Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001654-TA|BGIBMGA001654-PA|IPR007087|Zinc finger,
C2H2-type
(261 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p pro... 31 2.1
AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA... 31 2.1
AY113418-1|AAM29423.1| 660|Drosophila melanogaster RE17456p pro... 30 3.7
AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P... 29 4.9
AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-P... 29 4.9
AY061037-1|AAL28585.1| 359|Drosophila melanogaster HL07462p pro... 29 6.4
AF323977-1|AAL55992.1| 660|Drosophila melanogaster fused lobes ... 29 6.4
AE013599-1505|AAM68692.1| 660|Drosophila melanogaster CG8824-PC... 29 6.4
AE013599-1504|AAM68691.2| 673|Drosophila melanogaster CG8824-PB... 29 6.4
AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula... 29 8.5
AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula... 29 8.5
AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellula... 29 8.5
AE013599-1971|AAF58192.3| 1945|Drosophila melanogaster CG10228-P... 29 8.5
>AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p protein.
Length = 1265
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 18 LDSKYEKCLNITQEIYKRINITFQIKKLEAQSDLSNYSDQIDSNELSNGTDLFACDKTSI 77
L ++YE ++ ++ Y+ ++ Q+K+ E + + + ID+ E S +DL DK +
Sbjct: 1024 LQNEYEHAVDKWKQKYEETSLQLQLKEKEFEETMDHLQSDIDALE-SEKSDL--RDKLKL 1080
Query: 78 SSSTDAERP 86
+S+T +P
Sbjct: 1081 NSTTGKVQP 1089
>AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA
protein.
Length = 1265
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 18 LDSKYEKCLNITQEIYKRINITFQIKKLEAQSDLSNYSDQIDSNELSNGTDLFACDKTSI 77
L ++YE ++ ++ Y+ ++ Q+K+ E + + + ID+ E S +DL DK +
Sbjct: 1024 LQNEYEHAVDKWKQKYEETSLQLQLKEKEFEETMDHLQSDIDALE-SEKSDL--RDKLKL 1080
Query: 78 SSSTDAERP 86
+S+T +P
Sbjct: 1081 NSTTGKVQP 1089
>AY113418-1|AAM29423.1| 660|Drosophila melanogaster RE17456p
protein.
Length = 660
Score = 29.9 bits (64), Expect = 3.7
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 10 SWAITGERLDSKYEKCLNITQEI-YKRINITFQIKKLEAQSDLSNYSDQIDSNELSN 65
SW TG+ ++Y N+ + ++R+ + + KK ++ +++Q+D N+L N
Sbjct: 540 SWRATGDAACAQYRTWQNVYKHRPWERMRLDKKRKKQVLGGEVCMWTEQVDENQLDN 596
>AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA,
isoform A protein.
Length = 2894
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 47 AQSDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQAS 89
+++ S+ SD DS + S T + D T +SSST+A +++
Sbjct: 834 SEAPASSVSDSSDSTDASTETTGVSDDSTDVSSSTEASASEST 876
>AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-PB,
isoform B protein.
Length = 2772
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 47 AQSDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQAS 89
+++ S+ SD DS + S T + D T +SSST+A +++
Sbjct: 834 SEAPASSVSDSSDSTDASTETTGVSDDSTDVSSSTEASASEST 876
>AY061037-1|AAL28585.1| 359|Drosophila melanogaster HL07462p
protein.
Length = 359
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 10 SWAITGERLDSKYEKCLNITQEI-YKRINITFQIKKLEAQSDLSNYSDQIDSNELSN 65
SW TG+ + Y N+ + ++R+ + + KK ++ +++Q+D N+L N
Sbjct: 239 SWRATGDAACAPYRTWQNVYKHRPWERMRLDKKRKKQVLGGEVCMWTEQVDENQLDN 295
>AF323977-1|AAL55992.1| 660|Drosophila melanogaster fused lobes
protein.
Length = 660
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 10 SWAITGERLDSKYEKCLNITQEI-YKRINITFQIKKLEAQSDLSNYSDQIDSNELSN 65
SW TG+ + Y N+ + ++R+ + + KK ++ +++Q+D N+L N
Sbjct: 540 SWRATGDAACAPYRTWQNVYKHRPWERMRLDKKRKKQVLGGEVCMWTEQVDENQLDN 596
>AE013599-1505|AAM68692.1| 660|Drosophila melanogaster CG8824-PC,
isoform C protein.
Length = 660
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 10 SWAITGERLDSKYEKCLNITQEI-YKRINITFQIKKLEAQSDLSNYSDQIDSNELSN 65
SW TG+ + Y N+ + ++R+ + + KK ++ +++Q+D N+L N
Sbjct: 540 SWRATGDAACAPYRTWQNVYKHRPWERMRLDKKRKKQVLGGEVCMWTEQVDENQLDN 596
>AE013599-1504|AAM68691.2| 673|Drosophila melanogaster CG8824-PB,
isoform B protein.
Length = 673
Score = 29.1 bits (62), Expect = 6.4
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 10 SWAITGERLDSKYEKCLNITQEI-YKRINITFQIKKLEAQSDLSNYSDQIDSNELSN 65
SW TG+ + Y N+ + ++R+ + + KK ++ +++Q+D N+L N
Sbjct: 553 SWRATGDAACAPYRTWQNVYKHRPWERMRLDKKRKKQVLGGEVCMWTEQVDENQLDN 609
>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
matrix protein papilin3 protein.
Length = 2898
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 47 AQSDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQAS 89
+++ S+ SD DS + S T + D T +SSST+A +++
Sbjct: 834 SEAPASSVSDSSDSTDASPETTGVSDDSTDVSSSTEASASEST 876
>AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular
matrix protein papilin2 protein.
Length = 2776
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 47 AQSDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQAS 89
+++ S+ SD DS + S T + D T +SSST+A +++
Sbjct: 834 SEAPASSVSDSSDSTDASPETTGVSDDSTDVSSSTEASASEST 876
>AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellular
matrix protein papilinprotein.
Length = 2174
Score = 28.7 bits (61), Expect = 8.5
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 47 AQSDLSNYSDQIDSNELSNGTDLFACDKTSISSSTDAERPQAS 89
+++ S+ SD DS + S T + D T +SSST+A +++
Sbjct: 834 SEAPASSVSDSSDSTDASPETTGVSDDSTDVSSSTEASASEST 876
>AE013599-1971|AAF58192.3| 1945|Drosophila melanogaster CG10228-PA
protein.
Length = 1945
Score = 28.7 bits (61), Expect = 8.5
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 147 ETDMSIKANQVDSPHNVMGVPNIVIVASLKPKL---YTPEKKHNKRETTDNAQCTDSKTS 203
+TD + + ++ HN+ V + +AS+ K+ T N + N TDS+ S
Sbjct: 1742 DTDAELNGEKQEATHNLSAVGPALPLASIVNKIKINITKNTSSNSHNSASNTTTTDSQVS 1801
Query: 204 TI 205
I
Sbjct: 1802 AI 1803
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.309 0.123 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,094,775
Number of Sequences: 52641
Number of extensions: 347312
Number of successful extensions: 1118
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1113
Number of HSP's gapped (non-prelim): 13
length of query: 261
length of database: 24,830,863
effective HSP length: 84
effective length of query: 177
effective length of database: 20,409,019
effective search space: 3612396363
effective search space used: 3612396363
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 61 (28.7 bits)
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