Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001655-TA|BGIBMGA001655-PA|IPR001683|Phox-like
(272 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual 42 1e-04
SPBC887.06c |snx3|grd19|sorting nexin Snx3|Schizosaccharomyces p... 40 4e-04
SPCPJ732.01 |vps5||retromer complex subunit Vps5|Schizosaccharom... 40 5e-04
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 38 0.002
SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces... 36 0.006
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 34 0.019
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 34 0.025
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 28 1.2
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 28 1.2
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 28 1.2
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 27 2.9
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.9
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 3.8
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 26 5.0
SPBC2A9.11c ||SPBC2D10.01c|nuclear export factor|Schizosaccharom... 26 6.7
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 26 6.7
SPBC17D1.02 |||diphthamide biosynthesis protein |Schizosaccharom... 26 6.7
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 25 8.8
>SPCC594.06c |||SNARE Vam7 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 41.5 bits (93), Expect = 1e-04
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 99 KLQIPIVGYEVMEERARFTIYKLKVEDDKRDQSWLVFRRYTDFVRLYTRLKSEQPNIEL- 157
K++IP + +E +R+T+Y ++V + +VFRR+ +FV L +++ N L
Sbjct: 4 KIKIPETS-QSSDEYSRWTVYHIEVAFPNGGKH-VVFRRFNEFVALDAQIRPNDYNSRLC 61
Query: 158 PLPGKRWFRDNFEPTFLEERVR-GLQTFVNVILYKLP--NNPIVREFFCLDEPPQD 210
LP K W L E R LQ +V L + P P+V++F + + +D
Sbjct: 62 KLPSKSWVSSTVTNEKLRESRRLALQAYVQ-CLSETPWIKMPVVKKFLNIKDESED 116
>SPBC887.06c |snx3|grd19|sorting nexin Snx3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 39.9 bits (89), Expect = 4e-04
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 134 VFRRYTDFVRLYTRLKSEQPNIELP-LPGKRWFRDNFEPTFLEERVRGLQTFVNVI 188
V RRY++F + + L+ E + +P LPGK F F +EER +GL+ F+ ++
Sbjct: 63 VRRRYSEFEKFHDMLERESGRVSIPPLPGKI-FTQRFRDDVIEERRQGLENFLRLV 117
>SPCPJ732.01 |vps5||retromer complex subunit
Vps5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 39.5 bits (88), Expect = 5e-04
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 107 YEVMEERARFTIYKLKVEDDKRDQSWL----VFRRYTDFVRLYTRLKSEQPNIELPLPGK 162
+ V E T+Y + ++ +Q + V RRY DF LY L + P +P +
Sbjct: 210 HTVKEITKSHTVYSVSTRLEEHNQPSVSNVTVQRRYNDFAFLYQLLSNNHPGCIIPPIPE 269
Query: 163 RWFRDNFEPTFLEERVRGLQTFVNVILYKLPNNPIVREFFCLDEPPQDFSYQPEVQAVYG 222
+ F+ F+E+R L+ V+L K+ +P++R+ + + ++ P +
Sbjct: 270 KQVVGRFDDEFIEQRRAALE----VMLRKISAHPVLRDDYSFKLFLEAETFDPRMTHRTT 325
Query: 223 ALEDSITSLR 232
+E S + LR
Sbjct: 326 LIESSSSPLR 335
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 37.9 bits (84), Expect = 0.002
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 95 KKFDKLQIPIVGYEVMEERAR--FTIYKLKVEDDKRDQ---SWLVFRRYTDFVRLYTRLK 149
K F++ ++ I +++ +E F +Y +++E + W+V RRY +F L+ +LK
Sbjct: 694 KLFNRSRVSIDSFKISKEENTPDFAVYTIRIERLENGHVRSGWMVARRYREFAELHKQLK 753
Query: 150 SEQPNI-ELPLPGKRWFRDNFEPTFLEERVRGLQTFVNVILYKLP 193
P + L P K + LE R L+ ++ L+++P
Sbjct: 754 QTYPGVRSLKFPQKS-IITSLNKNVLEYRRGALEEYLQ-SLFRMP 796
>SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 35.9 bits (79), Expect = 0.006
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 108 EVMEERARFTIYKLKVEDDK---RDQSWLVFRRYTDFVRLYTRLKSEQPNIEL-PLPGK- 162
E + F Y+++ E D D+ + V RRY DF L+ L + + PLP K
Sbjct: 12 ETLRSGDTFVSYEIETESDLPVFEDKKFSVRRRYKDFEMLHNILSHDYNGYAIPPLPRKY 71
Query: 163 ---RWFRDNFEPTFLEERVRGLQTFVN 186
+ + P F+ R++ LQTF++
Sbjct: 72 TVSSFSGGSLSPIFIARRMQSLQTFLD 98
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 34.3 bits (75), Expect = 0.019
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 132 WLVFRRYTDFVRLYTRLKSEQPNIELPLPGKRWFRDNFEPTFLEERVRGLQTFVNVILY- 190
W+V+RRY F LY LK + +P +R N F E GL F+ +L+
