Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001653-TA|BGIBMGA001653-PA|IPR003604|Zinc finger,
U1-type
(771 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 36 0.12
07_03_1726 - 29062654-29064414 36 0.16
04_03_0904 + 20717005-20718087 36 0.16
12_02_0299 - 17051570-17052474,17053542-17053755 35 0.28
03_06_0189 + 32214702-32215154 35 0.28
06_01_0486 - 3455030-3455770 34 0.49
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 34 0.49
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 33 0.65
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 33 0.65
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 33 0.86
07_01_0312 + 2214050-2214556 33 1.1
02_05_0584 - 30135768-30135790,30136104-30136866 33 1.1
12_02_0046 + 12830974-12832386 32 1.5
07_01_0310 + 2209084-2209554 32 1.5
01_01_0256 - 2083973-2084816,2084922-2086093 32 1.5
11_06_0284 + 21909758-21913645 32 2.0
06_03_0905 + 25843547-25844314 32 2.0
02_05_0999 + 33405982-33408279,33408356-33408466,33408551-334087... 32 2.0
02_05_0276 + 27378994-27380094,27380185-27380250,27380586-273806... 31 2.6
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 31 2.6
01_02_0007 + 10132380-10133201 31 2.6
08_01_0340 - 3008124-3009176 31 3.5
03_06_0579 + 34870958-34874578 31 3.5
01_01_1150 + 9161058-9162722,9162837-9162920,9163095-9163199,916... 31 3.5
07_03_1130 - 24187316-24187402,24188365-24188436,24188714-24189379 31 4.6
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 31 4.6
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 31 4.6
01_05_0083 - 17987239-17987317,17988412-17988530,17989195-179893... 31 4.6
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 30 6.1
01_01_0033 + 260562-260661,260895-260941,261582-261681,261925-26... 30 6.1
12_02_1174 - 26696869-26698191 30 8.0
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780... 30 8.0
09_02_0543 + 10427321-10428315,10428440-10429154 30 8.0
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 8.0
07_03_1721 - 29023979-29025295 30 8.0
03_06_0471 + 34169562-34169892,34170121-34170347 30 8.0
03_05_0677 + 26663880-26664581 30 8.0
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 35.9 bits (79), Expect = 0.12
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 394 PRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQGFWPVNFHN 453
P+P P P P P P + PG P P P P +P PPQ +WP+ F
Sbjct: 181 PKPGPKPKPPKPGPKPKPKPPK-PGPKPKPKP---PKPGPKPKPG---PPQPWWPIPFPK 233
Query: 454 PPAP 457
PP P
Sbjct: 234 PPCP 237
>07_03_1726 - 29062654-29064414
Length = 586
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 455 PAPYFPVNRAKDTNGHARSKEGEADTGDSHSEDEDDCYDKDQRIWYQDIYYRLLLKLNHE 514
PAP P + G A E + D D +D DD + ++R+W + ++ L +L
Sbjct: 37 PAPPPPQQQQVHEGGFAAEDESDGDDDDDDDDDVDDIEELERRMWRDRVRHKRLKELQQS 96
Query: 515 QFKR 518
+ R
Sbjct: 97 RAGR 100
>04_03_0904 + 20717005-20718087
Length = 360
Score = 35.5 bits (78), Expect = 0.16
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 6/102 (5%)
Query: 362 YVNQPTRSLRPYVAPI-FPLPMNFVPN-IPLGMYPRPAPFAIPNFPVPYVMPNYARAPGI 419
Y QP + P P P P + P P P+P P P P P P+Y P
