Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001655-TA|BGIBMGA001655-PA|IPR001683|Phox-like
(272 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g15900.1 68415.m01822 phox (PX) domain-containing protein wea... 53 2e-07
At1g15240.1 68414.m01824 phox (PX) domain-containing protein wea... 45 6e-05
At5g06140.1 68418.m00683 phox (PX) domain-containing protein sim... 39 0.004
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 37 0.017
At5g21326.1 68418.m02534 protein kinase family protein / NAF dom... 32 0.47
At3g48195.1 68416.m05258 phox (PX) domain-containing protein con... 31 0.63
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 30 1.4
At2g25350.1 68415.m03032 phox (PX) domain-containing protein wea... 30 1.9
At4g32160.1 68417.m04574 phox (PX) domain-containing protein con... 29 3.3
At4g01120.1 68417.m00150 G-box binding factor 2 (GBF2) identical... 29 4.4
At1g30000.1 68414.m03669 glycoside hydrolase family 47 protein s... 28 5.8
At1g29230.1 68414.m03575 CBL-interacting protein kinase 18 (CIPK... 28 5.8
At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zi... 28 7.7
At1g14970.1 68414.m01788 expressed protein contains Pfam PF03138... 28 7.7
>At2g15900.1 68415.m01822 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 1009
Score = 52.8 bits (121), Expect = 2e-07
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 99 KLQIPIVG-YEVMEERARFTIYKLKVEDDKRDQSWLVFRRYTDFVRLYTRLKSEQPNIEL 157
KL+ ++G Y + F +Y + V D + +++W V RRY++F RL+ +LK E PN L
Sbjct: 527 KLKCRVLGAYFEKQGSKSFAVYSIAVTDVE-NKTWFVKRRYSNFERLHRQLK-EIPNYNL 584
Query: 158 PLPGKRWFRDNFEPTFLEERVRGLQTFVNVIL 189
LP KR F + E F+ R L ++ +L
Sbjct: 585 QLPPKRIFSSSTEDAFVHRRCIQLDKYLQDLL 616
>At1g15240.1 68414.m01824 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 706
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 94 IKKFDKLQIPIVGYEVMEERAR-FTIYKLKVEDDKRDQSWLVFRRYTDFVRLYTRLKSEQ 152
+ F KL+ ++G +++ ++ F +Y + V D+ + SW + RR+ F L+ RLK
Sbjct: 607 VDSFAKLRCEVLGANIVKGSSKMFAVYSVAVTDES-NHSWSIKRRFRHFEELHRRLK-VF 664
Query: 153 PNIELPLPGKRWFRDNFEPTFLEERVRGLQTFVNV 187
P +L LP K + + ++ER L ++ V
Sbjct: 665 PEYKLHLPPKHFLSTGVDIPVIQERCVLLDEYIKV 699
>At5g06140.1 68418.m00683 phox (PX) domain-containing protein
similar to SP|O60749 Sorting nexin 2 {Homo sapiens};
contains Pfam profile PF00787: PX domain
Length = 402
Score = 38.7 bits (86), Expect = 0.004
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 133 LVFRRYTDFVRLYTRLKSEQPNIEL-PLPGKRWF-RDNFEPTFLEERVRGLQTFVNVILY 190
+V RRY+DFV L RL + I + PLP K + F F+E R L FVN I
Sbjct: 63 IVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRAALDIFVNRIAL 122
Query: 191 --KLPNNPIVREFFCLDEPPQDFSYQPEVQAVYGALEDSITSLR-MQLKQKDATI 242
+L + +R F DE D ++ + +++ D + R +Q K DA +
Sbjct: 123 HPELQQSEDLRTFLQADEETMD-RFRFQETSIFKKPADLMQMFRDVQSKVSDAVL 176
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 133 LVFRRYTDFVRLYTRLKSEQPNIELP-LPGKRWFRDNFEPTFLEERVRGLQTFVNVIL 189
LV RR+ DF+ LY+ +K E LP P K+ R T LEER L+ ++N +L
Sbjct: 146 LVLRRFNDFLELYSSIKKEFVKKSLPQAPPKKILRMR-NQTLLEERRCSLEDWMNRLL 202
>At5g21326.1 68418.m02534 protein kinase family protein / NAF
domain-containing protein contains Pfam profiles:
PF00069 protein kinase domain, PF03822 NAF domain
Length = 439
Score = 31.9 bits (69), Expect = 0.47
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 100 LQIPIVGYEVMEERARFTIYKLKVEDDKRDQSWLVFRRYTDFVRLYTRLKSEQPNIELPL 159
L + + GY E+ T+YK + + WL L R+ P + +
Sbjct: 204 LFVLLAGYLPFEDSNLMTLYKKIIAGEYHCPPWLS----PGAKNLIVRILDPNPMTRITI 259
Query: 160 P---GKRWFRDNFEPTFLEER 177
P G WF+ N++P EE+
Sbjct: 260 PEVLGDAWFKKNYKPAVFEEK 280
>At3g48195.1 68416.m05258 phox (PX) domain-containing protein
contains Pfam profile PF00787: PX domain
Length = 938
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 116 FTIYKLKVEDDKRDQSWLVFRRYTDFVRLYTRLKS 150
