GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001653-TA|BGIBMGA001653-PA|IPR003604|Zinc finger,
U1-type
         (771 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    36   0.005
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       27   2.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   5.7  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   7.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   7.5  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    25   10.0 
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    25   10.0 

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 35.5 bits (78), Expect = 0.005
 Identities = 41/135 (30%), Positives = 52/135 (38%), Gaps = 24/135 (17%)

Query: 376 PIFP-LPMNFVPNIPLGMYPR---------------PAPFAIPN---FPVPYVMPNYARA 416
           P+ P +P   VP +  GM PR               P P   PN    P P + P  +  
Sbjct: 227 PMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNL 286

Query: 417 PGIMPNFM--PFRLPFPMAYSRPRLCMPPQGFWPVNFHNPPAPYFPVNRAKDTNGHARSK 474
            G MP+ M  P R P PM    P    PPQG  P NF+N P      +R    N +    
Sbjct: 287 SGGMPSGMVGPPRPPMPMQGGAPG--GPPQGMRP-NFYNRPMGDPQTSRPPSGNDNMGGG 343

Query: 475 EGEADTGDSHSEDED 489
              +    S  +DED
Sbjct: 344 PPPSSATPSVDDDED 358



 Score = 33.1 bits (72), Expect = 0.028
 Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 5/72 (6%)

Query: 386 PNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQG 445
           P  P GMYP+P    +P  P    MP  A  PG+ P   P R P      RP +   P  
Sbjct: 211 PPRPGGMYPQPPGVPMPMRP---QMPPGA-VPGMQPGMQP-RPPSAQGMQRPPMMGQPPP 265

Query: 446 FWPVNFHNPPAP 457
             P N    P P
Sbjct: 266 IRPPNPMGGPRP 277


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 26.6 bits (56), Expect = 2.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 340 NPGISNCFRRPQNMNHVNFSHYYVNQPTRSLRPYVAP 376
           +PG+  CF R +     + + YY+N   R  +P   P
Sbjct: 132 DPGVQQCFARSREYQLNDSAAYYLNSLDRISQPAYIP 168


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.4 bits (53), Expect = 5.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 470  HARSKEGEADTGDSHSEDEDDCYDKD 495
            HA S  GE    D   +DEDD  D D
Sbjct: 1814 HADSNGGEDGNEDDDEDDEDDDDDDD 1839


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.0 bits (52), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 211 KTVTSLGGFGDVDTD-KTHGEIVVRPFDVGLVI 242
           KT+T+L    D  T   THG +V+RP D   V+
Sbjct: 54  KTMTALPDLEDYWTGIVTHGYLVIRPKDHNYVV 86


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 7.5
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 211 KTVTSLGGFGDVDTD-KTHGEIVVRPFDVGLVI 242
           KT+T+L    D  T   THG +V+RP D   V+
Sbjct: 54  KTMTALPDLEDYWTGIVTHGYLVIRPKDHNYVV 86


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 24.6 bits (51), Expect = 10.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 552 CFYKIKSSCYHTLVEIGRSAKYCF 575
           C+ ++KS C    V  GR  + CF
Sbjct: 234 CYRRLKSECQDECVLAGRFLRECF 257


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 10.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 552 CFYKIKSSCYHTLVEIGRSAKYCF 575
           C+ ++KS C    V  GR  + CF
Sbjct: 234 CYRRLKSECQDECVLAGRFLRECF 257


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.137    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 798,239
Number of Sequences: 2123
Number of extensions: 33943
Number of successful extensions: 70
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 15
length of query: 771
length of database: 516,269
effective HSP length: 69
effective length of query: 702
effective length of database: 369,782
effective search space: 259586964
effective search space used: 259586964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 51 (24.6 bits)