Sbjct: 146 YKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTP-TPPSYKPQPKP 204
Query: 420 MPNFMPFR-LPFPMAYSRPRLCMPPQGFWPVNFHNPPAPYFP 460
P P+ P P +Y PP + P NPP Y P
Sbjct: 205 TPT--PYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKP 244
Score = 35.5 bits (78), Expect = 0.16
Identities = 29/96 (30%), Positives = 34/96 (35%), Gaps = 4/96 (4%)
Query: 366 PTRSLRPYVAPIFPLPMNFVPN-IPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFM 424
PT + Y P P + P P P+P P P P P P+Y P PN
Sbjct: 171 PTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTP-TPPSYKPQP--KPNPP 227
Query: 425 PFRLPFPMAYSRPRLCMPPQGFWPVNFHNPPAPYFP 460
P P P P P + P NPP Y P
Sbjct: 228 PTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKP 263
Score = 31.1 bits (67), Expect = 3.5
Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 14/110 (12%)
Query: 362 YVNQPTRSLRPYVAPIFPLPMNFVP----NIPLGMYPRPAPFAIPNF-PVPYVMPNYARA 416
Y QP + PY P P ++ P N P P+P P P + P P +
Sbjct: 198 YKPQPKPTPTPYTPT--PTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPK- 254
Query: 417 PGIMPNFMPFRLPFPMAYS------RPRLCMPPQGFWPVNFHNPPAPYFP 460
P P + P P P Y+ +P+ P + P NPP Y P
Sbjct: 255 PNPPPTYKPQPKPTPTPYTPPTYKPQPKPTPTPTPYTPTPKPNPPPTYKP 304
Score = 30.3 bits (65), Expect = 6.1
Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 11/101 (10%)
Query: 366 PTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMP 425
PT +P P P + P P P P P P P Y P P P
Sbjct: 259 PTYKPQPKPTPTPYTPPTYKPQPK----PTPTPTPYTPTPKPNPPPTYKPQPKPTPTPTP 314
Query: 426 FR---LPFPMAYSRPRLCMPPQGFWPV---NFHNPPAPYFP 460
++ P P Y+ P+ P + P +H PP Y P
Sbjct: 315 YKPQPKPTPSPYT-PKPTPTPPTYTPTPTPPYHKPPPSYTP 354
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 34.7 bits (76), Expect = 0.28
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 378 FPLPMNFVPNIPLGMYPRPAPFA-IPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSR 436
F P + P IP + P P PF P P+P++ P P P+ P A+
Sbjct: 219 FCTPRPWFPPIPF-LTPPPPPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPF 277
Query: 437 PRLCMPPQGFWPVNFHNPPAPYFP 460
P L P F P + PP P FP
Sbjct: 278 PHL---PPIFSPPSPPPPPPPAFP 298
Score = 33.1 bits (72), Expect = 0.86
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 7/70 (10%)
Query: 372 PYVAPIFPLPMNFVPNIPL-----GMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPF 426
P P FP P +P +P YP P P P P P P P + P F P+
Sbjct: 291 PPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFP--WPFPPLAPLFPPY 348
Query: 427 RLPFPMAYSR 436
P P YSR
Sbjct: 349 PSPPPSMYSR 358
Score = 31.1 bits (67), Expect = 3.5
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
P++ P P P F +P + P F P+ P + P+ P P PF PFP
Sbjct: 248 PFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPP---PPAFPF--PFP 302
Query: 432 MAYSRPRLCMPPQGFWPVNFHNPPAP 457
P P F+P PP P
Sbjct: 303 QLPPLPHF-PPLPSFYPSPPPPPPPP 327
Score = 29.9 bits (64), Expect = 8.0
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNF-PVPYVMPNYARAPGIMPNFMP-FRLP 429
P++ PIF P P P +P P +P+F P+P P+ P P P F P
Sbjct: 278 PHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWP 337
Query: 430 F-PMAYSRPRLCMPPQGFW 447
F P+A P PP +
Sbjct: 338 FPPLAPLFPPYPSPPPSMY 356
