING finger) fa... 28 9.7
At2g26050.1 68415.m03128 hypothetical protein 28 9.7
At1g77770.2 68414.m09056 expressed protein 28 9.7
At1g77770.1 68414.m09055 expressed protein 28 9.7
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 51.6 bits (118), Expect = 7e-07
Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 10/172 (5%)
Query: 109 DHCKKTFVNKSTLVTHLKLH-DGPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYEC--E 165
D C KTF + S L H +H + D+ K + S++LK H H + Y C E
Sbjct: 84 DGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYE 143
Query: 166 ECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHK 225
C K FS ++H+K H+ E P C K Y + +++H H +
Sbjct: 144 GCGKAFSLDFNLRSHMK---THSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGE 200
Query: 226 CPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGM--CRKRFTDKKALTQH 275
P P VK V G ++P +AC C K + + L H
Sbjct: 201 TPKYTPPAEKVLRTVKTPATVCGPSSDRP--YACPYEGCEKAYIHEYKLKLH 250
Score = 37.9 bits (84), Expect = 0.009
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 229 CEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTC- 287
C K + + KH +HGE++ CG K+F D L +H +IH+ ER C
Sbjct: 86 CGKTFFDVSALRKH-SHIHGERQYVCDQEGCG---KKFLDSSKLKRHYLIHTGERNYICT 141
Query: 288 -DICQQTFKQKASLYTHKK 305
+ C + F +L +H K
Sbjct: 142 YEGCGKAFSLDFNLRSHMK 160
Score = 27.9 bits (59), Expect = 9.7
Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
Query: 84 CDMFFKSTRARKTHVARYHREGLQCDH--CKKTFVNKSTLVTHLKLHDGPLPRDECPI-- 139
C F A + H + CD C K F++ S L H +H G C
Sbjct: 86 CGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGE-RNYICTYEG 144
Query: 140 CHKMVR-STQLKYHVQRHKSKSRYEC--EECNKVFSHLATYQAHL-KYARAHATEQVLKY 195
C K L+ H++ H ++ + C C K ++H + H+ Y + + KY
Sbjct: 145 CGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETPKY 204
Query: 196 PCP 198
P
Sbjct: 205 TPP 207
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
Query: 157 KSKSRYECEECNKVFSHLATYQAHLK-YARAHATEQVLKYPCPMCNKGYPTKEAMQDHFN 215
+S S + C+EC F AHLK + ++H+ E+ C Y K+ + H
Sbjct: 61 ESSSNHTCQECGAEFKK----PAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHL- 115
Query: 216 YQHLGKTAHKCPV--CEKPIASRANVVKHVMRVHGEKKEKPRNHACG 260
H GK KCP C+ + + NV +HV + H N G
Sbjct: 116 LTHKGK-LFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLG 161
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 251 KEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTC--DICQQTFKQK----ASLYTHK 304
+E NH C C F L QH HS ER TC D C ++++K L THK
Sbjct: 60 EESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHK 119
Query: 305 KRVHK 309
++ K
Sbjct: 120 GKLFK 124
Score = 36.3 bits (80), Expect = 0.028
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Query: 111 CKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKS-----RYECE 165
C K F N+ L +H++ + C IC +K H++ H S + E E
Sbjct: 254 CMKYFTNEECLKSHIRSCHQHI---NCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVE 310
Query: 166 ECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFN 215
C+ FS + Q H+K V + P C + K H N
Sbjct: 311 GCSSTFSKASNLQKHMKAVHDDIRPFVCGF--PGCGMRFAYKHVRNKHEN 358
Score = 33.5 bits (73), Expect = 0.20
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 14/136 (10%)
Query: 147 TQLKYHVQRHKSKSRYE--CEE--CNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNK 202
+QL+ H H E C E C K F++ ++H++ H ++ C +
Sbjct: 230 SQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEI----CGSKHL 285
Query: 203 GYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGM- 261
K ++ H G+ + C + +N+ KH+ VH + R CG
Sbjct: 286 KKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVH----DDIRPFVCGFP 341
Query: 262 -CRKRFTDKKALTQHE 276
C RF K +HE
Sbjct: 342 GCGMRFAYKHVRNKHE 357
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 79 YKCLECDMFFKSTRARKTHVARYHRE-GLQC--DHCKKTFVNKSTLVTHLKLHDGPL--- 132
+ C EC FK K H+ + E C D C ++ K L HL H G L
Sbjct: 66 HTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKC 125
Query: 133 PRDEC 137
P++ C
Sbjct: 126 PKENC 130
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 10/114 (8%)
Query: 200 CNKGYPTKEAMQDHFN-YQHLGKTAHKC--PVCEKPIASRANVVKHVMRVHGEKKEKPRN 256
C K + +Q H + + L C P C K + + H+ H +
Sbjct: 222 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCH----QHINC 277
Query: 257 HACGMCRKRFTDKKALTQHEVIHSRERPLTCDI--CQQTFKQKASLYTHKKRVH 308
CG + K+ L H+ S + C++ C TF + ++L H K VH
Sbjct: 278 EICGSKHLKKNIKRHLRTHDE-DSSPGEIKCEVEGCSSTFSKASNLQKHMKAVH 330
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 195 YPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKP 254
Y C +C K +P+ +A+ H KT+H+ PV S V + +G +
Sbjct: 94 YKCSVCGKSFPSYQALGGH-------KTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSG 146
Query: 255 RNHACGMCRKRFTDKKALTQHEVIH 279
+ H C +C K F +AL H+ H
Sbjct: 147 KTHNCSICFKSFPSGQALGGHKRCH 171
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 12/96 (12%)
Query: 153 VQRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQD 212
+ R +K RY+CE C KVF +YQA + +H +V NK E D
Sbjct: 164 INRATTKGRYKCETCGKVFK---SYQALGGHRASHKKNRVSN------NKTEQRSETEYD 214
Query: 213 HFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHG 248
N + K H+CP+C + AS + H R HG
Sbjct: 215 --NVVVVAKRIHECPICLRVFASGQALGGH-KRSHG 247
Score = 29.5 bits (63), Expect = 3.2
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 71 LSKTTIEG-YKCLECDMFFKSTRARKTHVARYHREGLQCDHCKKTFVNK--STLVTHLKL 127
+++ T +G YKC C FKS +A H A + + + + ++ + + +V ++
Sbjct: 164 INRATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRI 223
Query: 128 HDGPLPRDECPICHKMVRSTQ-LKYHVQRH 156
H ECPIC ++ S Q L H + H
Sbjct: 224 H-------ECPICLRVFASGQALGGHKRSH 246
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 40.3 bits (90), Expect = 0.002
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 27/131 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDHFNYQHL-------------GKTAHKCPV--CEKPIASRA- 237
++ C +CNKG+ + +Q H +L K + CP+ C ASRA
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDASRAL 140
Query: 238 ----NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQT 293
+ KH R HGEKK K C C K++ + H R CD C
Sbjct: 141 GDLTGIKKHYSRKHGEKKWK-----CEKCSKKYAVQSDWKAHAKT-CGTREYKCD-CGTL 193
Query: 294 FKQKASLYTHK 304
F +K S TH+
Sbjct: 194 FSRKDSFITHR 204
Score = 32.3 bits (70), Expect = 0.45
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 144 TGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAK 179
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDHFNYQHL------------GKTAHKCPV--CEKPIASRA-- 237
++ C +CNKG+ + +Q H +L K + CPV C SRA
Sbjct: 60 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSRALG 119
Query: 238 ---NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTF 294
+ KH R HGEKK K C C K++ + H I + CD C F
Sbjct: 120 DLTGIKKHFCRKHGEKKWK-----CEKCSKKYAVQSDWKAHSKI-CGTKEYKCD-CGTLF 172
Query: 295 KQKASLYTHK 304
++ S TH+
Sbjct: 173 SRRDSFITHR 182
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 122 TGIKKHFCRKHGEKKWKCEKCSKKYAVQSDWKAHSK 157
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 108 CDHCKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYECEEC 167
C +C KTF + L H+++H K + Q K Q+HK + + C EC
Sbjct: 11 CKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVD-QRKMMAQKHKQQQQVGCREC 69
Query: 168 NKVFSHLATYQAHL 181
+VF L + H+
Sbjct: 70 GRVFVSLKALRGHM 83
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 38.7 bits (86), Expect = 0.005
Identities = 41/145 (28%), Positives = 53/145 (36%), Gaps = 20/145 (13%)
Query: 160 SRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFNYQHL 219
+R+ CE CNK F Q H R H P + K TKE +
Sbjct: 80 NRFVCEICNKGFQRDQNLQLH---RRGH------NLPWKLKQKN--TKEQQKKKVYVCPE 128
