Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001653-TA|BGIBMGA001653-PA|IPR003604|Zinc finger,
U1-type
(771 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 38 0.025
At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99... 38 0.025
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 35 0.23
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 34 0.31
At2g34870.1 68415.m04281 hydroxyproline-rich glycoprotein family... 33 0.54
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 33 0.54
At5g06640.1 68418.m00750 proline-rich extensin-like family prote... 33 0.95
At3g24506.1 68416.m03075 expressed protein 33 0.95
At2g17240.1 68415.m01991 expressed protein 33 0.95
At1g60200.1 68414.m06781 splicing factor PWI domain-containing p... 33 0.95
At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid t... 32 1.2
At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid t... 32 1.2
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 32 1.7
At1g01440.1 68414.m00059 extra-large G-protein-related weak simi... 32 1.7
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 31 2.2
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 31 2.2
At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein ... 31 2.2
At4g08410.1 68417.m01390 proline-rich extensin-like family prote... 31 2.9
At2g24450.1 68415.m02922 fasciclin-like arabinogalactan family p... 31 2.9
At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family... 31 2.9
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 31 3.8
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 31 3.8
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 31 3.8
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 31 3.8
At4g08400.1 68417.m01388 proline-rich extensin-like family prote... 30 5.0
At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family pr... 30 5.0
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 30 5.0
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 30 6.7
At4g01290.1 68417.m00170 expressed protein 30 6.7
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 30 6.7
At3g02670.1 68416.m00258 proline-rich family protein contains pr... 30 6.7
At5g49080.1 68418.m06074 proline-rich extensin-like family prote... 29 8.8
At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 29 8.8
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 29 8.8
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 29 8.8
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 29 8.8
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 29 8.8
At1g55390.1 68414.m06335 DC1 domain-containing protein similar t... 29 8.8
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 37.9 bits (84), Expect = 0.025
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ +G PAP+ + P P P Y+ +P + N+ P P
Sbjct: 205 PYVYSFPPPPPYYSPSPKVGYKSPPAPYVYSSPPPP---PYYSPSPKV--NYK--SPPPP 257
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
YS P PP + P V F +PP PY
Sbjct: 258 YVYSSP----PPPPYSPSPKVEFKSPPPPY 283
Score = 33.5 bits (73), Expect = 0.54
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPN-FMPFRL-P 429
PYV P P + P+ + P P+ + P PYV + P P+ + ++ P
Sbjct: 308 PYVYSSPPPPTYYSPSPRVDYKSPPPPYVYNSLPPPYVYNSPPPPPYYSPSPTVNYKSPP 367
Query: 430 FPMAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
P Y+ P PP + P V + +PP PY
Sbjct: 368 PPYVYNSP---PPPPYYSPFPKVEYKSPPPPY 396
>At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 489