>03_06_0189 + 32214702-32215154
Length = 150
Score = 34.7 bits (76), Expect = 0.28
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 375 APIFPLP-MNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPN--FMPFRLPFP 431
AP LP + VP +P + P PA A+P +P MP P ++PN +P P
Sbjct: 34 APPAALPVLPAVPALPTTLPPMPAIPAVPQAALP-PMPAVPTVPAVVPNAAALPPMPAVP 92
Query: 432 MAYSRPRLCMPPQGFWPVNFHNPPAP 457
+ P++ +PP P PP P
Sbjct: 93 AIPAVPKVSLPPMPAVPA-VTLPPMP 117
>06_01_0486 - 3455030-3455770
Length = 246
Score = 33.9 bits (74), Expect = 0.49
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 360 HYYVNQPTRSLR-PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPG 418
H++ ++P S R P P + P P P P P P+ P P P P Y P
Sbjct: 60 HHHHHKPPPSPRCPSCHPPYTPPTPRPPPTP-PYVPSPPPYVPPYIPPP--TPPYV-PPY 115
Query: 419 IMPNFMPFRLPFPMAYSRPRLCMPPQGFWPVNFHNPPAP 457
I P P+ +P P S P PP P + PP+P
Sbjct: 116 IPPPTPPY-VPPPTPPSPPPYVPPPTPPSPPPYVPPPSP 153
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 33.9 bits (74), Expect = 0.49
Identities = 37/97 (38%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 376 PIFPLPMNFVPNIPL--GMYPR--PAPFAIPNFP-VPYV--MPNYARAPGIMP--NFMPF 426
P PL + VP PL G+ P PAP IP +P P V MP PG MP + P
Sbjct: 92 PGMPLGVPQVPGAPLMPGVRPPILPAP-GIPGYPGAPNVPTMPQTGAPPGSMPPGSMPPG 150
Query: 427 RLPFPMA-YSRPRLCMPPQGFWP----VNFHNPPAPY 458
+P MA RP PP P N PPA Y
Sbjct: 151 SMPMQMAPLPRPPTLPPPTSGAPGAPIPNSGAPPAMY 187
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 33.5 bits (73), Expect = 0.65
Identities = 33/98 (33%), Positives = 38/98 (38%), Gaps = 9/98 (9%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYV--MPNYARAPGIMPNFMPFRLP 429
PY IFP P + P P P P +A P P YV P YA P + + P P
Sbjct: 673 PYPPGIFPSPPEYSPE-PPSYVPSPPQYA-PQ-PPSYVPSPPEYAPEPPVYAPYPPGITP 729
Query: 430 FPMAYSRPRLCMPPQG----FWPVNFHNPPAPYFPVNR 463
P Y+ PP G PV F P A P R
Sbjct: 730 SPPEYAPEPPPGPPGGGGGYLPPVVFPPPYASRGPPGR 767
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 33.5 bits (73), Expect = 0.65
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 9/75 (12%)
Query: 406 VPYVMPNYARAPGIMPNFMPF-RLPFPM---AYSRPRLCMPPQGFWPVNFHNPPAPYFPV 461
VP+ PN A PG+ P+ P R+PFP A+S+P +P +G + H P PV
Sbjct: 1005 VPFGPPNGAHKPGVHPSGYPLPRMPFPPFAGAHSQP-YAIPTRG----SLHGPIGAVPPV 1059
Query: 462 NRAKDTNGHARSKEG 476
+ + N R G
Sbjct: 1060 PQPGNRNFGPRGNTG 1074
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 33.1 bits (72), Expect = 0.86
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 396 PAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQGFWPVNFHNPP 455
P PFA P PV P + PG+MP+ P L RP PP G P P
Sbjct: 80 PPPFARPAAPVQQQPPPFGGPPGVMPS-QP--LQQQQQQQRPAFGGPPSGAPPAQAQRTP 136
>07_01_0312 + 2214050-2214556
Length = 168
Score = 32.7 bits (71), Expect = 1.1
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 372 PYVAPIFPLPMNFVPNIP-LGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLP- 429
P V + PM VP +P + P ++P P +PN P MP LP
Sbjct: 82 PAVPKVALPPMPAVPAVPTVPAVPAVPAASLPPMPAVPAVPNAVLPP--MPAVPKVTLPP 139
Query: 430 FPMAYSRPRLCMPPQGFWPVNFHNPP 455
P + P++ +PP P+ F PP
Sbjct: 140 MPSMPAVPKVTLPPMPSVPMPFLAPP 165
Score = 32.3 bits (70), Expect = 1.5
