Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001656-TA|BGIBMGA001656-PA|IPR007087|Zinc finger,
C2H2-type
(324 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 91 5e-20
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 33 0.008
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 32 0.019
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 29 0.13
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 27 0.71
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 24 5.0
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 24 5.0
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 90.6 bits (215), Expect = 5e-20
Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 14/239 (5%)
Query: 74 TTIEGYKCLECDMFFKSTRARKTHVARY---HREGLQCDHCKKTFVNKSTLVTHLKLHDG 130
T + ++C CD F ++ H+ RY H +C C V S L H++ H G
Sbjct: 178 TGTKPHRCKHCDNCFTTSGELIRHI-RYRHTHERPHKCTECDYASVELSKLKRHIRTHTG 236
Query: 131 PLPRDECPIC-HKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKYARAHAT 189
P +CP C + +L H++ H + Y C+ C F+ + +AH H
Sbjct: 237 EKPF-QCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAH---KMIHQV 292
Query: 190 EQVLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGE 249
+ C +C K ++ H H KC C+ R + H GE
Sbjct: 293 GNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAKTHEGE 352
Query: 250 KKEKPRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKASLYTHKKRVH 308
K + C C + L H ++H+ ++P CD C QTF+QK L H H
Sbjct: 353 KC-----YRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYH 406
Score = 88.6 bits (210), Expect = 2e-19
Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 14/223 (6%)
Query: 89 KSTRARKTHVARYHREGLQCDHCKKTFVNKSTLVTHLKLHDGPLPRDECPICHKMVRS-T 147
K T+ R + C++C T L HLK H P +C +C + ++
Sbjct: 110 KKTQTRGKRTQQSTGSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPH-KCVVCERGFKTLA 168
Query: 148 QLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTK 207
L+ HV H + C+ C+ F+ H++Y H + C C+
Sbjct: 169 SLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHER----PHKCTECDYASVEL 224
Query: 208 EAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFT 267
++ H H G+ +CP C + + +H MR+H EKP ++C +C RFT
Sbjct: 225 SKLKRHIR-THTGEKPFQCPHCTYASPDKFKLTRH-MRIH--TGEKP--YSCDVCFARFT 278
Query: 268 DKKALTQHEVIHS-RERPL-TCDICQQTFKQKASLYTHKKRVH 308
+L H++IH +P+ C +C T +K L H + +H
Sbjct: 279 QSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLH 321
Score = 78.2 bits (184), Expect = 3e-16
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 21/254 (8%)
Query: 68 RRLLSKTTIEGYKCLECDMF----FKSTRARKTHVARYHREGLQCDHCKKTFVNKSTLVT 123
R + + T + ++C C FK TR + H + CD C F ++L
Sbjct: 229 RHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIHTGE---KPYSCDVCFARFTQSNSLKA 285
Query: 124 HLKLHD-GPLPRDECPICHKMV-RSTQLKYHVQR-HKSKSRYECEECNKVFSHLATYQAH 180
H +H G P +C +C R T L+ HVQ H + +C+ C+ F +Y+ H
Sbjct: 286 HKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMH 345
Query: 181 LKYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVV 240
A+ H E+ Y C C + ++ H H + +KC C + + +
Sbjct: 346 ---AKTHEGEKC--YRCEYCPYASISMRHLESHL-LLHTDQKPYKCDQCAQTFRQKQLLK 399
Query: 241 KHVMRVHGEKKEKP----RNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDI-CQQTFK 295
+H+ H P + H C C++ F K L +H +H E ++ ++ + +
Sbjct: 400 RHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMHDPESTVSKEMEALREGR 459
Query: 296 QKASLYTHKKRVHK 309
QK T ++ ++K
Sbjct: 460 QKKVQITFEEEIYK 473
Score = 42.3 bits (95), Expect = 2e-05
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Query: 70 LLSKTTIEGYKCLECDMFFKSTRARKTHVARYHREGLQ----------CDHCKKTFVNKS 119
LL T + YKC +C F+ + K H+ YH C CK+ F +K
Sbjct: 374 LLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKG 433
Query: 120 TLVTHLKLHD--GPLPRDECPICHKMVRSTQLKYHVQRHKSKSRYECEE 166
L+ H+ +HD + ++ + + Q+ + + +K + YE EE
Sbjct: 434 NLIRHMAMHDPESTVSKEMEALREGRQKKVQITFEEEIYKGEEDYEGEE 482
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 33.5 bits (73), Expect = 0.008
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 195 YPCPMCNKGYPTKEAMQDHFNYQHLGKTAHKCPVCEKPIASRANVVKHVMRVHGEKKEKP 254
Y C C+K T H N +H+CPVC + R N+ H H E +++
Sbjct: 899 YSCVSCHK---TVSNRWHHANIHR--PQSHECPVCGQKFTRRDNMKAHCKVKHPELRDRF 953
Query: 255 RNHACGM 261
NH M
Sbjct: 954 YNHIVHM 960
Score = 29.9 bits (64), Expect = 0.10
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 137 CPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLK 182
C CHK V + +H H+ +S +EC C + F+ +AH K