Query: 220 GKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIH 279
AH P + + + KH R HGEKK K C C K + + H I
Sbjct: 129 TNCAHHHP--SRALGDLTGIKKHFCRKHGEKKWK-----CEKCSKFYAVQSDWKAHTKI- 180
Query: 280 SRERPLTCDICQQTFKQKASLYTHK 304
R CD C F +K + TH+
Sbjct: 181 CGTRDYRCD-CGTLFSRKDTFITHR 204
Score = 31.5 bits (68), Expect = 0.79
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 144 TGIKKHFCRKHGEKKWKCEKCSKFYAVQSDWKAHTK 179
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 38.7 bits (86), Expect = 0.005
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 226 CPV--CEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRER 283
CP+ C K S +V+H RVH + ++P C+ F + T+H +H+ R
Sbjct: 1262 CPIKGCGKNFFSHKYLVQH-QRVHSD--DRPLKCPWKGCKMTFKWAWSRTEHIRVHTGAR 1318
Query: 284 PLTC--DICQQTFKQKASLYTHKKRV-HKVVPNKK 315
P C C QTF+ + HK++ H V K
Sbjct: 1319 PYVCAEPDCGQTFRFVSDFSRHKRKTGHSVKKTNK 1353
Score = 33.5 bits (73), Expect = 0.20
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 79 YKC-LE-CDMFFKSTRARKTHVARYHREGLQCDHCKKTFVNKSTLVTHLKLH--DGPL-- 132
Y+C +E C M F S + H R C K F + LV H ++H D PL
Sbjct: 1237 YQCNMEGCTMSFSSEKQLMLH----KRNICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKC 1292
Query: 133 PRDECPICHKMVRSTQLKYHVQRHKSKSRYECEE--CNKVFSHLATYQAHLKYARAHATE 190
P C + K S H++ H Y C E C + F ++ + H K H+ +
Sbjct: 1293 PWKGCKMTFKWAWSR--TEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRH-KRKTGHSVK 1349
Query: 191 QVLK 194
+ K
Sbjct: 1350 KTNK 1353
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 38.7 bits (86), Expect = 0.005
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDH-------------FNYQHLGKTAHKCP--VCEKPIASRA- 237
++ C +CNKG+ + +Q H N + + K + CP C +RA
Sbjct: 67 RFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVHHDPARAL 126
Query: 238 ----NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQT 293
+ KH R HGEKK K C C K++ H I + CD C
Sbjct: 127 GDLTGIKKHFSRKHGEKKWK-----CDKCSKKYAVMSDWKAHSKI-CGTKEYRCD-CGTL 179
Query: 294 FKQKASLYTHK 304
F +K S TH+
Sbjct: 180 FSRKDSFITHR 190
Score = 32.3 bits (70), Expect = 0.45
Identities = 10/36 (27%), Positives = 24/36 (66%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++C++C+K ++ ++ ++AH K
Sbjct: 130 TGIKKHFSRKHGEKKWKCDKCSKKYAVMSDWKAHSK 165
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 37.9 bits (84), Expect = 0.009
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 26/130 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDHFNYQHL------------GKTAHKCP--VCEKPIASRA-- 237
++ C +CNKG+ + +Q H +L K + CP C SRA
Sbjct: 62 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSRALG 121
Query: 238 ---NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTF 294
+ KH R HGEKK K C C K++ + H I + CD C F
Sbjct: 122 DLTGIKKHFCRKHGEKKWK-----CDKCSKKYAVQSDWKAHSKI-CGTKEYKCD-CGTLF 174
Query: 295 KQKASLYTHK 304
++ S TH+
Sbjct: 175 SRRDSFITHR 184
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/36 (27%), Positives = 23/36 (63%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++C++C+K ++ + ++AH K
Sbjct: 124 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSK 159
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 37.1 bits (82), Expect = 0.016
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDH-------------FNYQHLGKTAHKCP--VCEKPIASRA- 237
++ C +CNKG+ ++ +Q H N + K + CP C +RA
Sbjct: 5 RFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDPARAL 64
Query: 238 ----NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQT 293
+ KH R HGEKK K C C K++ H I R CD C
Sbjct: 65 GDLTGIKKHFSRKHGEKKWK-----CDKCSKKYAVISDWKAHNKI-CGSREFRCD-CGTL 117
Query: 294 FKQKASLYTHK 304
F +K S +H+
Sbjct: 118 FSRKDSFISHR 128
Score = 31.9 bits (69), Expect = 0.60
Identities = 10/36 (27%), Positives = 24/36 (66%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++C++C+K ++ ++ ++AH K
Sbjct: 68 TGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNK 103
>At4g02200.2 68417.m00295 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 207
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 174 LATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFNYQH-LGKTAHKCPVCEKP 232
LA YQ+ E + YPCP C+ Y E + H + +H L CPVC +
Sbjct: 22 LAKYQSGSCIEFEDDDEMAVDYPCPFCSDDYDLVE-LCHHIDEEHQLDANNGICPVCSRR 80
Query: 233 IASRANVVKHVMRVH 247
+ + ++V H+ H
Sbjct: 81 V--KMHMVDHITTQH 93
>At4g02200.1 68417.m00294 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 214
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Query: 174 LATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFNYQH-LGKTAHKCPVCEKP 232
LA YQ+ E + YPCP C+ Y E + H + +H L CPVC +
Sbjct: 22 LAKYQSGSCIEFEDDDEMAVDYPCPFCSDDYDLVE-LCHHIDEEHQLDANNGICPVCSRR 80
Query: 233 IASRANVVKHVMRVH 247
+ + ++V H+ H
Sbjct: 81 V--KMHMVDHITTQH 93
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 37.1 bits (82), Expect = 0.016
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDH-------------FNYQHLGKTAHKCP--VCEKPIASRA- 237
++ C +CNKG+ + +Q H N + + K + CP C SRA
Sbjct: 98 RFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVHHDPSRAL 157
Query: 238 ----NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQT 293
+ KH R HGEKK K C C K++ + H + CD C
Sbjct: 158 GDLTGIKKHFCRKHGEKKWK-----CDKCSKKYAVQSDCKAHSKT-CGTKEYRCD-CGTL 210
Query: 294 FKQKASLYTHK 304
F ++ S TH+
Sbjct: 211 FSRRDSFITHR 221
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/36 (27%), Positives = 22/36 (61%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++C++C+K ++ + +AH K
Sbjct: 161 TGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSK 196
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 37.1 bits (82), Expect = 0.016
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 185 RAHATEQVLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVM 244
+ ATE+V C C++ + ++ + H +H KC VC K +++ + +V HV+
Sbjct: 5 KKRATEKVW---CYYCDREFDDEKILVQHQKAKHF-----KCHVCHKKLSTASGMVIHVL 56
Query: 245 RVHGEKKEKPRN 256
+VH E K N
Sbjct: 57 QVHKENVTKVPN 68
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 248 GEKKEKPRNHA-CGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKASLYTHKKR 306
G+KK++ C C + F D+K L QH+ + + C +C + + + H +
Sbjct: 2 GKKKKRATEKVWCYYCDREFDDEKILVQHQ----KAKHFKCHVCHKKLSTASGMVIHVLQ 57
Query: 307 VHK----VVPNKK 315
VHK VPN K
Sbjct: 58 VHKENVTKVPNAK 70
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 36.7 bits (81), Expect = 0.021
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 224 HKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSR-- 281
H+C C K R ++V+H M++ +PR CG+C K +++ +H +
Sbjct: 17 HRCVACYKMFNRREHLVEH-MKISYHSLHQPR---CGVCLKHCKSFESVREHLNVPDHLS 72
Query: 282 ----ERPLT---CDICQQTFKQKASLYTHKKRVHKVVP 312
+ T C +C Q F++ +L HK + H P
Sbjct: 73 KGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPP 110
Score = 31.9 bits (69), Expect = 0.60
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 154 QRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDH 213
+R K R+ C C K+F+ H+K + H+ Q C +C K + E++++H
Sbjct: 9 KRRKISVRHRCVACYKMFNRREHLVEHMKIS-YHSLHQP---RCGVCLKHCKSFESVREH 64
Query: 214 FNY-QHLGK-------TAHKCPVCEKPIASRANVVKHVMRVH 247
N HL K T C +C + + +H + H
Sbjct: 65 LNVPDHLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCH 106
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 193 LKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHV-MRVH---G 248
+++ C C K + +E + +H + +C VC K S +V +H+ + H G
Sbjct: 15 VRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKG 74
Query: 249 EKKEKPRNHACGMCRKRFTDKKALTQHE 276
K C +C + F + AL +H+
Sbjct: 75 NCKAIFTKRGCTLCLQIFEEAFALAEHK 102
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 107 QCDHCKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQ-LKYHVQRHKSKSRYECE 165