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Query: 375 APIFPLP-MNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMA 433
A + P+P + VPN L P A+P P +P P + +P P P
Sbjct: 62 ATLPPMPAVPTVPNAALPPMPAVPKVALPPMPAVPAVPTVPAVPAVPAASLP---PMPAV 118
Query: 434 YSRPRLCMPPQGFWPVNFHNPPAPYFP 460
+ P +PP P PP P P
Sbjct: 119 PAVPNAVLPPMPAVP-KVTLPPMPSMP 144
>02_05_0584 - 30135768-30135790,30136104-30136866
Length = 261
Score = 32.7 bits (71), Expect = 1.1
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 14/84 (16%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPA-----PFAIPN-FPVPYVMPNYARAPGIMPNFMP 425
P+ P FPLP+ P P P + PF +P+ P+P A AP + +P
Sbjct: 94 PFPLP-FPLPLP-APGSPAAGAPPSSGSSGFPFPMPSPLPLPAHGSPAAGAPPSSGSGLP 151
Query: 426 FRLPFPM------AYSRPRLCMPP 443
F LPFP+ A +P+ CM P
Sbjct: 152 FPLPFPLPQPSSPAQPQPKECMTP 175
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
Query: 376 PIFPLPMNFVPNIPLGMYPRPA-------PFAIPNFPVPYVMPNYARAPGIMPNFMPFRL 428
P+FP M +P P G P PF +P FP+P P + A G P+
Sbjct: 65 PLFPFLMFPIPGSPAGAGGAPPSAGSGGFPFPLP-FPLPLPAPG-SPAAGAPPSSGSSGF 122
Query: 429 PFPMAYSRP 437
PFPM P
Sbjct: 123 PFPMPSPLP 131
>12_02_0046 + 12830974-12832386
Length = 470
Score = 32.3 bits (70), Expect = 1.5
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 394 PRPAPFA------IPNFPV-PYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQGF 446
PRPAP + +P +P+ P+ P AP P F P P P S + P Q +
Sbjct: 319 PRPAPPSRRVMAPLPPYPMDPFETPPSPHAPRHDP-FEPPPSPDPPIQSYA-IDPPIQSY 376
Query: 447 WPVNFHNPPAPYFPVNRAKDTNGHARSKEGEADTGD 482
F PP+PY P + D + RS E + + D
Sbjct: 377 AMDPFEQPPSPYAP-HGVDDMDEFTRSLEAQLEEAD 411
Score = 31.9 bits (69), Expect = 2.0
Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 365 QPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFM 424
+P R +AP+ P PM+ P PR PF P P P + +YA P I M
Sbjct: 320 RPAPPSRRVMAPLPPYPMDPFETPPSPHAPRHDPFEPPPSPDPPIQ-SYAIDPPIQSYAM 378
Query: 425 -PFRLPFPMAYS 435
PF P P Y+
Sbjct: 379 DPFEQP-PSPYA 389
>07_01_0310 + 2209084-2209554
Length = 156
Score = 32.3 bits (70), Expect = 1.5
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 372 PYVAPIFPLPMNFVPNIPLG-MYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPF 430
P V + PM VP +P + P PA A+PN +P + P + +P P
Sbjct: 79 PTVPAVALPPMPAVPAVPTATLPPMPAVPAVPNAVLPPI-------PAVPKVTLP---PM 128
Query: 431 PMAYSRPRLCMPPQGFWPVNFHNPP 455
P + P++ +PP P+ F PP
Sbjct: 129 PSIPAVPKVTLPPMPSVPMPFLAPP 153
>01_01_0256 - 2083973-2084816,2084922-2086093
Length = 671
Score = 32.3 bits (70), Expect = 1.5
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
Query: 388 IPL-GMYPRPAPFAIPNFPVPYVMPNYARAPGIMPN----FMPFRLPFPMAYSRP--RLC 440
IP+ Y P P P P+P +P ++ PN ++P R P AYS P
Sbjct: 489 IPIQSYYHHPVPQQAPQPPMPQPVPQPQQSHAFDPNTGMYYIPMRTNAPQAYSMPPGAAA 548
Query: 441 MPPQGFWPVNFHNPPAPYFPV 461
+PP P P P P+
Sbjct: 549 VPP----PTLVDTTPKPTVPI 565
>11_06_0284 + 21909758-21913645
Length = 1295
Score = 31.9 bits (69), Expect = 2.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 469 GHARSKEGEADTGDSHSEDEDDCYDKD 495
G KEG + G+ ED+DD YD D
Sbjct: 494 GQNEEKEGRKEVGEEEKEDDDDDYDDD 520
>06_03_0905 + 25843547-25844314
Length = 255
