GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001654-TA|BGIBMGA001654-PA|IPR007087|Zinc finger,
C2H2-type
         (261 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.    34   0.57 
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot...    31   4.0  
AL365181-9|CAI13053.1|  370|Homo sapiens G patch domain containi...    30   7.1  
AL365181-8|CAI13052.1|  234|Homo sapiens G patch domain containi...    30   7.1  

>AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.
          Length = 788

 Score = 33.9 bits (74), Expect = 0.57
 Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 1/164 (0%)

Query: 49  SDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQASCXXXXXXXXXXXXXXXXXX 108
           SD  N SD  DS++ S+G+D  + +++  S+S+D+     S                   
Sbjct: 371 SDSCNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSS 430

Query: 109 AQXXXXXXXXXXXXXXXXXPHHIDTDGSSDEAPLSRIVE-TDMSIKANQVDSPHNVMGVP 167
                                  D+  SSD +  S   + ++ S  +N  DS  +     
Sbjct: 431 DSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSN 490

Query: 168 NIVIVASLKPKLYTPEKKHNKRETTDNAQCTDSKTSTIDTKAED 211
           +     S      +     N  +++D++  +DS  S+  + + D
Sbjct: 491 SSDSSNSSDSSNSSDSSDSNSSDSSDSSXSSDSSDSSDSSDSSD 534



 Score = 32.3 bits (70), Expect = 1.8
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 3/165 (1%)

Query: 48  QSDLSNYSDQIDSNELSNGTDLF-ACDKTSISSSTDAERPQASCXXXXXXXXXXXXXXXX 106
           +SD SN SD  DS++ SN +D   + D    S+S+D+     S                 
Sbjct: 396 RSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDS 455

Query: 107 XXAQXXXXXXXXXXXXXXXXXPHHIDTDGSSDEAPLSRIVETDMSIKANQVDSPHNVMGV 166
             +                   +  D+  SSD +  S    ++ S  +N  DS  +    
Sbjct: 456 SNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSD--SSNSSDSSNSSDSSDSNSSD 513

Query: 167 PNIVIVASLKPKLYTPEKKHNKRETTDNAQCTDSKTSTIDTKAED 211
            +    +S            +  +++D++  +DS  S+  + + D
Sbjct: 514 SSDSSXSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSD 558



 Score = 30.3 bits (65), Expect = 7.1
 Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 4/172 (2%)

Query: 49  SDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQASCXXXXXXXXXXXXXXXXXX 108
           SD SN SD  DS++ S+     + D ++ S S+D+     S                   
Sbjct: 339 SDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSCNSSDSSDSSDSSDGSDSDSSNRSD 398

Query: 109 AQXXXXXXXXXXXXXXXXXPHHIDTD---GSSDEAPLSRIVETDMSIKANQVDSPHNVMG 165
           +                      D++    SSD +  S   ++D S  +N  DS  +   
Sbjct: 399 SSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNS 458

Query: 166 VPNIVIV-ASLKPKLYTPEKKHNKRETTDNAQCTDSKTSTIDTKAEDHREVN 216
             +     +S            +  +++D++  +DS  S+  + + D  + N
Sbjct: 459 SDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSN 510


>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
           precursor protein.
          Length = 1253

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 49  SDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQAS 89
           SD S+ SD  DSNE SN +D      +S S S+D+     S
Sbjct: 877 SDSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDS 917



 Score = 30.3 bits (65), Expect = 7.1
 Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 4/115 (3%)

Query: 48  QSDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQASCXXXXXXXXXXXXXXXXX 107
           +SD SN SD  DS++ SN +D  + D +  S S ++     S                  
Sbjct: 858 RSDSSNSSDSSDSSDSSNSSD--SSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSS 915

Query: 108 XAQXXXXXXXXXXXXXXXXXPHHIDTDGSSDEAPLSRIVETDMSIKANQVDSPHN 162
            +                   +  D+  SSD +  S    ++ S  +N  DS ++
Sbjct: 916 DSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSD--SSNSSDSSNSGDSSNS 968



 Score = 29.9 bits (64), Expect = 9.3
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 3/165 (1%)

Query: 47  AQSDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQASCXXXXXXXXXXXXXXXX 106
           + SD SN SD  DS++ SN ++      +S S S+D+    ++                 
Sbjct: 685 SSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSS-DSSNSNSSDSDSSNSSDSSDS 743

Query: 107 XXAQXXXXXXXXXXXXXXXXXPHHIDTDGSSDEAPLSRIVETDMSIKANQVDSPHNVMGV 166
             +                      D+  SSD +  S    +D +  +N  DS  +    
Sbjct: 744 SDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSN--SSDSNDSSNSSDSSDSSNSS 801

Query: 167 PNIVIVASLKPKLYTPEKKHNKRETTDNAQCTDSKTSTIDTKAED 211
            +     S      +     N  ++++++  +DS  S+  + + D
Sbjct: 802 DSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSD 846


>AL365181-9|CAI13053.1|  370|Homo sapiens G patch domain containing
           4 protein.
          Length = 370

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 182 PEKKHNKRETTDNAQCTDSKTSTIDTKAEDHREVNIK 218
           P+KK  KR   +  + T S+ +  D K  +H E NI+
Sbjct: 202 PKKKKKKRRQKEEEEATASERNDADEKHPEHAEQNIR 238


>AL365181-8|CAI13052.1|  234|Homo sapiens G patch domain containing
           4 protein.
          Length = 234

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 182 PEKKHNKRETTDNAQCTDSKTSTIDTKAEDHREVNIK 218
           P+KK  KR   +  + T S+ +  D K  +H E NI+
Sbjct: 143 PKKKKKKRRQKEEEEATASERNDADEKHPEHAEQNIR 179


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.309    0.123    0.341 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,662,522
Number of Sequences: 224733
Number of extensions: 853494
Number of successful extensions: 1706
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1670
Number of HSP's gapped (non-prelim): 28
length of query: 261
length of database: 73,234,838
effective HSP length: 89
effective length of query: 172
effective length of database: 53,233,601
effective search space: 9156179372
effective search space used: 9156179372
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 64 (29.9 bits)