Sbjct: 347 WVVYRRYRGFKTLYYLLKKQSARNGRAVPSFPVWRGNTYEKFRE----GLYFFIEALLHD 402
Query: 191 -KLPNNPIVREFF 202
N VR+FF
Sbjct: 403 SHFATNVDVRKFF 415
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 33.9 bits (74), Expect = 0.025
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 134 VFRRYTDFVRLYTRLKSEQPNIELPL-PGKRWFRDNF-EPTFLEERVRGLQTFVNVILYK 191
V RRY+DF L++ L + P +PL P K++ F F GL FVN + +
Sbjct: 317 VLRRYSDFFWLHSYLMKKYPFRRVPLIPLKKFHSKCFNSKQFFRTPPPGLSDFVNDLSHH 376
Query: 192 --LPNNPIVREFF 202
N+ +VR FF
Sbjct: 377 PIFSNDEVVRVFF 389
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 9 LQSRDAMNNDVSSASSEDNTTFGKIRRYYKNRRDSTSDSEMP 50
+++ D +ND SSASSE + G R RR + S+ P
Sbjct: 513 IENADGADNDDSSASSESFASAGAHSRSVFPRRSNVSEESHP 554
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 28.3 bits (60), Expect = 1.2
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 123 VEDDKRDQSWLVFRRYTDFVRLYTRLKSEQP-NIELPLPGKRWF--------RDNFEPTF 173
VE + Q V+RRY+DF L ++ + P I P+PGK+ + + F
Sbjct: 41 VEYEIVHQKRSVWRRYSDFESLVKLMRRQYPAAIVPPIPGKQSLLSYAKHPRKAKSDAEF 100
Query: 174 LEERVRGLQTFVNVILYK--LPNNPIVREF 201
L R R L+ F+ L + +NPI +F
Sbjct: 101 LNFRSRMLELFLRQCLLHPCIRSNPIFDKF 130
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 12 RDAMNNDVSSASSEDNTTFGKIRRYYKNRRDSTSDSEMPVRPQ 54
R A+ ND S +S N+++ I+ KN +D +E P RP+
Sbjct: 21 RSALLND-SLSSLNGNSSYDSIKDSSKNNKDVAEVNEYPRRPE 62
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1428
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 141 FVRLYTRLKSEQPNIELPLPGKRWFRDNFEPTFLEERVRGLQTFVNVILYKLPNNPIVRE 200
F + T +E+ +P + D PTF + LQ ++V+ Y+ NP
Sbjct: 56 FADISTATAAEKLQFTVPRRARFEINDPRNPTF---SMMALQDIISVLEYRRNKNPTSTA 112
Query: 201 FFCLDE 206
C+D+
Sbjct: 113 HICIDK 118
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 118 IYKLKVEDDKRDQSWLVFRRYTDFVRLYTRLKSEQPNIELP-LPGK 162
+Y+ ++ + ++ + R+Y+DF + L PN +P LP K
Sbjct: 190 VYEYLIKVSYEENTFFIARKYSDFSHFHHLLLKSYPNAYVPRLPPK 235
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 26.6 bits (56), Expect = 3.8
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 130 QSWLVFRRYTDFVRLYTRLKSE 151
+ WL FRRY DF L TR+ SE
Sbjct: 196 RQWL-FRRYGDFAVLNTRVPSE 216
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 26.2 bits (55), Expect = 5.0
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 2 DIVQNINL-QSRDAMNNDVSSASSEDNTTFGKIRRYYKNRRDSTSDSEMPVRPQ 54
DI++ +L ++RD N+D++ +S+ED + + TS +E+P P+
Sbjct: 384 DILKTSSLPEARDESNSDLTPSSTEDEEDVVSDQLAILYDKVKTSGAELPSAPK 437
>SPBC2A9.11c ||SPBC2D10.01c|nuclear export
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/46 (23%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 221 YGALEDSITSLRMQLKQKDATIMHLQKRLALLEGTIGQCGNCSTKI 266
+ +L +T R+Q + + + R+AL +G +G+ C T++
Sbjct: 185 FKSLRQDLTVQRIQ-NEFSVLVYEIHARIALEKGDVGEYNQCQTQL 229
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 33 IRRYYKNRRDSTSDSEMPVRPQRMHKSMHNLHE--NQRND 70
+RR + RDS S +E V+ M M +H+ +++ND
Sbjct: 111 LRRIFDKIRDSPSTTEYEVKVSYMEIYMEKIHDLLSEKND 150
>SPBC17D1.02 |||diphthamide biosynthesis protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 503
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Query: 6 NINLQSRDAMNNDVSSASSE 25
++ L++ DA NND SSAS E
Sbjct: 418 DVTLETADAKNNDSSSASIE 437
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 25.4 bits (53), Expect = 8.8
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 228 ITSLRMQLKQKDATIMHLQKRLALLEGTI 256
I +L+ LK+KDA +++LQ ++ E +
Sbjct: 167 IANLKKALKEKDAEVLNLQSHVSSKESEL 195
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,231,179
Number of Sequences: 5004
Number of extensions: 51781
Number of successful extensions: 160
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 150
Number of HSP's gapped (non-prelim): 19
length of query: 272
length of database: 2,362,478
effective HSP length: 72
effective length of query: 200
effective length of database: 2,002,190
effective search space: 400438000
effective search space used: 400438000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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