+C C K F + LV H+K+ L + C +C K +S + ++ H+ S+ C+
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 36.7 bits (81), Expect = 0.021
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 224 HKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSR-- 281
H+C C K R ++V+H M++ +PR CG+C K +++ +H +
Sbjct: 17 HRCVACYKMFNRREHLVEH-MKISYHSLHQPR---CGVCLKHCKSFESVREHLNVPDHLS 72
Query: 282 ----ERPLT---CDICQQTFKQKASLYTHKKRVHKVVP 312
+ T C +C Q F++ +L HK + H P
Sbjct: 73 KGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPP 110
Score = 31.9 bits (69), Expect = 0.60
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 154 QRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDH 213
+R K R+ C C K+F+ H+K + H+ Q C +C K + E++++H
Sbjct: 9 KRRKISVRHRCVACYKMFNRREHLVEHMKIS-YHSLHQP---RCGVCLKHCKSFESVREH 64
Query: 214 FNY-QHLGK-------TAHKCPVCEKPIASRANVVKHVMRVH 247
N HL K T C +C + + +H + H
Sbjct: 65 LNVPDHLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCH 106
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 193 LKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHV-MRVH---G 248
+++ C C K + +E + +H + +C VC K S +V +H+ + H G
Sbjct: 15 VRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKG 74
Query: 249 EKKEKPRNHACGMCRKRFTDKKALTQHE 276
K C +C + F + AL +H+
Sbjct: 75 NCKAIFTKRGCTLCLQIFEEAFALAEHK 102
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 107 QCDHCKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQ-LKYHVQRHKSKSRYECE 165
+C C K F + LV H+K+ L + C +C K +S + ++ H+ S+ C+
Sbjct: 18 RCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCK 77
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 36.7 bits (81), Expect = 0.021
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDHFNYQHL---------GKTAHKCPVCEKPIA-----SRA-- 237
++ C +CNKG+ ++ +Q H +L + K +C +P SRA
Sbjct: 80 RFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPSRALG 139
Query: 238 ---NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTF 294
+ KH R HGEKK K C C KR+ + H + CD C F
Sbjct: 140 DLTGIKKHYYRKHGEKKWK-----CDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTLF 192
Query: 295 KQKASLYTHK 304
++ S TH+
Sbjct: 193 SRRDSFITHR 202
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/36 (27%), Positives = 23/36 (63%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++C++C+K ++ + ++AH K
Sbjct: 142 TGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK 177
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 36.3 bits (80), Expect = 0.028
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 26/130 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDHFNYQHL------------GKTAHKC--PVCEKPIASRA-- 237
++ C +CNKG+ ++ +Q H +L + + C P C SRA
Sbjct: 82 RFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPSRALG 141
Query: 238 ---NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTF 294
+ KH R HGEKK K C C KR+ + H + CD C F
Sbjct: 142 DLTGIKKHYYRKHGEKKWK-----CEKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIF 194
Query: 295 KQKASLYTHK 304
++ S TH+
Sbjct: 195 SRRDSYITHR 204
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 144 TGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSK 179
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 36.3 bits (80), Expect = 0.028
Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 10/110 (9%)
Query: 111 CKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKS-----RYECE 165
C K F N+ L +H++ + C IC +K H++ H S + E E
Sbjct: 166 CMKYFTNEECLKSHIRSCHQHI---NCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVE 222
Query: 166 ECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFN 215
C+ FS + Q H+K V + P C + K H N
Sbjct: 223 GCSSTFSKASNLQKHMKAVHDDIRPFVCGF--PGCGMRFAYKHVRNKHEN 270
Score = 33.5 bits (73), Expect = 0.20
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 14/136 (10%)
Query: 147 TQLKYHVQRHKSKSRYE--CEE--CNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNK 202
+QL+ H H E C E C K F++ ++H++ H ++ C +
Sbjct: 142 SQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEI----CGSKHL 197
Query: 203 GYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGM- 261
K ++ H G+ + C + +N+ KH+ VH + R CG
Sbjct: 198 KKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVH----DDIRPFVCGFP 253
Query: 262 -CRKRFTDKKALTQHE 276
C RF K +HE
Sbjct: 254 GCGMRFAYKHVRNKHE 269
Score = 29.5 bits (63), Expect = 3.2
Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 10/114 (8%)
Query: 200 CNKGYPTKEAMQDHFN-YQHLGKTAHKC--PVCEKPIASRANVVKHVMRVHGEKKEKPRN 256
C K + +Q H + + L C P C K + + H+ H +
Sbjct: 134 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCH----QHINC 189
Query: 257 HACGMCRKRFTDKKALTQHEVIHSRERPLTCDI--CQQTFKQKASLYTHKKRVH 308
CG + K+ L H+ S + C++ C TF + ++L H K VH
Sbjct: 190 EICGSKHLKKNIKRHLRTHDE-DSSPGEIKCEVEGCSSTFSKASNLQKHMKAVH 242
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 35.9 bits (79), Expect = 0.037
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 140 CHKMVRSTQLKYHVQR-HKSKSRYECEECNKVFSHLATYQAHLK 182
CH + +K H +R H + ++ CE C+K ++ + Y+AHLK
Sbjct: 122 CHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLK 165
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 287 CDICQQTFKQKASLYTHKKRVHKV 310
C+IC Q F++ +L H++R HKV
Sbjct: 69 CEICNQGFQRDQNLQMHRRR-HKV 91
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 35.5 bits (78), Expect = 0.049
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 140 CHKMVRSTQLKYHVQR-HKSKSRYECEECNKVFSHLATYQAHLK 182
CH + +K H +R H + ++ CE C+K ++ + Y+AHLK
Sbjct: 125 CHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQSDYKAHLK 168
Score = 31.1 bits (67), Expect = 1.0
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 23/132 (17%)
Query: 161 RYECEECNKVFSHLATYQAH-------LKYARAHATEQVLK--YPC--PMCNKGYPTKE- 208
RY CE CN+ F Q H K + E+V K Y C P C P
Sbjct: 69 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHAL 128
Query: 209 ----AMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRK 264
++ HF +H + HK +CE+ S+ V+ + H K R H+C C +
Sbjct: 129 GDLVGIKKHFRRKH---SNHKQWICER--CSKGYAVQSDYKAH-LKTCGTRGHSCD-CGR 181
Query: 265 RFTDKKALTQHE 276
F+ ++ +H+
Sbjct: 182 VFSRVESFIEHQ 193
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 287 CDICQQTFKQKASLYTHKKRVHKV 310
C+IC Q F++ +L H++R HKV
Sbjct: 72 CEICNQGFQRDQNLQMHRRR-HKV 94
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 35.5 bits (78), Expect = 0.049
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 26/130 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDHFNYQHL---------GKTAHKCPVCEKP----------IA 234
++ C +CNKG+ ++ +Q H +L + K +C +P +
Sbjct: 81 RFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPARALG 140
Query: 235 SRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTF 294
+ KH R HGEKK K C C KR+ + H + CD C F
Sbjct: 141 DLTGIKKHYYRKHGEKKWK-----CDKCSKRYAVQSDWKAHSKT-CGTKEYRCD-CGTIF 193
Query: 295 KQKASLYTHK 304
++ S TH+
Sbjct: 194 SRRDSYITHR 203
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/36 (27%), Positives = 23/36 (63%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++C++C+K ++ + ++AH K
Sbjct: 143 TGIKKHYYRKHGEKKWKCDKCSKRYAVQSDWKAHSK 178
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 35.1 bits (77), Expect = 0.064
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 26/130 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDHFNYQHLG------------KTAHKCP--VCEKPIASRA-- 237
++ C +C KG+ + +Q H +L K + CP C +SRA
Sbjct: 65 RFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHSSRALG 124
Query: 238 ---NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTF 294
+ KH R HGEKK C C KR+ + H R CD C F