Score = 31.9 bits (69), Expect = 2.0
Identities = 28/91 (30%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Query: 376 PIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPF----P 431
P P P P P PRP P +P P P AP +P P + P P
Sbjct: 43 PSHPSPSPGHPKGPKNPTPRPPKG--PTYPSPVTRPPPLVAPPKVPVTHPPKGPVTRPPP 100
Query: 432 MAYSRPRLCMPPQGFW-PVNFHNPPAPYFPV 461
+ Y P + PP PV + PP PV
Sbjct: 101 VTYPTPPVTTPPVVVGPPVTYPTPPVTTPPV 131
>02_05_0999 +
33405982-33408279,33408356-33408466,33408551-33408703,
33408870-33409033,33409113-33409210,33409296-33409474,
33409588-33409675,33410285-33410451
Length = 1085
Score = 31.9 bits (69), Expect = 2.0
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 342 GISNCFRRPQNMNHVNFSHYYVNQPTRSLRPYVAPIFPLPM-NFV-------PNIP-LGM 392
G ++ QN+ + N P + PY +P P+P NFV P IP +
Sbjct: 484 GADPFYQMQQNLPPLQSLRRRANSPVHTGSPYESPHLPIPNGNFVRNTGDVSPRIPGMPA 543
Query: 393 YPR-PAPFAIPNFPVPY 408
Y R P P+ PN +PY
Sbjct: 544 YDRIPNPWPSPNGSIPY 560
>02_05_0276 +
27378994-27380094,27380185-27380250,27380586-27380660,
27381927-27382025,27382353-27382436,27382519-27382868,
27383190-27383406,27383579-27383658,27383760-27383850,
27386544-27386672,27388771-27388858,27389967-27390097
Length = 836
Score = 31.5 bits (68), Expect = 2.6
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 385 VPNIPLGMYPRPA--PFAIPN-FPVP--YVMPNYARAPGIMPNFMPFRLPF 430
+P P P+P P ++P FP P M R PG+ P MP + PF
Sbjct: 247 IPRTPQQQQPQPDMWPHSMPPIFPRPRGMTMQGMQRVPGVPPGLMPLQRPF 297
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 31.5 bits (68), Expect = 2.6
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Query: 379 PLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPR 438
P+P + +P YP P N+P+ + P + AP P F PF Y P
Sbjct: 478 PVPAGPMTAVPYNSYPVFPPM---NYPMVNIPPPFPSAPNTPPGFQGLAGPF---YGPPY 531
Query: 439 LCMPPQGFWPVN 450
PP P+N
Sbjct: 532 PAPPPPPPPPMN 543
>01_02_0007 + 10132380-10133201
Length = 273
Score = 31.5 bits (68), Expect = 2.6
Identities = 37/153 (24%), Positives = 55/153 (35%), Gaps = 5/153 (3%)
Query: 309 ICNVFMKSNDLSDHVESLSHMLLLTKSMEKCNPGISNCFRRPQNMNHVNFSHYYVNQPTR 368
+ + + L D + + +H + ++ + N +PQ + N + P
Sbjct: 17 VLQLLLAGGSLVDDLPAATHQVPRLVGPQRKLQQLPNPRPQPQPLPQPNPNPQPQPLPQP 76
Query: 369 SLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRL 428
+P P PLP PL P P P +P P P PN P PN P
Sbjct: 77 QPQPQPQPQ-PLPQPQPQPQPL---PLPGPQPLPQ-PGPQPNPNPQPLPQPNPNPQPLPQ 131
Query: 429 PFPMAYSRPRLCMPPQGFWPVNFHNPPAPYFPV 461
P P A P P P+ +P AP P+
Sbjct: 132 PDPNAPPLPLPQPNPNNPQPLPQPDPNAPSLPL 164
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 375 APIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAY 434
AP PLP PN P P+P P PN P P P+ P +P P P P+
Sbjct: 171 APPLPLPQPD-PNAP----PQPLPQPDPNNPQPLPQPDPNAPPQPLPQPDPNSPPQPLPQ 225
Query: 435 SRP 437
P
Sbjct: 226 PDP 228
>08_01_0340 - 3008124-3009176
Length = 350
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 444 QGFWPVNFHNPPAPYFPVNRAKDTNGHARSKEGEADTGDS-HSEDEDD 490
QGF + HNP P + ++ TNG ++ + +T +S H ED DD
Sbjct: 261 QGFSNM-LHNPGNSREPSSTSQSTNGSLHKEDADENTRESLHKEDVDD 307
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 443 PQGFWPVNFHNPPAPYFPVNRAKDTNGHARSKE----GEADTGDSHSEDEDDCYDKDQRI 498