Sbjct: 901 CVSCHKTVSNRW--HHANIHRPQS-HECPVCGQKFTRRDNMKAHCK 943
Score = 29.1 bits (62), Expect = 0.18
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 222 TAHKCPVCEKPIASRANVVKHVMRVHGEKKEKPRNHACGMCRKRFTDKKALTQH 275
T + C C K +++R H +H +P++H C +C ++FT + + H
Sbjct: 897 TLYSCVSCHKTVSNRW----HHANIH-----RPQSHECPVCGQKFTRRDNMKAH 941
Score = 27.1 bits (57), Expect = 0.71
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 254 PRNHACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKASLYTHKKRVH 308
P ++C C K +++ H IH R + C +C Q F ++ ++ H K H
Sbjct: 896 PTLYSCVSCHKTVSNR---WHHANIH-RPQSHECPVCGQKFTRRDNMKAHCKVKH 946
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 32.3 bits (70), Expect = 0.019
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Query: 189 TEQVLKYPCPMCNKGYPTKEAMQDHFNYQHLGKTAH---KCPVCEKPIASRANVVKHVMR 245
T + ++ C +C+ Y TK Q H H + KC +C K + R + H+
Sbjct: 343 TSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRA 402
Query: 246 VH 247
+H
Sbjct: 403 IH 404
Score = 29.5 bits (63), Expect = 0.13
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 259 CGMCRKRFTDKKALTQHEV-IH--SRER-PLTCDICQQTFKQKASLYTHKKRVH 308
C +C + K +HE +H S E + C IC + F Q+ H + +H
Sbjct: 351 CNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAIH 404
Score = 29.1 bits (62), Expect = 0.18
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 75 TIEG--YKCLECDMFFKSTRARKTHVARYHR-----EGLQCDHCKKTFVNKSTLVTHLK- 126
T EG ++C CDM +++ + H HR G++C C K F + H++
Sbjct: 343 TSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRA 402
Query: 127 LHDGP 131
+H P
Sbjct: 403 IHPKP 407
Score = 27.9 bits (59), Expect = 0.41
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 134 RDECPICHKMVRSTQLKYHVQRHK----SKSRY--ECEECNKVFSHLATYQAHLK 182
R +C +C R T+L+Y ++ S + +C C+K+FS YQ H++
Sbjct: 348 RFQCNLCDMSYR-TKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMR 401
Score = 25.4 bits (53), Expect = 2.2
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 278 IHSRERPLTCDICQQTFKQKASLYTHKKRVHKV 310
I S + C++C +++ K H+ VH++
Sbjct: 342 ITSEGQRFQCNLCDMSYRTKLQYQKHEYEVHRI 374
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 29.5 bits (63), Expect = 0.13
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 137 CPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKY 183
C +C K+V + YHV R+EC C ++ + H K+
Sbjct: 502 CKLCGKVVTHIRNHYHVH---FPGRFECPLCRATYTRSDNLRTHCKF 545
Score = 29.1 bits (62), Expect = 0.18
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 162 YECEECNKVFSHLATYQAHLKYARAHATEQVLKYPCPMCNKGYPTKEAMQDHFNYQH 218
+ C+ C KV +H+ + H+ + ++ CP+C Y + ++ H ++H
Sbjct: 500 HRCKLCGKVVTHIRNHY-HVHFPG--------RFECPLCRATYTRSDNLRTHCKFKH 547
Score = 28.7 bits (61), Expect = 0.23
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 257 HACGMCRKRFTDKKALTQHEVIHSRERPLTCDICQQTFKQKASLYTHKKRVH 308
H C +C K T + H +H R C +C+ T+ + +L TH K H
Sbjct: 500 HRCKLCGKVVTH---IRNHYHVHFPGR-FECPLCRATYTRSDNLRTHCKFKH 547
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 27.1 bits (57), Expect = 0.71
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 278 IHSRERPLTCDICQQTFKQKASLYTHKKRVHKVVPN 313
I +ER T + QQ + +A H + H+V+PN
Sbjct: 865 IRKQERQATIEQWQQQWDAEADTSRHTRWAHRVLPN 900
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 24.2 bits (50), Expect = 5.0
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 137 CPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKYARA 186
C C K V T +H H + R C C +S + T ++HL+ A
Sbjct: 529 CRSCGKEV--TNRWHHFHSH-TPQRSLCPYCPASYSRIDTLRSHLRIKHA 575
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 24.2 bits (50), Expect = 5.0
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 137 CPICHKMVRSTQLKYHVQRHKSKSRYECEECNKVFSHLATYQAHLKYARA 186
C C K V T +H H + R C C +S + T ++HL+ A
Sbjct: 505 CRSCGKEV--TNRWHHFHSH-TPQRSLCPYCPASYSRIDTLRSHLRIKHA 551
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.323 0.134 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,338
Number of Sequences: 2123
Number of extensions: 13446
Number of successful extensions: 81
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 23
Number of HSP's gapped (non-prelim): 29
length of query: 324
length of database: 516,269
effective HSP length: 64
effective length of query: 260
effective length of database: 380,397
effective search space: 98903220
effective search space used: 98903220
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 48 (23.4 bits)
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