Sbjct: 125 DLTGIKKHFCRKHGEKK-----WTCEKCAKRYAVQSDWKAHSKT-CGTREYRCD-CGTIF 177
Query: 295 KQKASLYTHK 304
++ S TH+
Sbjct: 178 SRRDSFITHR 187
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + ++ CE+C K ++ + ++AH K
Sbjct: 127 TGIKKHFCRKHGEKKWTCEKCAKRYAVQSDWKAHSK 162
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 35.1 bits (77), Expect = 0.064
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 140 CHKMVRSTQLKYHVQR-HKSKSRYECEECNKVFSHLATYQAHLKY--ARAHATE 190
CH + +K H +R H ++ CE C+K ++ + Y+AHLK +R H+ +
Sbjct: 95 CHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGHSCD 148
Score = 29.5 bits (63), Expect = 3.2
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 24/133 (18%)
Query: 161 RYECEECNKVFSHLATYQAHLK--------YARAHATEQVLK--YPC--PMCNKGYPTKE 208
RY CE CN+ F Q H + R E+V K Y C P C P
Sbjct: 38 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKRVYVCPEPTCLHHDPCHA 97
Query: 209 -----AMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCR 263
++ HF +H + HK VCE+ S+ V+ + H K R H+C C
Sbjct: 98 LGDLVGIKKHFRRKH---SVHKQWVCER--CSKGYAVQSDYKAH-LKTCGSRGHSCD-CG 150
Query: 264 KRFTDKKALTQHE 276
+ F+ ++ +H+
Sbjct: 151 RVFSRVESFIEHQ 163
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 287 CDICQQTFKQKASLYTHKKRVHKV 310
C+IC Q F++ +L H++R HKV
Sbjct: 41 CEICNQGFQRDQNLQMHRRR-HKV 63
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 34.7 bits (76), Expect = 0.085
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 229 CEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTC- 287
C K + +V H RVH K E+P + C F + A T+H +H+ ERP C
Sbjct: 1245 CGKKFRAHKYLVLH-QRVH--KDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYICK 1301
Query: 288 -DICQQTFKQKASLYTHKKR 306
D C +F+ + H+++
Sbjct: 1302 VDGCGLSFRFVSDYSRHRRK 1321
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 262 CRKRFTDKKALTQHEVIHSRERPLTCDI--CQQTFKQKASLYTHKKRVH 308
C K+F K L H+ +H ERP C C TFK + + H R+H
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEH-LRLH 1292
Score = 28.7 bits (61), Expect = 5.6
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
Query: 96 THVARYHREGLQCDHCKKTFVNKSTLVTHLK---LHDGPLPRDECPICHKMVRSTQ-LKY 151
TH R + EG CK TF +K+ L TH + H+G C K R+ + L
Sbjct: 1212 THPNRCYLEG-----CKMTFESKAKLQTHKRNRCTHEG---------CGKKFRAHKYLVL 1257
Query: 152 HVQRHKSKSRYEC--EECNKVFSHLATYQAHLK 182
H + HK + +EC + C+ F HL+
Sbjct: 1258 HQRVHKDERPFECSWKGCSMTFKWQWARTEHLR 1290
Score = 28.3 bits (60), Expect = 7.4
Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 74 TTIEGYKC-LE-CDMFFKSTRARKTHVARYHREGLQCDH--CKKTFVNKSTLVTHLKLHD 129
TT +C LE C M F+S +TH +C H C K F LV H ++H
Sbjct: 1210 TTTHPNRCYLEGCKMTFESKAKLQTHKRN------RCTHEGCGKKFRAHKYLVLHQRVHK 1263
Query: 130 GPLPRDECPI--CHKMVRSTQLK-YHVQRHKSKSRYEC--EECNKVFSHLATYQAHLKYA 184
P EC C + + H++ H + Y C + C F ++ Y H +
Sbjct: 1264 DERP-FECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRRKT 1322
Query: 185 RAHAT 189
+ T
Sbjct: 1323 MHYVT 1327
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 34.7 bits (76), Expect = 0.085
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 254 PRNHACGMCRKRFTDKKALTQHEVIHSRER 283
P+N+ C CR+ F +AL H +H R+R
Sbjct: 46 PKNYTCSFCRREFRSAQALGGHMNVHRRDR 75
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 34.7 bits (76), Expect = 0.085
Identities = 35/131 (26%), Positives = 51/131 (38%), Gaps = 27/131 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDH-------------FNYQHLGKTAHKCPV--CEKPIASRA- 237
++ C +CNKG+ + +Q H N + K + CP C SRA
Sbjct: 91 RFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPSRAL 150
Query: 238 ----NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQT 293
+ KH R HGEKK K C C K++ + H + CD C
Sbjct: 151 GDLTGIKKHFFRKHGEKKWK-----CEKCSKKYAVQSDWKAHAKT-CGTKEYKCD-CGTL 203
Query: 294 FKQKASLYTHK 304
F ++ S TH+
Sbjct: 204 FSRRDSFITHR 214
Score = 31.1 bits (67), Expect = 1.0
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++CE+C+K ++ + ++AH K
Sbjct: 154 TGIKKHFFRKHGEKKWKCEKCSKKYAVQSDWKAHAK 189
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 252 EKPRNHACGMCRKRFTDKKALTQHEVIHSRER 283
E R + C +C++ FT+ +AL H IH RER
Sbjct: 16 ENRRTYDCDICKRGFTNPQALGGHNNIHRRER 47
>At4g17810.1 68417.m02657 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 180
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 254 PRNHACGMCRKRFTDKKALTQHEVIHSRER 283
PR++ C CR+ F +AL H +H R+R
Sbjct: 37 PRSYTCNFCRREFRSAQALGGHMNVHRRDR 66
>At2g47090.1 68415.m05882 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type, domain
Length = 745
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 204 YPTKEAMQDHFNYQH------LGKTAHKCPVCEKPIASRANVVKHV----MRVHGEKKEK 253
+ + E ++DH N+QH L K +CE+ + ++ + +H+ V G + E+
Sbjct: 132 FKSVEHLKDHLNHQHKLHMCSLCLVGRKVFICEQKLFTKGQLNQHISSGDSEVDGSESER 191
Query: 254 ---PRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQ 292
+ C C++ F L H SRE TC ICQ+
Sbjct: 192 GGFTGHPMCEFCKRPFYGDNELYTH---MSREH-YTCHICQR 229
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 33.9 bits (74), Expect = 0.15
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 16/93 (17%)
Query: 157 KSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTK-EAMQDHFN 215
KS+ R++CE C KVF +YQA + +H NK TK E ++ +
Sbjct: 189 KSRGRFKCETCGKVFK---SYQALGGHRASHKK-----------NKACMTKTEQVETEYV 234
Query: 216 YQHLGKTAHKCPVCEKPIASRANVVKHVMRVHG 248
K H+CP+C + S + H R HG
Sbjct: 235 LGVKEKKVHECPICFRVFTSGQALGGH-KRSHG 266
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 79 YKCLECDMFFKSTRARKTHVARYHREGLQCDHCKKTFVNKSTL-VTHLKLHDGPLPRDEC 137
+KC C FKS +A H A H++ C + + L V K+H EC
Sbjct: 194 FKCETCGKVFKSYQALGGHRAS-HKKNKACMTKTEQVETEYVLGVKEKKVH-------EC 245
Query: 138 PICHKMVRSTQ-LKYHVQRHKS 158
PIC ++ S Q L H + H S
Sbjct: 246 PICFRVFTSGQALGGHKRSHGS 267
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 254 PRNHACGMCRKRFTDKKALTQHEVIHSRER 283
PR++ C CR+ F +AL H +H R+R
Sbjct: 36 PRSYTCSFCRREFKSAQALGGHMNVHRRDR 65
>At1g80730.1 68414.m09472 zinc finger (C2H2 type) family protein
(ZFP1) identical to zinc finger protein, ZFP1
gi|790673|gb|AAA87297; contains zinc finger, C2H2 type,
domain, Prosite:PS00028
Length = 228
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 249 EKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPL 285
E+ PR +C C+++F +AL H+ H RER L
Sbjct: 60 EQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 96
>At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein
(ZFP7) identical to zinc finger protein, ZFP7
gi|790685|gb|AAA87303; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 209
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 254 PRNHACGMCRKRFTDKKALTQHEVIHSRERPL 285
PR +C CR++F +AL H+ H RER +
Sbjct: 56 PRVFSCNYCRRKFYSSQALGGHQNAHKRERTM 87
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 33.9 bits (74), Expect = 0.15
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 26/130 (20%)
Query: 194 KYPCPMCNKGYPTKEAMQDHFNYQHLG------------KTAHKCPV--CEKPIASRA-- 237
++ C +C KG+ + +Q H +L K + CP C +RA
Sbjct: 69 RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTRALG 128
Query: 238 ---NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTF 294
+ KH R HGEKK K C C KR+ + H R CD C F
Sbjct: 129 DLTGIKKHFCRKHGEKKWK-----CEKCAKRYAVQSDWKAHSKT-CGTREYRCD-CGTIF 181
Query: 295 KQKASLYTHK 304
++ S TH+
Sbjct: 182 SRRDSFITHR 191
Score = 29.1 bits (62), Expect = 4.2
Identities = 11/36 (30%), Positives = 22/36 (61%)
Query: 147 TQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
T +K H R + +++CE+C K ++ + ++AH K
Sbjct: 131 TGIKKHFCRKHGEKKWKCEKCAKRYAVQSDWKAHSK 166
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 33.5 bits (73), Expect = 0.20
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 16/112 (14%)