P + + F PP P+F ++ + H R G+ D + +EDE+D D DQ
Sbjct: 806 PANLFSLRFRMPPLPHF-LSSLLQSREHPRCAADQDVGDIDPDELINEDEED--DYDQLP 862
Query: 499 WYQDIYYRLLLKLNHEQFKRLFE 521
++ + + KL+ EQ K F+
Sbjct: 863 PFKPLSKSQVAKLSKEQQKLYFD 885
>01_01_1150 +
9161058-9162722,9162837-9162920,9163095-9163199,
9163310-9163418,9163956-9164107,9164210-9164356
Length = 753
Score = 31.1 bits (67), Expect = 3.5
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 379 PLPMNFV-PNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRP 437
P PM + PNIP P +P FP P V P AR + +P LP P +
Sbjct: 315 PGPMQHIGPNIPHSPGPLLPGVFVPPFPGPLVWPG-ARGVDVNMLSVPPNLPIPPVAAEH 373
Query: 438 RLCMPPQGFWP 448
R P G P
Sbjct: 374 RFA-PSMGAGP 383
>07_03_1130 - 24187316-24187402,24188365-24188436,24188714-24189379
Length = 274
Score = 30.7 bits (66), Expect = 4.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 471 ARSKEGEADTGDSHSEDEDDCYDKDQRIW 499
A +KEGE D G+ +D+DD + + +W
Sbjct: 119 AAAKEGEEDDGEEDDDDDDDEFGDGEWLW 147
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 418 GIMPNFMP-FRLPFPMAYSRPRLCMPPQGFWPVNFHNP 454
G PNF+P +P+ M + PP G P + HNP
Sbjct: 473 GFQPNFVPNMMMPYNMQRQPGQRSGPPHGGMPRHLHNP 510
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 30.7 bits (66), Expect = 4.6
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 9/99 (9%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPN-YARAPGIMPNFMPFRLPF 430
P P P + +G P P P + PVP+ P YA P P + P
Sbjct: 402 PTYPPADPAAGGYTSQPYMGAPPPPPPGSYA--PVPWGQPPPYASYPPPPPGSSMYNPPP 459
Query: 431 PMAYSRPRLCMPPQGFWPVNFHNPPAPYFPVNRAKDTNG 469
P P PP + V + PPAP P A T+G
Sbjct: 460 PA----PGQATPPP--YGVQYAPPPAPIPPPGTAPSTDG 492
>01_05_0083 -
17987239-17987317,17988412-17988530,17989195-17989304,
17989422-17989617
Length = 167
Score = 30.7 bits (66), Expect = 4.6
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 358 FSHYYVNQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARA 416
FSH+ + R+L P +AP L + P +PLG Y A F P P V P +A
Sbjct: 23 FSHHALEWALRNLAPTIAPPL-LVLTVQPLLPLG-YVSAASFGSP-LGTPVVAPELIKA 78
>01_07_0084 +
40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 359 SHYYVNQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYAR 415
+H V +P R+L P A LP VP I L + AIP P+ + P A+
Sbjct: 165 AHAQVIEPLRTLEPLEAQQISLPHLVVPQISLQLPVVLQSCAIPVAPIGVMQPTEAK 221
>01_01_0033 +
260562-260661,260895-260941,261582-261681,261925-262181,
262525-262640,263014-263098,264236-264415,264740-264817,
264909-264970,265138-265246,266237-266514,266591-266657,
266734-266802,266880-266981,267309-267443
Length = 594
Score = 30.3 bits (65), Expect = 6.1
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 465 KDTNGHARSKEGEADTGDSHSEDEDDCYDKDQRI 498
KD N R K D G+ +DEDD Y++ +RI
Sbjct: 108 KDKNSWGRGKNAYYDAGEQSGDDEDD-YEEARRI 140
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 8.0
Identities = 33/103 (32%), Positives = 39/103 (37%), Gaps = 11/103 (10%)
Query: 366 PTR--SLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFP--VPYVM---PNYARAPG 418
PTR S++P V P P P +P P P P P P P V+ P P
Sbjct: 195 PTRPPSVKPPVVQPKPQPP---PTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPP 251