+T+Y ++V K W + RRY DF LY RL S
Sbjct: 500 YTVYVIRVWSGK--DKWEIERRYRDFYSLYRRLTS 532
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 225 EDSITSLRMQLKQKDATIMHLQKRLALLEGTIGQCGNCST 264
E + L+ QL K TI+ LQ++L + E I + +C+T
Sbjct: 1204 ETDVLLLKSQLCTKTETILRLQEKLKMAERLIYEASDCAT 1243
>At2g25350.1 68415.m03032 phox (PX) domain-containing protein weak
similarity to SP|Q9UTK5 Abnormal long morphology protein
1 (Sp8) {Schizosaccharomyces pombe}; contains Pfam
profile PF00787: PX domain
Length = 643
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 134 VFRRYTDFVRLYTRLKSEQPNIELPLPGKRWFRDNFEPTFLEERVRGLQTFVNVIL--YK 191
+ RR+ DFV+L LK P P + F LEER L+ ++ +L +
Sbjct: 87 ILRRFNDFVKLLADLKRAFPRKSFPSAPPKGFLRVKSRDMLEERRCSLEDWMTKLLSDIE 146
Query: 192 LPNNPIVREFFCLD 205
L + +V F L+
Sbjct: 147 LARSVVVASFLELE 160
>At4g32160.1 68417.m04574 phox (PX) domain-containing protein
contains Pfam profile PF00787: PX domain
Length = 723
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 134 VFRRYTDFVRLYTRLKSEQPNIELPLPGKRWFRDNFEPTFLEERVRGLQTFVNVIL--YK 191
V RR+ DF++L T LK P P + LEER L+ ++ +L +
Sbjct: 88 VLRRFNDFLKLLTDLKRTFPRKGFPSAPPKGLLRMKSRAVLEERRCSLEEWITKLLSDIE 147
Query: 192 LPNNPIVREFFCLD 205
L + +V F L+
Sbjct: 148 LARSVVVASFLELE 161
>At4g01120.1 68417.m00150 G-box binding factor 2 (GBF2) identical to
G-box binding factor 2 (GBF2) SP:P42775 from
[Arabidopsis thaliana];contains Pfam profile: PF00170
bZIP transcription factor
Length = 360
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 10 QSRDAMNNDVSSASSEDNTTFGKIRRYYKNRRDSTSDSEMPVRPQRMHKSMHNLHENQRN 69
+S + ND SS S+ NTT G+ R + ++ S S E P S+ EN++
Sbjct: 162 RSSQSSENDGSSNGSDGNTTGGEQSRRKRRQQRSPSTGERP----SSQNSLPLRGENEKP 217
Query: 70 DYT 72
D T
Sbjct: 218 DVT 220
>At1g30000.1 68414.m03669 glycoside hydrolase family 47 protein
similar to GI:5579331 from [Homo sapiens]; contains Pfam
profile PF01532: Glycosyl hydrolase family 47
Length = 624
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 116 FTIYKLKVEDDKRDQSWLVFRRYTDFVRLYTRLKSEQPNIELPLPGKRWFRDNFEPTFLE 175
F +Y++ + RDQ W +F + + ++ + + ++ +P R RD E FL
Sbjct: 532 FVLYRITKDTKYRDQGWQIFEAFEKYTKVKSGGYTSLDDV-TEVPPHR--RDKMETFFLG 588
Query: 176 ERVRGL 181
E ++ L
Sbjct: 589 ETLKYL 594
>At1g29230.1 68414.m03575 CBL-interacting protein kinase 18 (CIPK18)
identical to CBL-interacting protein kinase 18
[Arabidopsis thaliana] gi|14334388|gb|AAK59695
Length = 520
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 139 TDFVRLYTRLKSEQPNIELPLP---GKRWFRDNFE 170
+D VRL TRL P+ + +P RWF+ F+
Sbjct: 299 SDLVRLLTRLLDTNPDTRITIPEIMKNRWFKKGFK 333
>At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 190 YKLPNNPIVREFFCLDEPPQDFSYQPEVQAVYGALEDSITSLRMQLKQKDATIMHLQKRL 249
YK+ N +R FC + QD+ Y+ G + S T +Q A M L+ L
Sbjct: 31 YKVKVNGQLRCPFCAGKKKQDYKYKELYAHATGVSKGSATRSALQKANHLALAMFLENEL 90
Query: 250 A 250
A
Sbjct: 91 A 91
>At1g14970.1 68414.m01788 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as
'auxin-independent growth promoter -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 562
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 164 WFRDNFEPTFLEERVRGLQTFVNVILYKLPNNPIVREFFCL 204
++RD+ P LEE+V + F N + + P V+ F CL
Sbjct: 256 YYRDSVLPKLLEEKVIRISPFANRLSFDAPR--AVQRFRCL 294
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,119,919
Number of Sequences: 28952
Number of extensions: 247385
Number of successful extensions: 591
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 584
Number of HSP's gapped (non-prelim): 14
length of query: 272
length of database: 12,070,560
effective HSP length: 80
effective length of query: 192
effective length of database: 9,754,400
effective search space: 1872844800
effective search space used: 1872844800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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