Query: 143 MVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNK 202
MV+ L H + H S +++EC+ CNK FS ++QA + +H ++
Sbjct: 29 MVKQIGLNQHTESHTS-NQFECKTCNKRFS---SFQALGGHRASHKKPKL---------- 74
Query: 203 GYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKP 254
++ H + + G HKC +C + + + H+ R +P
Sbjct: 75 --TVEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHRSSMTVEP 124
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 178 QAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDH 213
QA + + A E + Y C +CNKGY + +A + H
Sbjct: 51 QAAIAQEKVKAVEAPMLYSCGICNKGYRSSKAHEQH 86
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 6/83 (7%)
Query: 197 CPMCNKGYPTKEAMQDHFNYQ-HLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKK---E 252
C CNK + + H+ + H K + P + A + EK E
Sbjct: 6 CNSCNKDFEDDAEQKFHYKSEWHRYNLKRK--IAGVPGVTEALFEARQAAIAQEKVKAVE 63
Query: 253 KPRNHACGMCRKRFTDKKALTQH 275
P ++CG+C K + KA QH
Sbjct: 64 APMLYSCGICNKGYRSSKAHEQH 86
>At5g57520.1 68418.m07187 zinc finger (C2H2 type) family protein
(ZFP2) identical to zinc finger protein 2 (ZFP2)
GI:790674 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 150
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 252 EKPRNHACGMCRKRFTDKKALTQHEVIHSRERPL 285
E+PR +C C+++F +AL H+ H ER L
Sbjct: 47 EQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTL 80
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 253 KPRNHACGMCRKRFTDKKALTQHEVIHSRERPL 285
K R AC C+K F+ +AL H+ H +ER L
Sbjct: 63 KARVFACTFCKKEFSTSQALGGHQNAHKQERSL 95
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 32.7 bits (71), Expect = 0.34
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 254 PRNHACGMCRKRFTDKKALTQHEVIHSRER 283
PR++ C C++ F +AL H +H R+R
Sbjct: 44 PRSYTCSFCKREFRSAQALGGHMNVHRRDR 73
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 32.7 bits (71), Expect = 0.34
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 193 LKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKC-PVCEKPIASRANVVKHVMRVHGEK- 250
L Y C +C K +P+ +A+ H K +H+ P + + + V GEK
Sbjct: 104 LPYKCNVCEKAFPSYQALGGH-------KASHRIKPPTVISTTADDSTAPTISIVAGEKH 156
Query: 251 --KEKPRNHACGMCRKRFTDKKALTQHEVIH 279
+ H C +C K F +AL H+ H
Sbjct: 157 PIAASGKIHECSICHKVFPTGQALGGHKRCH 187
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 107 QCDHCKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRS-TQLKYHVQRHKSKSRYECE 165
+C C + F K LV H+++ + C IC+K RS L+ H+ K +
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPK-----Q 61
Query: 166 ECNKVFS 172
EC +FS
Sbjct: 62 ECKNIFS 68
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 32.3 bits (70), Expect = 0.45
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 158 SKSRYECEECNKVF-SH--LATYQA-HLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDH 213
S R+EC C KVF SH L ++A H A V P + + + DH
Sbjct: 158 SIERFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTV------STSSGHDH 211
Query: 214 FNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKP 254
HKC +C + +S + H MR H EK+E+P
Sbjct: 212 QGKILTFSGHHKCNICFRVFSSGQALGGH-MRCHWEKEEEP 251
>At4g08460.2 68417.m01397 expressed protein
Length = 274
Score = 32.3 bits (70), Expect = 0.45
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 137 CPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYP 196
CP+C ++ ++ + HK Y C N+ + L Y+ YA+ +++ +
Sbjct: 49 CPVCLEVPHNSVVLLCSSYHKGCRPYMCATGNRFSNCLEQYKK--AYAKDEKSDKPPELL 106
Query: 197 CPMCN---KGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEK 253
CP+C KG+ E + + N + +C S + KHV H + K
Sbjct: 107 CPLCRGQVKGWTVVEKERKYLNSKKRSCMNDECLF----YGSYRQLKKHVKENH--PRAK 160
Query: 254 PR 255
PR
Sbjct: 161 PR 162
>At4g08460.1 68417.m01396 expressed protein
Length = 274
Score = 32.3 bits (70), Expect = 0.45
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 11/122 (9%)
Query: 137 CPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYP 196
CP+C ++ ++ + HK Y C N+ + L Y+ YA+ +++ +
Sbjct: 49 CPVCLEVPHNSVVLLCSSYHKGCRPYMCATGNRFSNCLEQYKK--AYAKDEKSDKPPELL 106
Query: 197 CPMCN---KGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEK 253
CP+C KG+ E + + N + +C S + KHV H + K
Sbjct: 107 CPLCRGQVKGWTVVEKERKYLNSKKRSCMNDECLF----YGSYRQLKKHVKENH--PRAK 160
Query: 254 PR 255
PR
Sbjct: 161 PR 162
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 32.3 bits (70), Expect = 0.45
Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 12/212 (5%)
Query: 107 QCDHCKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYECEE 166
+C C K+F L H ++H P+ V + K + S S YEC+
Sbjct: 44 KCKICGKSFECYQALGGHQRIHR-PIKEKLSKQEFSEVYPRKSKLQKRPESSSSCYECKV 102
Query: 167 CNKVFSHLATYQAHLKYARAHATEQV-LKYPCPMCNKGYPTKEAMQ-DHFNYQHLGKTAH 224
C K+F H K R+ E + + + K Q F K H
Sbjct: 103 CGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPSSFKVSQEEKFLH 162
Query: 225 KCPVCEKPIA---SRANVVKHVMRVHGEKKEKPRNHA-CGMCRKRFTDKKALTQHEVIHS 280
C ++ + S + + +R + K + ++ C +C K F + L H+ +H
Sbjct: 163 -CVELKQDFSEPLSHSGALPSTLRSKLQTKTQWKSSCHCKICGKSFVCSQGLGNHKRVH- 220
Query: 281 RERPLTCDI-CQQTFKQKASLYTHKKRVHKVV 311
R ++ + C++ + + + ++ + K+V
Sbjct: 221 --REISGKLACKRKYTEDYNPFSDSLKAKKIV 250
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 256 NHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKASLYTHKKRVHK 309
+H C +C K F +AL H+ IH RP+ + +Q F + +Y K ++ K
Sbjct: 42 SHKCKICGKSFECYQALGGHQRIH---RPIKEKLSKQEFSE---VYPRKSKLQK 89
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 67 LRRLLSKTTIEGYKCLECDMFFKSTRARKTHVARYHR 103
LRR L K + YKC C+ F ++A +H R HR
Sbjct: 433 LRRKLQKKSRSSYKCSICEKSFVCSQALGSH-QRLHR 468
Score = 27.9 bits (59), Expect = 9.7
Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 9/145 (6%)
Query: 157 KSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFNY 216
+SKS ++C+ C K F YQA + R H + K ++ YP K +Q
Sbjct: 38 QSKSSHKCKICGKSFE---CYQALGGHQRIHRPIKE-KLSKQEFSEVYPRKSKLQKR--- 90
Query: 217 QHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHE 276
+ ++C VC K + H K+E KK ++Q
Sbjct: 91 PESSSSCYECKVCGKIFGCYRGLGGHTKLHRSTKRELASTQDENSLLDSSEAKKIVSQPS 150
Query: 277 --VIHSRERPLTCDICQQTFKQKAS 299
+ E+ L C +Q F + S
Sbjct: 151 SFKVSQEEKFLHCVELKQDFSEPLS 175
>At4g21030.1 68417.m03042 Dof-type zinc finger domain-containing
protein prolamin box binding factor, Zea mays,
PID:g2393775
Length = 194
Score = 31.9 bits (69), Expect = 0.60
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 131 PLPRDECPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSH 173
P PR CP C+ T+ Y KS+ RY+C+ C + ++H
Sbjct: 18 PPPR-VCPRCYS--DQTRFSYFNNNKKSQPRYKCKNCCRCWTH 57
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 31.5 bits (68), Expect = 0.79
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 254 PRNHACGMCRKRFTDKKALTQHEVIHSRER 283
PR+++C C + F +AL H +H R+R
Sbjct: 52 PRSYSCSFCGREFKSAQALGGHMNVHRRDR 81
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 31.5 bits (68), Expect = 0.79
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 226 CPVCEKPIASRANVVKHVMRVHGEKKEKPRNH------ACGMCRKRFTDKKALTQH 275
CP C +S ++V+HV + H ++ K +NH C C + F D L H
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTH--ERNKKQNHGNVTVDVCPRCSRGFRDPVDLVNH 268
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 164 CEECNKVFSHLATYQAHLKYARAHATEQ----VLKYPCPMCNKGYPTKEAMQDHFNYQHL 219
C +C FS + + H++ +Q V CP C++G+ + +H H
Sbjct: 215 CPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVCPRCSRGFRDPVDLVNHIERDHR 274
Query: 220 G 220
G
Sbjct: 275 G 275
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 31.5 bits (68), Expect = 0.79
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 159 KSRYECEECNKVF-SH--LATYQA-HLKYARAHATEQVLKYPCPMCNKGYPTKEAM-QDH 213
+ R+EC+ C KVF SH L ++A H A + + + P P P +E + QD
Sbjct: 145 EERFECDGCKKVFGSHQALGGHRATHKDVKGCFANKNITEDPPPP-----PPQEIVDQDK 199
Query: 214 -FNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEK 253
+ + + H+C +C + +S + H MR H EK ++
Sbjct: 200 GKSVKLVSGMNHRCNICSRVFSSGQALGGH-MRCHWEKDQE 239
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 249 EKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRE 282
E++ + + H C C KRF KAL H+ IH E
Sbjct: 71 EEEGEEKKHICCECGKRFVSGKALGGHKRIHVLE 104
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 14/94 (14%)
Query: 195 YPCPMCNKGYPTKEAMQDH---FNYQHLGKTAHKCPVCEKPIASRANVVK---------- 241
Y C C+K + + +A+ H LG + KC + AS V+
Sbjct: 118 YQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTASASTVETVEAGAVGSFLSL 177
Query: 242 HVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQH 275
V G KK + + H C +C+ F+ +AL H
Sbjct: 178 QVTSSDGSKKPE-KTHECSICKAEFSSGQALGGH 210
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 249 EKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRE 282
E + R H C +C K+F+ KA H IHS E
Sbjct: 41 ESPQPQRKHFCVICEKQFSSGKAYGGHVRIHSIE 74
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 13/127 (10%)
Query: 195 YPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPV-----CEKPIASRANVVKHVMRVH-G 248
+ C +C + ++ ++ H +H + A KC + C + ++ HV VH
Sbjct: 496 FACAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHVQAVHPS 555
Query: 249 EKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLT-------CDICQQTFKQKASLY 301
E K C + F+ K +++ S+ T C C F L
Sbjct: 556 ECKSLTVASECNLTNGEFSQKPEAGSSQIVVSQNNENTSGVHKFVCKFCGLKFNLLPDLG 615
Query: 302 THKKRVH 308
H + H
Sbjct: 616 RHHQAEH 622
>At2g21840.1 68415.m02595 CHP-rich zinc finger protein, putative
Length = 746
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 245 RVHG--EKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKA 298
++HG ++ +K G+C DK +L Q VI SR P+TC IC + F KA
Sbjct: 499 KMHGALQRGQKIIGTWLGLC---IQDKHSLFQ--VIVSRSYPITCSICDEKFCGKA 549
>At1g66140.1 68414.m07506 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 260
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 232 PIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPL 285
P++S + + + R +C C+++F +AL H+ H RER L
Sbjct: 60 PLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 113
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 231 KPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDIC 290
KP+ + H R HG K AC MC K F K HE + + C C
Sbjct: 241 KPLKDFRTLQTHYKRKHGSKP-----FACRMCGKAFAVKGDWRTHE--KNCGKLWYCS-C 292
Query: 291 QQTFKQKASLYTHKK 305
FK K SL H K
Sbjct: 293 GSDFKHKRSLKDHVK 307
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 154 QRHKSKSRYECEECNKV---FSHLATYQAHLKYARAHATEQVL----------KYPCPMC 200
+R K +S+Y C+ C KV + L ++ KY R +++ +Y C +C
Sbjct: 220 KRGKKQSKYTCDTCGKVLRSYQALGGHRTSHKYKRLKISDKNYFGEDGPIVRRQYECQIC 279
Query: 201 NKGYPTKEAMQDH 213
N+ + + +A+ H
Sbjct: 280 NRMFASGQALGGH 292
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 30.3 bits (65), Expect = 1.8
Identities = 34/124 (27%), Positives = 43/124 (34%), Gaps = 11/124 (8%)
Query: 185 RAHATEQVLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAH--KCPVCEKPIASRANVVKH 242
R H Q L P P +K + Q Q + KC +CEK S + H
Sbjct: 152 RRHPQTQTLTRPQPQTHKTQLQRPPPQLQSQTQTAPPKSDLFKCSICEKVFTSYQALGGH 211
Query: 243 VMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKASLYT 302
H K + N K T K L+ IH CDIC F +L
Sbjct: 212 KAS-HSIKAAQLENAGADAGEK--TRSKMLSPSGKIHK------CDICHVLFPTGQALGG 262
Query: 303 HKKR 306
HK+R
Sbjct: 263 HKRR 266
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Query: 195 YPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKP 254
Y C +C + P+ +A+ H K +H+ KP A K MR KK P
Sbjct: 750 YQCNVCGRELPSYQALGGH-------KASHR----TKPPVENATGEK--MR---PKKLAP 793
Query: 255 --RNHACGMCRKRFTDKKALTQHEVIH 279
+ H C +C + F+ ++L H+ +H
Sbjct: 794 SGKIHKCSICHREFSTGQSLGGHKRLH 820
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 255 RNHACGMCRKRFTDKKALTQHEVIHSRER 283
+ H C C K F + +AL H+ H +ER
Sbjct: 58 KRHECQYCGKEFANSQALGGHQNAHKKER 86
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 79 YKCLECDMFFKSTRARKTHVARYHREGLQCDHCKKTFVNKSTLVTHLKLHDGPLPRDECP 138
++C C+ FKS +A H A + ++ + D + K + H ECP
Sbjct: 160 FECETCEKVFKSYQALGGHRASHKKKIAETDQLGSDELKKKKKKSTSSHH-------ECP 212
Query: 139 ICHKMVRSTQ-LKYHVQRHKS 158
IC K+ S Q L H + H S
Sbjct: 213 ICAKVFTSGQALGGHKRSHAS 233
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 13/86 (15%)
Query: 195 YPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKP 254
+ C C K + + +A+ H + +HK + E + K +KK
Sbjct: 160 FECETCEKVFKSYQALGGH-------RASHKKKIAETDQLGSDELKKK------KKKSTS 206
Query: 255 RNHACGMCRKRFTDKKALTQHEVIHS 280
+H C +C K FT +AL H+ H+
Sbjct: 207 SHHECPICAKVFTSGQALGGHKRSHA 232
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 107 QCDHCKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYECEE 166
+C+ C+K F + L H H + + + S +LK ++ S S +EC
Sbjct: 161 ECETCEKVFKSYQALGGHRASHKKKIAETD------QLGSDELKKKKKKSTS-SHHECPI 213
Query: 167 CNKVFSHLATYQAHLKYARAHAT 189
C KVF+ + QA + R+HA+
Sbjct: 214 CAKVFT---SGQALGGHKRSHAS 233
>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 2/20 (10%)
Query: 71 LSKTTIEG--YKCLECDMFF 88
L K +IEG Y CLECDM+F
Sbjct: 140 LCKESIEGPSYSCLECDMYF 159
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 255 RNHACGMCRKRFTDKKALTQHEVIHSRER 283
R + C C++ FT+ +AL H IH R+R
Sbjct: 33 RMYECTFCKRGFTNAQALGGHMNIHRRDR 61
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 92 RARKTHVARYHREGLQCDHCKKTFVNKSTLVTHLKLH 128
R + V+ R +C CK+ F N L H+ +H
Sbjct: 21 RTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIH 57
>At5g27880.1 68418.m03344 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 278
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 241 KHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRER 283
+ +M+ + K K + C C+K F+ +AL H+ H +ER
Sbjct: 66 REIMKFYPSKSNKI--YTCHFCKKGFSTSQALGGHQNAHKQER 106
>At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type domain, Prosite:PS00028
Length = 272
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 247 HGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPL 285
+G + + +C C++ F +AL H+ H RER L
Sbjct: 94 NGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTL 132
>At4g21050.1 68417.m03044 Dof-type zinc finger domain-containing
protein PBF protein, Triticum aestivum, EMBL:AJ012284
Length = 210
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 115 FVNKSTLVTHLKLHDGPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSH 173
F N+ V LK P P CP C +T+ ++ +S+ RY C+ C + ++H
Sbjct: 7 FANEDNQVNGLKR---PPPSRVCPRCDS--DNTKFCFYNNYSESQPRYFCKNCRRYWTH 60
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 125 LKLHDGPLPRD--ECPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
L L D +D ECPIC + T H+Q K + C C VF+ AHL+
Sbjct: 1705 LSLKDWAKGKDVKECPICKSTIEKTDGCNHLQCRCGK--HICWTCLDVFTQAEPCYAHLR 1762
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 29.9 bits (64), Expect = 2.4
Identities = 29/116 (25%), Positives = 42/116 (36%), Gaps = 24/116 (20%)
Query: 162 YECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCN-KGYPTKEAMQDHFNYQHLG 220
YEC+ CN+ FS H + T K P+ K ++E HF
Sbjct: 113 YECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFK----- 167
Query: 221 KTAHKCPVCEKPIASRA-NVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQH 275
V +AS+A N++ +V H C +C FT +AL H
Sbjct: 168 -------VSGSALASQASNIINKANKV----------HECSICGSEFTSGQALGGH 206
>At1g72270.1 68414.m08355 expressed protein
Length = 2777
Score = 29.9 bits (64), Expect = 2.4
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Query: 85 DMFFKST---RARKTHVARYHREGLQCDHCKKTFVNKSTLVTHLKLHDGPLPRDECP-IC 140
D F ST R+++ V R GL+ + + ++ S L T + PL DE +
Sbjct: 2267 DFFGSSTVNFRSQRLWVLRLVFVGLESEEDAQIYIRNSILETVMGFFSSPLADDETKGLI 2326
Query: 141 HKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLAT 176
++VR + + + RH ++ C+ FS L T
Sbjct: 2327 LQVVRKSVKLHKMARHLVENCGLLSWCSSFFSMLTT 2362
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 259 CGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKASLYTHKKRVHKVVPNKK 315
C C K F KAL H HS + D T + + KRV V P+ K
Sbjct: 95 CRECGKGFVSSKALCGHMACHSEREKIVMDSQSDTEASSSPIRRRSKRV-VVKPHHK 150
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 29.9 bits (64), Expect = 2.4
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 30/139 (21%)
Query: 160 SRYECEECNKVFSHLATYQAHL-----KYAR-------AHATEQVLKYPCPMCNKG---- 203
+++ C CNK F+ Q H+ +Y + ++ +L+ PC C +G
Sbjct: 99 TQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNN 158
Query: 204 --YPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACG- 260
+P + ++D Q K H KP R K V G+ + +N CG
Sbjct: 159 IDHPRSKPLKDFRTLQTHYKRKHGA----KPFRCRKKCEK-TFAVRGDWRTHEKN--CGK 211
Query: 261 ----MCRKRFTDKKALTQH 275
+C F K++L H
Sbjct: 212 LWFCVCGSDFKHKRSLKDH 230
Score = 29.1 bits (62), Expect = 4.2
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Query: 194 KYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEK 253
++ C +CNK + MQ H + H G K P + S +++++ E +
Sbjct: 100 QFSCSVCNKTFNRFNNMQMHM-WGH-GSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKN 157
Query: 254 PRNHACGMCRKRFTDKKALTQHEVIHSRERPLTC-DICQQTFKQKASLYTHKKRVHKV 310
+H K D + L H +P C C++TF + TH+K K+
Sbjct: 158 NIDHPRS---KPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCGKL 212
>At5g37890.1 68418.m04565 seven in absentia (SINA) protein, putative
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 286
Score = 29.5 bits (63), Expect = 3.2
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 11/117 (9%)
Query: 197 CPMCNKGY--PTKEAMQDHFNYQHL-GKTAHKCPVCEKPIA-SRANVVKHVMRVHGEKKE 252
CP+C + + P + H K +KCP C P+ +R ++ V+ E
Sbjct: 51 CPICYEAFTIPIFQCDNGHLACSSCCPKLNNKCPACTSPVGHNRCRAMESVL----ESIL 106
Query: 253 KPRNHACGMCRKRFTDKKALT-QHEVIHSRERPLTCDICQQTFKQKASLYTHKKRVH 308
P +A C+K + K LT + E + S D C T K LYTH + H
Sbjct: 107 IPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALD-CNYTSSYK-DLYTHYRITH 161
>At5g18260.1 68418.m02146 expressed protein
Length = 320
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 259 CGMCRKRFTDKKALTQHEVIHSRERPLT 286
CG+C+K + K + ++++ SR+ P T
Sbjct: 192 CGICKKLLSQKSPWSSYKILRSRDMPAT 219
>At4g39140.4 68417.m05544 expressed protein
Length = 429
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 247 HGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRE 282
HG + K + H CG C + ++K + ++ + E
Sbjct: 248 HGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNE 283
>At4g39140.3 68417.m05543 expressed protein
Length = 429
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 247 HGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRE 282
HG + K + H CG C + ++K + ++ + E
Sbjct: 248 HGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNE 283
>At4g39140.2 68417.m05542 expressed protein
Length = 429
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 247 HGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRE 282
HG + K + H CG C + ++K + ++ + E
Sbjct: 248 HGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNE 283
>At4g39140.1 68417.m05541 expressed protein
Length = 429
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 247 HGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRE 282
HG + K + H CG C + ++K + ++ + E
Sbjct: 248 HGNRMSKHQQHTCGACSRPLSEKSLWSSQKIFMTNE 283
>At5g37910.1 68418.m04567 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 276
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
Query: 221 KTAHKCPVCEKPIA-SRANVVKHVMRVHGEKKEKP-RNHACGMCRKRFTDKKALTQHEVI 278
K ++KCP C P+ SR+ ++ V+ E P N G + F K++ + E I
Sbjct: 65 KLSNKCPACTLPVGHSRSRAMESVL----ESILIPCPNVRFGCTKSFFYGKESAHEKECI 120
Query: 279 HSRERPLTCDICQQTFKQKASLYTHKKRVH 308
S + +C T K LY H K H
Sbjct: 121 FS-QCSCPSSVCDYTGSYK-DLYAHYKLTH 148
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 107 QCDHCKKTFVNKSTLVTHLKL--HDGPLPRDECPICHKMVRSTQ-LKYHVQRHKSKSRYE 163
+C C + F LV H+K+ H G P C +C K RS + L+ H+ K
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEPT--CGVCKKHCRSFESLREHLIGPLPK---- 69
Query: 164 CEECNKVFS 172
+EC +FS
Sbjct: 70 -QECKNIFS 77
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 224 HKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQH 275
+KC C + ++V+H M++ +P CG+C+K ++L +H
Sbjct: 15 NKCAACYRQFNKLEHLVEH-MKISYHSGHEP---TCGVCKKHCRSFESLREH 62
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 227 PVCEKPIAS-RANVVK--HVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRER 283
P C+ I RA +K ++ H ++K R AC C K F K HE + +
Sbjct: 307 PGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHE--KNCGK 364
Query: 284 PLTCDICQQTFKQKASLYTHKK 305
C C FK K SL H K
Sbjct: 365 LWYCS-CGSDFKHKRSLKDHVK 385
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 199 MCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHA 258
+C+ + + D+F QH EK +R + + R GE++ K R+H
Sbjct: 288 ICDDPAYARSIVDDYFA-QHRESEKELFAEAEKERKAREDEEARIAREEGERRRKERDHR 346
Query: 259 CGMCRKRF 266
G R+R+
Sbjct: 347 YGDRRRRY 354
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 199 MCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHA 258
+C+ + + D+F QH EK +R + + R GE++ K R+H
Sbjct: 342 ICDDPAYARSIVDDYFA-QHRESEKELFAEAEKERKAREDEEARIAREEGERRRKERDHR 400
Query: 259 CGMCRKRF 266
G R+R+
Sbjct: 401 YGDRRRRY 408
>At5g54360.1 68418.m06769 zinc finger (C2H2 type) family
protein-related contains Prosite:PS00028: Zinc finger,
C2H2 type, domain.
Length = 270
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 251 KEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPL 285
K+ +H C C++ F AL H H +ER L
Sbjct: 75 KDNKISHTCRFCKRNFKSCFALGGHMKCHKKEREL 109
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Query: 221 KTAHKCPVCEKPIASR----ANVVKHVMRVHGEKKEKP------RNHACGMCRKRFTDKK 270
K ++KC VC K +S + H G + +K ++H C +C K F +
Sbjct: 72 KPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQ 131
Query: 271 ALTQHEVIH 279
AL H+ H
Sbjct: 132 ALGGHKRCH 140
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 252 EKPRNHACGMCRKRFTDKKALTQHEVIH 279
EKP ++ CG+C K F+ +AL H+ H
Sbjct: 71 EKP-SYKCGVCYKTFSSYQALGGHKASH 97
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 258 ACGMCRKRFTDKKALTQHEVIHSRERPL 285
+C C++ F +AL H+ H RER L
Sbjct: 62 SCNYCQRTFYSSQALGGHQNAHKRERTL 89
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 219 LGKTAHKCPVCEKPIASRANVVKHVMRVHGEK 250
L K H C +C K AN+ H MR HG++
Sbjct: 212 LAKYTHYCQICGKGFKRDANLRMH-MRAHGDE 242
>At4g14780.1 68417.m02273 protein kinase, putative similar to
protein kinase ATMRK1 [Arabidopsis thaliana]
gi|2351097|dbj|BAA22079
Length = 364
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 115 FVNKSTLVTHLKLHD----GPLPRDECPICHKMVRSTQLKYHVQRHKSK 159
FV S T+L + G LP+ C + + + LK H+ RHKSK
Sbjct: 128 FVGASMGTTNLNIRSADSKGSLPQQACCVVVEYLPGGTLKQHLIRHKSK 176
>At4g12240.1 68417.m01941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 364
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 263 RKRFTDKKALT--QHEVIHSRERPLTCDICQQTFKQKASLYTHKKRVHKVVPNKKVVEFI 320
R++ D+K L +++ + P C +C + F L H K++H+ N+K + I
Sbjct: 93 REQRKDRKLLNKLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHE-TENQKRMRQI 151
Query: 321 EAT 323
E++
Sbjct: 152 ESS 154
>At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ;
contains Pfam profile: PF00096 Zinc finger, C2H2 type
Length = 172
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 255 RNHACGMCRKRFTDKKALTQHEVIHSRER 283
R++ C C + F++ +AL H IH R+R
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDR 61
>At2g28710.1 68415.m03490 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 156
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 233 IASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPL 285
I + AN + + + H + K R AC C K F +AL H H R L
Sbjct: 11 INNMANCLILLSKAH-QNDTKSRVFACKTCNKEFPSFQALGGHRASHRRSAAL 62
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 7/91 (7%)
Query: 195 YPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRAN------VVKHVMRVHG 248
Y C +C K + + +A+ H H T + +++ ++ V+ +
Sbjct: 97 YKCTVCGKSFSSYQALGGH-KTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGN 155
Query: 249 EKKEKPRNHACGMCRKRFTDKKALTQHEVIH 279
+ + H C +C K F +AL H+ H
Sbjct: 156 GVSQSGKIHTCSICFKSFASGQALGGHKRCH 186
>At5g53860.1 68418.m06697 expressed protein
Length = 402
Score = 28.3 bits (60), Expect = 7.4
Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 75 TIEGYKCLECDMFFKSTRARKTHVARYH-REGLQ--CDHCKKTFVNKSTLVTHLKL---H 128
T G++ L C M K T + + Y+ R G + D V + HL H
Sbjct: 101 TCNGWQALRCTMC-KGTGSVHYQIKDYNLRSGEKPTADCVADAIVENRAELVHLPSSFNH 159
Query: 129 DGPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYE 163
PLP +CP C + K + K YE
Sbjct: 160 SAPLPSKDCPTCDGTIMEPPWKAYNVLKKMDYPYE 194
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 79 YKCLECDMFFKSTRARKTHVARYHREGLQCDHCKKTFVNKSTLVTHLKLH---DGPLPRD 135
YKC CD F S +A H A + + ++ S+ +T + G +
Sbjct: 89 YKCSVCDKAFSSYQALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSH 148
Query: 136 ECPICHKMVRSTQ 148
C ICHK + Q
Sbjct: 149 VCSICHKSFATGQ 161
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 28.3 bits (60), Expect = 7.4
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 15/99 (15%)
Query: 219 LGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEK-PRN----HACGMCRKRFTDKKALT 273
+G T CPVC K N+ H M HG + K P + GM R
Sbjct: 212 IGPTQFSCPVCFKTFNRYNNMQMH-MWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGC 270
Query: 274 QHEVIHSRERPLTCDICQQTFKQKASLYTHKKRVHKVVP 312
++ + H R +PL K +L TH KR H + P
Sbjct: 271 RNNIDHPRAKPL---------KDFRTLQTHYKRKHGIKP 300
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 89 KSTRARKTHVARYHREGLQCDHCKKTFVNKSTLVTHL 125
KSTR KT +CD C + F +++ L HL
Sbjct: 583 KSTRGMKTKGTTKKNSSNECDRCGEEFESRTKLHKHL 619
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 28.3 bits (60), Expect = 7.4
Identities = 35/148 (23%), Positives = 52/148 (35%), Gaps = 18/148 (12%)
Query: 160 SRYECEECNKVFSHLATYQAHL--KYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFNYQ 217
+ + C C K F+ Q H+ ++ + LK P G P ++ N
Sbjct: 143 THFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRN-- 200
Query: 218 HLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEV 277
H+ KP+ + H R HG K +C +C K K HE
Sbjct: 201 HIDHPR------SKPLKDFRTLQTHYKRKHGHKP-----FSCRLCGKLLAVKGDWRTHE- 248
Query: 278 IHSRERPLTCDICQQTFKQKASLYTHKK 305
+ + C +C FK K SL H K
Sbjct: 249 -KNCGKRWVC-VCGSDFKHKRSLKDHVK 274
>At5g61190.1 68418.m07676 zinc finger protein-related contains Pfam
profile PF04396: Protein of unknown function DUF537,
weak hit to PF00096: Zinc finger C2H2 type
Length = 977
Score = 27.9 bits (59), Expect = 9.7
Identities = 56/259 (21%), Positives = 94/259 (36%), Gaps = 32/259 (12%)
Query: 76 IEGYKCLECDMFFKSTRARKTHV-ARYHREGLQCDHCKKTFVNKSTLVTHLKLHDGPL-P 133
+E C C + F + K H + HR L+ K +K+ LV GP P
Sbjct: 294 VEPLLCKVCQISFTNNDTYKNHTYGKKHRNNLELQSGK----SKNILV-------GPAEP 342
Query: 134 RDECPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK-------YARA 186
E H M + ++ R ++ + + C CN V + +HL+ +++
Sbjct: 343 SKEVLEKHNMNKKVMIE---SRAQANAEFVCLMCNVVCQSQIVFNSHLRGKKHANMLSQS 399
Query: 187 HAT-EQVLKYPCPMCNKGYPTKEAMQD---HFNYQHLGKTAHKCP---VCEKPIASRANV 239
AT +Q L + KG KE + Q + P V K + + +
Sbjct: 400 EATLDQALIVSTKLQEKGVGEKEQPSETVAELQLQSQKAQEKQVPMVLVDSKKLPEKGDE 459
Query: 240 VKHVMRVHGEKKEKPRNHACGMCR-KRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKA 298
VK + + + C MC + D K L Q + +E+P + Q Q A
Sbjct: 460 VKGQPKEMTALRNASAKYICRMCNDQALIDSKKL-QEKGFGEKEQPRETIVEPQLQSQNA 518
Query: 299 SLYTHKKRVHKVVPNKKVV 317
+ H V+ N+ V
Sbjct: 519 QENSKCFEKHVVMVNQSEV 537
>At4g39280.1 68417.m05563 phenylalanyl-tRNA synthetase, putative /
phenylalanine--tRNA ligase, putative similar to
SP|Q9Y285 Phenylalanyl-tRNA synthetase alpha chain (EC
6.1.1.20) (Phenylalanine- -tRNA ligase alpha chain)
(PheRS) {Homo sapiens}; contains Pfam profile PF01409:
tRNA synthetases class II core domain (F)
Length = 485
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 80 KCLECDMFFKSTRARKTHVARYHR-EGLQCD 109
K D F++ +TH+A +H+ EGL CD
Sbjct: 337 KYFSIDRVFRNEAVDRTHLAEFHQIEGLICD 367
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 178 QAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDH 213
Q+ L + + E + Y C +C KGY + +A + H
Sbjct: 51 QSALAQEKNKSNEAPMLYTCAICAKGYRSSKAHEQH 86
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 178 QAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDH 213
Q+ L + + E + Y C +C KGY + +A + H
Sbjct: 51 QSALAQEKNKSNEAPMLYTCAICAKGYRSSKAHEQH 86
>At3g45555.1 68416.m04920 zinc finger (C3HC4-type RING finger)
family protein low similarity to UbcM4-interacting
protein 4 [Mus musculus] GI:13991706; contains Pfam
profiles PF00097: Zinc finger C3HC4 type (RING finger),
PF01485: IBR (In Between Ring fingers) domain
Length = 213
Score = 27.9 bits (59), Expect = 9.7
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 71 LSKTTIE-GY-KCLECDMFFKSTRARKTHVARYHREGLQCDHCKKTFVNKSTLVTHLKLH 128
LSK+T+E G+ +C +C F V+ + L CD+CKK N ++ LK+
Sbjct: 118 LSKSTLEDGFVRCFQCGERF----CINCKVS--WQSNLSCDNCKKLGNNPTSDDKMLKVL 171
Query: 129 DGPLPRDECPICHKMVRSTQLKYHV 153
+C C M++ ++ HV
Sbjct: 172 ANEKKWRQCEKCQHMIKLSEGCIHV 196
>At2g26050.1 68415.m03128 hypothetical protein
Length = 221
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 228 VCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTC 287
+C+ + +N K R +K+ P+ C +CR ++ +T +P +C
Sbjct: 44 MCDTSVR-HSNCFKQFRRKTIKKRLYPKTLHCPLCRGEVSETTKVTSTARRFMNAKPRSC 102
Query: 288 DICQQTFKQKASLYT-HKKRVHK-VVPNK 314
+ F S T H K H+ +VP K
Sbjct: 103 SVEDCKFSGTFSQLTKHLKTEHRGIVPPK 131
>At1g77770.2 68414.m09056 expressed protein
Length = 264
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 137 CPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYP 196
CP+C + + L HK Y C ++ + L Y+ Y ++ + L
Sbjct: 31 CPVCLESPHNAVLLLCSSYHKGCRPYMCATSSRFANCLDQYRK--SYGNENSGQPELL-- 86
Query: 197 CPMCN---KGYPTKEAMQDHFN 215
CP+C KG+ + + HFN
Sbjct: 87 CPLCRGQVKGWTVVKDARMHFN 108
>At1g77770.1 68414.m09055 expressed protein
Length = 265
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 137 CPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYP 196
CP+C + + L HK Y C ++ + L Y+ Y ++ + L
Sbjct: 31 CPVCLESPHNAVLLLCSSYHKGCRPYMCATSSRFANCLDQYRK--SYGNENSGQPELL-- 86
Query: 197 CPMCN---KGYPTKEAMQDHFN 215
CP+C KG+ + + HFN
Sbjct: 87 CPLCRGQVKGWTVVKDARMHFN 108
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.134 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,369,053
Number of Sequences: 28952
Number of extensions: 290691
Number of successful extensions: 1690
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1324
Number of HSP's gapped (non-prelim): 389
length of query: 324
length of database: 12,070,560
effective HSP length: 81
effective length of query: 243
effective length of database: 9,725,448
effective search space: 2363283864
effective search space used: 2363283864
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 59 (27.9 bits)
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