Query: 419 IMPNFMPFRL-PFPMAYSRPRLCMPPQGFWPVNFHNPPAPYFP 460
P MP L P P L PP+ +W PP P P
Sbjct: 252 RAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKP 294
>11_06_0632 +
25674807-25675477,25676472-25677861,25677948-25678083,
25678185-25678282,25678470-25678535,25678699-25678827,
25679570-25679746,25680576-25680614
Length = 901
Score = 29.9 bits (64), Expect = 8.0
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 460 PVNRAKDTNGHARSKEGEADTGDSHSEDEDDCYDKDQRIWYQDIY 504
P ++A+D+N S G + G S +ED D K Q Y DIY
Sbjct: 327 PPSKARDSNPLHGSMNGNSARGSS-TEDLGDAKTKSQSARYSDIY 370
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.9 bits (64), Expect = 8.0
Identities = 27/79 (34%), Positives = 30/79 (37%), Gaps = 4/79 (5%)
Query: 386 PNIP-LGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQ 444
P IP G P PAP P P P P + AP P+ P P P A P P
Sbjct: 28 PAIPESGPPPPPAPDMPPPPPTP--APQSSPAPPPAPDMTPPPGPGPAAAPSPHSPSPSN 85
Query: 445 GFWPVNFHN-PPAPYFPVN 462
W + PP P P N
Sbjct: 86 APWVAPAADIPPPPPPPPN 104
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.9 bits (64), Expect = 8.0
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 8/96 (8%)
Query: 379 PLPMNFVPNIPLGMYPRPAPFAIP--NFPVPYVMP--NYARAPGIMPNFMPFRLPFPMAY 434
PLP++ P PL P P P P P+P P P + P+ P P P+
Sbjct: 1131 PLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPS 1190
Query: 435 SRPRLCMPPQGFWPVNFHNPPAPYFPVNRAKDTNGH 470
P PP P+ PP P PV + + G+
Sbjct: 1191 GPPPQPAPP----PLPIQPPPIPPPPVPSSPSSLGY 1222
>07_03_1721 - 29023979-29025295
Length = 438
Score = 29.9 bits (64), Expect = 8.0
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 364 NQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPN 412
N T S++ + P+ P+P + P IP ++P +P+ + P++ PN
Sbjct: 280 NGSTASVQWSMPPVMPVP-GYFPVIPSSVWPFISPWPNGAWSSPWIQPN 327
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 29.9 bits (64), Expect = 8.0
Identities = 22/70 (31%), Positives = 26/70 (37%), Gaps = 2/70 (2%)
Query: 391 GMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQGFWPVN 450
G YP P A P P PG P+ P + +P A P PP G+ P
Sbjct: 19 GAYPSGYPGAYPLMQGYPNSPGQYPTPGGYPSAPPGQ--YPPAGGYPGAQYPPSGYPPSQ 76
Query: 451 FHNPPAPYFP 460
PP Y P
Sbjct: 77 GGYPPGAYPP 86
>03_05_0677 + 26663880-26664581
Length = 233
Score = 29.9 bits (64), Expect = 8.0
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 380 LPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMP 425
+P +PN P G P AP A PN + PN P M +P
Sbjct: 91 IPEADIPNRPTGQRPATAPQADPNNNFAHANPNANANPWFMGTGVP 136
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.137 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,007,691
Number of Sequences: 37544
Number of extensions: 966413
Number of successful extensions: 2387
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2336
Number of HSP's gapped (non-prelim): 73
length of query: 771
length of database: 14,793,348
effective HSP length: 88
effective length of query: 683
effective length of database: 11,489,476
effective search space: 7847312108
effective search space used: 7847312108
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -