Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001653-TA|BGIBMGA001653-PA|IPR003604|Zinc finger,
U1-type
(771 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 27 0.76
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 5.4
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 7.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 9.4
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 9.4
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 9.4
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 9.4
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 9.4
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 9.4
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 9.4
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 23 9.4
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 23 9.4
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 23 9.4
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 23 9.4
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 23 9.4
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 23 9.4
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 23 9.4
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 9.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 9.4
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 26.6 bits (56), Expect = 0.76
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 421 PNFMPFRLPFPMAYSRPRLC--MPPQGFWPVNFHNPPAPYFP 460
P P +P P P MP F P NF NPP P+ P
Sbjct: 1131 PFTSPGGIPGPNGIKMPSFMEGMPHLPFTPFNFWNPP-PFMP 1171
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 23.8 bits (49), Expect = 5.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 464 AKDTNGHARSKEGEADTGDSHSEDEDD 490
A + NG A + E D D +D+DD
Sbjct: 378 AMNANGEAVGEVDEDDDDDGDDDDDDD 404
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.4 bits (48), Expect = 7.1
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 48 LLTCEMYLTRHQWNTLAVVGRQLSCAVCDQLCEA-NAFSEHISSEH--HVRNMEKFEPLE 104
+LT L RH N ++ C +C ++ + N+ H S H H +N ++ + +E
Sbjct: 11 ILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSKNEQQRKEME 70
Query: 105 EFGPTITRKIRQRYH 119
+ R+ QR H
Sbjct: 71 QMR---EREREQREH 82
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 121 HIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 121 HIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 121 HIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 121 HIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 121 HIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 121 HIGPLTPFPPRFIPPDMYRLRPPPNP 146
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 121 HIGPLTPFPPRFIPPDMYRLRPPPNP 146
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 370 HIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 370 HIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 370 HIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 370 HIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 370 HIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 370 HIGPLTPFPPRFIPPDMYRLRPPPNP 395
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 369 HIGPLTPFPPRFIPPDMYRLRPPPNP 394
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 354 HIGPLTPFPPRFIPPDMYRLRPPPNP 379
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 9.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAP 398
++ P+ P P F+P + P P P
Sbjct: 370 HIGPLTPFPPRFIPPDMYRLRPPPNP 395
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.322 0.137 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,071
Number of Sequences: 429
Number of extensions: 11933
Number of successful extensions: 50
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 28
length of query: 771
length of database: 140,377
effective HSP length: 63
effective length of query: 708
effective length of database: 113,350
effective search space: 80251800
effective search space used: 80251800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)
- SilkBase 1999-2023 -