Score = 37.9 bits (84), Expect = 0.025
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 393 YPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQGFWPVNFH 452
YP+ P + N+P P P YA AP P P P P + P+ P +
Sbjct: 24 YPQYGPDSY-NYPPP---PTYAPAPSPAPAPAPVPAPSPASSYGPQYSQEGYASQP---N 76
Query: 453 NPPAP-YFPVNRAKDTNGHARSKEGEA 478
NPP P Y P + GH S+EG A
Sbjct: 77 NPPPPTYAPAPSPASSYGHQYSQEGYA 103
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 34.7 bits (76), Expect = 0.23
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 360 HYYVNQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGI 419
+ Y + P + P P P +V P +Y P P+A P PYV Y P +
Sbjct: 142 YVYSSPPPYAYSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYV---YKSPPYV 198
Query: 420 MPNFMPFRL-PFPMAYSRPR----LCMPPQGFW---PVNFHNPPAPY 458
+ P+ P P AYS P PP + P + PP+PY
Sbjct: 199 YSSPPPYAYSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 245
Score = 34.7 bits (76), Expect = 0.23
Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 6/101 (5%)
Query: 360 HYYVNQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGI 419
+ Y + P + P P P +V P +Y P P+A P PYV +
Sbjct: 197 YVYSSPPPYAYSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSS 256
Query: 420 MPNFMPFRLPFPMAYSRPR--LCMPPQGFWPVNFHNPPAPY 458
P + P P Y P PP P + PP+PY
Sbjct: 257 PPPYAYSPPPSPYVYKSPPYVYSSPP----PYAYSPPPSPY 293
Score = 33.9 bits (74), Expect = 0.41
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 379 PLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPR 438
P P +V P +Y P P+A P PYV + P ++ + P P AYS P
Sbjct: 98 PPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYV-YSSPPPYAYSPPP 156
Query: 439 LCMPPQGFWPVNFHNPPAPY 458
P P + +PP Y
Sbjct: 157 YAYSPPPS-PYVYKSPPYVY 175
Score = 32.7 bits (71), Expect = 0.95
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 379 PLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPR 438
P P +V P +Y P P+A P PYV + P + P P Y P
Sbjct: 50 PPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPP 109
Query: 439 --LCMPPQGFWPVNFHNPPAPY 458
PP P + PP+PY
Sbjct: 110 YVYSSPP----PYAYSPPPSPY 127
Score = 32.7 bits (71), Expect = 0.95
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 379 PLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPR 438
P P +V P +Y P P+A P PYV + P + P P Y P
Sbjct: 264 PPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPP 323
Query: 439 --LCMPPQGFWPVNFHNPPAPY 458
PP P + PP+PY
Sbjct: 324 YVYSSPP----PYAYSPPPSPY 341
Score = 31.5 bits (68), Expect = 2.2
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Query: 379 PLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPR 438
P P +V P +Y P P+A P PYV + P + P P Y P
Sbjct: 312 PPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPYVYKSPP 371
Query: 439 LCM---PPQGFWPVNF-HNPPAP 457
PP + P + ++PP P
Sbjct: 372 YVYSSPPPYTYSPPPYAYSPPPP 394
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 34.3 bits (75), Expect = 0.31
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 11/90 (12%)
Query: 372 PYVAPI---FPLPMNFVPNIPLGMYPRPAPFAIPNF-PVPYVMPNYARAPGIMPNFMPFR 427
PY +P PLP VP P + P P PF+ P+ P P+ P + P P+ P
Sbjct: 9 PYYSPPSHQHPLPSP-VPPPPSHISPPPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHP-- 65
Query: 428 LPFPMAYSRPRLCMPPQGFWPVNFHNPPAP 457
P P Y P PP P PP P
Sbjct: 66 -PPPSPYPHPHQPPPPPHVLP---PPPPTP 91
>At2g34870.1 68415.m04281 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 116
Score = 33.5 bits (73), Expect = 0.54
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 380 LPMNFVPNIPL---GMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSR 436
LP VP +P P P P IP P P+ P AP +P F F P P+ +
Sbjct: 55 LPFGGVPPLPSLFPPFVPSPFPGNIPRLPFPFPFPTSPPAPS-LPGFPGFTFP-PLPFLT 112
Query: 437 P 437
P
Sbjct: 113 P 113
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 33.5 bits (73), Expect = 0.54
Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P+++ P+ + P P+ + P PY P+ P P P
Sbjct: 34 PYVYSSPPPPLSYSPSPKVDYKSPPPPYVYSSPPPPYYSPS--------PKVEYKSPPPP 85
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
YS P PP + P V++ +PP PY
Sbjct: 86 YVYSSP----PPPYYSPSPKVDYKSPPPPY 111
Score = 33.1 bits (72), Expect = 0.72
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 361 YYVNQPTRSLR----PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARA 416
YY P S + PYV P P + P+ L P P+ + P PY P+
Sbjct: 420 YYSPSPKPSYKSPPPPYVYSS-PPPPYYSPSPKLTYKSSPPPYVYSSPPPPYYSPSPKVV 478
Query: 417 PGIMPNFMPFRLPFPMAYS---RPRLCMPPQGFWPVNFHNPPAPYF 459
P + P P YS +P PP P +++PP PY+
Sbjct: 479 YKSPPPPYVYSSPPPPYYSPSPKPSYKSPPP---PYVYNSPPPPYY 521
Score = 31.9 bits (69), Expect = 1.7
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P P+ P P P+ + P PY P+ A P + P P
Sbjct: 260 PYVYSSPPPPYYSPSPKPIYKSP-PPPYVYNSPPPPYYSPSPKPAYKSPPPPYVYSFPPP 318
Query: 432 MAYS---RPRLCMPPQGFWPVNFHNPPAPYF 459
YS +P PP P +++PP PY+
Sbjct: 319 PYYSPSPKPVYKSPPP---PYVYNSPPPPYY 346
Score = 31.5 bits (68), Expect = 2.2
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 6/91 (6%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ P P+ + P PY P P + P P
Sbjct: 561 PYVYHSPPPPPYYSPSPKPAYKSSPPPYVYSSPPPPYYSPAPKPVYKSPPPPYVYNSPPP 620
Query: 432 MAYS---RPRLCMPPQGFWPVNFHNPPAPYF 459
YS +P PP P + +PP PY+
Sbjct: 621 PYYSPSPKPTYKSPPP---PYVYSSPPPPYY 648
Score = 29.9 bits (64), Expect = 6.7
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 14/90 (15%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ + P P+ + P PY P+ P P P
Sbjct: 737 PYVYSSPPPPPYYSPSPKVEYKSPPPPYVYSSPPPPYYSPS--------PKVEYKSPPPP 788
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
YS P PP + P V + +PP PY
Sbjct: 789 YVYSSP---PPPPYYSPSPKVEYKSPPPPY 815
>At5g06640.1 68418.m00750 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 689
Score = 32.7 bits (71), Expect = 0.95
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 344 SNCFRRPQNMNHVNFSHYYVNQP-TRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIP 402
S+ + PQ ++ + SH + + +PYV P P + P+ P Y P P +
Sbjct: 51 SSPYSSPQTPHYNSPSHEHKSPKYAPHPKPYVYISPPPPSYYSPS-PKVNYKSPPPPNVY 109
Query: 403 NFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
N P P P Y+ +P + P P P YS P PP + P V++ +PP PY
Sbjct: 110 NSPPP---PYYSPSPKVDYKSPP---P-PYVYSSP----PPPYYSPSPKVDYKSPPPPY 157
Score = 30.7 bits (66), Expect = 3.8
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ + P P+ + P PY Y+ +P + N+ P P
Sbjct: 506 PYVYSSPPPPYHS-PSPKVNYKSPPPPYVYSSHPPPY----YSPSPKV--NYK--SPPPP 556
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
YS P PP + P VN+ +PP PY
Sbjct: 557 YVYSSP----PPPYYSPSPKVNYKSPPPPY 582
Score = 30.3 bits (65), Expect = 5.0
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ + P P+ + P PY P+ A P + P P
Sbjct: 381 PYVYSS-PPPQYYSPSPKVAYKSPPPPYVYSSPPPPYYSPSPKVAYKSPPPPYVYSSPPP 439
Query: 432 MAYS-RPRL--CMPPQGFWPVNFHNPPAPYF 459
YS P++ PP P + +PP PY+
Sbjct: 440 PYYSPSPKVDYKSPPP---PYVYSSPPPPYY 467
>At3g24506.1 68416.m03075 expressed protein
Length = 149
Score = 32.7 bits (71), Expect = 0.95
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 403 NFPVPYVMPNYARAPGIMPNFMPFR--LPFPMAYSRP 437
+FP+ + P R P I P F P + LP PM Y P
Sbjct: 83 DFPIEWERPKPGRRPDIFPKFSPMKSPLPPPMPYDPP 119
>At2g17240.1 68415.m01991 expressed protein
Length = 140
Score = 32.7 bits (71), Expect = 0.95
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 403 NFPVPYVMPNYARAPGIMPNFMPFR--LPFPMAYSRP 437
+FP+ + P R P I P F P + LP PM Y P
Sbjct: 75 DFPIEWERPKPGRRPDIFPKFSPMKTPLPPPMPYDPP 111
>At1g60200.1 68414.m06781 splicing factor PWI domain-containing
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profiles PF01480: PWI domain, PF00076: RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 899
Score = 32.7 bits (71), Expect = 0.95
Identities = 29/80 (36%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 372 PYVAPIFPLPMNFVPNIPL--GMYPRP-APFAIPN--FPVPYVMPNYARAPGIMPNFMPF 426
P P LP N P P GM P A F P+ P P MP Y PG+ P F P
Sbjct: 61 PAQIPSSLLPTNLPPPPPFRPGMQFTPVANFQNPSSGVPPPGSMPQYQPQPGMRP-FQPM 119
Query: 427 RLPFPMAYS-RPRLCMPPQG 445
+P + P MPP G
Sbjct: 120 ANGYPGIHGVAPPGAMPPHG 139
>At2g10940.2 68415.m01168 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 32.3 bits (70), Expect = 1.2
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 363 VNQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRP----APFAIPNFPVPYV-MPNYARAP 417
V P + P P P+P VP +P+ P P +P PVP V +P P
Sbjct: 51 VTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTIPKLPVPPVTVPKLPVPPVTVPKLPVPP 110
Query: 418 GIMPNFMPFRLPFPMAYSRPRLCMPP 443
+P +LP P + P+L +PP
Sbjct: 111 VTVP-----KLPVP-PVTVPKLPVPP 130
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 366 PTRSLRPYVAPIFPLPMNFVPNIPLGMYPRP----APFAIPNFPVPYV-MPNYARAPGIM 420
P + P P P+P VP +P+ P P IP PVP V +P P +
Sbjct: 44 PKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTIPKLPVPPVTVPKLPVPPVTV 103
Query: 421 PNFMPFRLPFPMAYSRPRLCMPP 443
P +LP P + P+L +PP
Sbjct: 104 P-----KLPVP-PVTVPKLPVPP 120
>At2g10940.1 68415.m01167 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
proline-rich cell wall protein [Medicago sativa]
GI:3818416; contains Pfam profile PF00234 Protease
inhibitor/seed storage/LTP family
Length = 291
Score = 32.3 bits (70), Expect = 1.2
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 363 VNQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRP----APFAIPNFPVPYV-MPNYARAP 417
V P + P P P+P VP +P+ P P +P PVP V +P P
Sbjct: 51 VTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTIPKLPVPPVTVPKLPVPPVTVPKLPVPP 110
Query: 418 GIMPNFMPFRLPFPMAYSRPRLCMPP 443
+P +LP P + P+L +PP
Sbjct: 111 VTVP-----KLPVP-PVTVPKLPVPP 130
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 11/83 (13%)
Query: 366 PTRSLRPYVAPIFPLPMNFVPNIPLGMYPRP----APFAIPNFPVPYV-MPNYARAPGIM 420
P + P P P+P VP +P+ P P IP PVP V +P P +
Sbjct: 44 PKLPVPPVTVPKLPVPPVTVPKLPVPPVTVPKLPVPPVTIPKLPVPPVTVPKLPVPPVTV 103
Query: 421 PNFMPFRLPFPMAYSRPRLCMPP 443
P +LP P + P+L +PP
Sbjct: 104 P-----KLPVP-PVTVPKLPVPP 120
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 362 YVNQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMP 421
+++ R+L+ P+ PL + + L P PAP+ + P P P+Y+ P P
Sbjct: 671 HLHHNPRNLQFTALPLLPLYLTCRHRLNLASPPPPAPYYYSS-PQPPPPPHYSLPPP-TP 728
Query: 422 NFMPFRLPFPMAYSRPRLCMPPQGFWPVNFHNPPAP 457
+ P P P PPQ P ++PP P
Sbjct: 729 TYHYISPPPP---PTPIHSPPPQSHPPCIEYSPPPP 761
Score = 31.5 bits (68), Expect = 2.2
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 366 PTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMP 425
PT S P PI P N P IP + P+P + P+ P+P V+P+ G P+ P
Sbjct: 562 PTPSTPP--TPISP-GQNSPPIIPSPPFTGPSPPSSPSPPLPPVIPS-PPIVGPTPSSPP 617
Query: 426 FRLPFPMAYSRPRLCMPPQ 444
P P P + PQ
Sbjct: 618 PSTPTPGTLLHPHHLLLPQ 636
>At1g01440.1 68414.m00059 extra-large G-protein-related weak
similarity to extra-large G-protein (AtXLG1)
(GI:3201682) [Arabidopsis thaliana]
Length = 664
Score = 31.9 bits (69), Expect = 1.7
Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
Query: 363 VNQPTRSLRPYVAPIFPLPMNFVPN-IPLGMYPR-------PAPFAIPNFPVPYVMPNYA 414
V+QP + P P N P P GMYP PA FPV + N+
Sbjct: 110 VDQPPMGFHAHHGPP-PSYYNPYPEPFPYGMYPTASNQPHVPAYRDPYGFPVHRIPQNFY 168
Query: 415 RAPGIMPNFMPFRLPFP 431
+ P PN MP R P+P
Sbjct: 169 QGPSHYPNQMPPRPPYP 185
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 31.5 bits (68), Expect = 2.2
Identities = 23/88 (26%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAPF-AIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
Y PI+P P+ P +YP P P + P P + P P + P P P
Sbjct: 63 YSPPIYPPPIQKPPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPP--TPTYSPPIYPPP 120
Query: 432 MAYSRPRLCMPPQGFWPVNFHNPPAPYF 459
+ PP +P PP P +
Sbjct: 121 IQKPPTPTYSPP--IYPPPIQKPPTPSY 146
Score = 30.3 bits (65), Expect = 5.0
Identities = 21/87 (24%), Positives = 29/87 (33%), Gaps = 2/87 (2%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPM 432
Y PI+P P+ P +P P +P P P P P P + P
Sbjct: 129 YSPPIYPPPIQKPPTPSYSPPVKPPPVQMP--PTPTYSPPIKPPPVHKPPTPTYSPPIKP 186
Query: 433 AYSRPRLCMPPQGFWPVNFHNPPAPYF 459
+P + P H PP P +
Sbjct: 187 PVHKPPTPIYSPPIKPPPVHKPPTPIY 213
Score = 29.5 bits (63), Expect = 8.8
Identities = 24/88 (27%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Query: 373 YVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPV--PYVMPNYARAPGIMPNFMPFRLPF 430
Y P+ P P+ P +P P +P P P V P + P P + P
Sbjct: 668 YSPPVKPPPVQLPPTPTYSPPVKPPPVQVPPTPTYSPPVKPPPVQVPPTPTYSPPIKPPP 727
Query: 431 PMAYSRPRLCMPPQGFWPVNFHNPPAPY 458
P PPQG + PP PY
Sbjct: 728 VQVPPTPTTPSPPQG----GYGTPP-PY 750
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 31.5 bits (68), Expect = 2.2
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
P +P P P++ P P+ P P P P P P P P + P P P
Sbjct: 497 PVHSPPPPSPIHSPPPPPVYSPPPPPPVYSPPPPPPVYSP--PPPPPVHSPPPPVHSPPP 554
Query: 432 MAYSRPRLCMPPQGFWPVNFHNPPAP 457
+S P PP P H+PP P
Sbjct: 555 PVHSPP----PPVHSPPPPVHSPPPP 576
>At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 253
Score = 31.5 bits (68), Expect = 2.2
Identities = 44/171 (25%), Positives = 68/171 (39%), Gaps = 14/171 (8%)
Query: 258 CRFCDLEFDGKDAM-GHVNEAAEHNATLTVNFFLG-EYRNNLIR---LIRGDFHCAICNV 312
CRFC L+F A+ GH+N + T T+N YRN+ I + +H
Sbjct: 53 CRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVYRNDTITPPGISPFGYHHTTDPT 112
Query: 313 FMKSNDLSDHVESLSHMLLLTKSMEKCNPGISNCFRRPQNMNHVNFSHYYVNQPTRSLRP 372
+S S + S L P + Q H +F+ YY+N R R
Sbjct: 113 IYRSVYSSPMIYPGSSSTNLVPQPPMPPPPPPYPYSSNQYSPHNHFNDYYLNPSFRGSRS 172
Query: 373 YVAPIFPLP----MNFVPNIPL--GMYPRPAPFAIPNFPVPYVMPNYARAP 417
++P LP ++++ + P+ G AP FP+ P+ RAP
Sbjct: 173 -ISPSPNLPTTTTVDYMADSPVEPGYTCVGAPIGPTGFPIR--GPSIVRAP 220
>At4g08410.1 68417.m01390 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965;
Length = 707
Score = 31.1 bits (67), Expect = 2.9
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 16/90 (17%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV FP P + P+ + P P+ + P PY Y+ +P + N+ P P
Sbjct: 504 PYVYS-FPPPPYYSPSPKVDYKSPPPPYVYSSPPPPY----YSPSPKV--NYK--SPPPP 554
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
YS P PP + P V + +PP PY
Sbjct: 555 YVYSSP----PPPYYSPSPKVEYKSPPPPY 580
Score = 30.7 bits (66), Expect = 3.8
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ + P P P+ + P PY P+ P + P P
Sbjct: 454 PYVYSS-PPPPYYSPSPKVDYKPPPPPYVYSSPPPPYYSPSPKVDYKSPPPPYVYSFPPP 512
Query: 432 MAYS-RPRL--CMPPQGFWPVNFHNPPAPYF 459
YS P++ PP P + +PP PY+
Sbjct: 513 PYYSPSPKVDYKSPPP---PYVYSSPPPPYY 540
Score = 29.9 bits (64), Expect = 6.7
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PY+ P P + P+ + P P+ + P PY P+ P P P
Sbjct: 579 PYIYSS-PPPPYYAPSPKVDYKSPPPPYVYSSPPPPYYSPS--------PKVDYKSPPPP 629
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
YS P PP + P VN+ +PP PY
Sbjct: 630 YVYSSP----PPPYYSPSPKVNYKSPPPPY 655
Score = 29.5 bits (63), Expect = 8.8
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ + P P+ + P PY P+ P P P
Sbjct: 254 PYVYSS-PPPPYYSPSPKVNYKSPPPPYVYGSPPPPYYSPS--------PKVDYKSPPPP 304
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
YS P PP + P VN+ +PP PY
Sbjct: 305 YVYSSP----PPPYYSPSPKVNYKSPPPPY 330
Score = 29.5 bits (63), Expect = 8.8
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ + P P+ + P+PY P+ P + P P
Sbjct: 404 PYVYSS-PPPPYYSPSPKVDYKSPPPPYIYSSTPLPYYSPSPKVDYKSPPPPYVYSSPPP 462
Query: 432 MAYS-RPRLCMPPQGFWPVNFHNPPAPYF 459
YS P++ P P + +PP PY+
Sbjct: 463 PYYSPSPKVDYKPPP-PPYVYSSPPPPYY 490
>At2g24450.1 68415.m02922 fasciclin-like arabinogalactan family
protein similar to fasciclin-like
arabinogalactan-protein 1 [Arabidopsis thaliana]
gi|13377776|gb|AAK20857
Length = 280
Score = 31.1 bits (67), Expect = 2.9
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 343 ISNCFRRPQNMNHVNFSHYYVNQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAP--FA 400
I+ FR P N++ V S P VAP P+ P P+ P P+P A
Sbjct: 150 ITTVFRNPYNLSVVQIS-----------MPIVAPGLGSPVKVPPPPPMSSPPAPSPKKGA 198
Query: 401 IPNFPVPYVMPNYARA-PGIMPNFMPFRLP 429
P P +YA A PG+ P P P
Sbjct: 199 ATPAPAPADEGDYADAPPGLAPETAPASAP 228
>At1g70985.1 68414.m08189 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 135
Score = 31.1 bits (67), Expect = 2.9
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 381 PMNFVPNIPLGMYPRPAPFAIPNFP-VPYVMPNYARAPGIMPNFMPFRLPFPMAYSRP 437
P + P P G YP P+ +PN+P PY N + P P FP Y +P
Sbjct: 47 PAGYYPQ-PTGYYPPPSSSNVPNYPSPPYYGGNPSGGYNGPPPPDPILPYFPFYYRKP 103
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 30.7 bits (66), Expect = 3.8
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 394 PRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQGFWPVNFHN 453
P P P+ P +P P Y+R P + P P Y P PP +P ++
Sbjct: 42 PPPPPYRSP-VTIPPPPPVYSRPVAFPPPPPIYSPPPPPIYPPPIYSPPPPPIYPPPIYS 100
Query: 454 PP 455
PP
Sbjct: 101 PP 102
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 30.7 bits (66), Expect = 3.8
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 379 PLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPN---YARAPGIMPNFM 424
P+PM P +P+ P+P +P+ P P MP+ + +PG MP M
Sbjct: 85 PMPMASPPMMPMTPSTSPSPLTVPDMPSP-PMPSGMESSPSPGPMPPAM 132
Score = 29.5 bits (63), Expect = 8.8
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 392 MYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMP--PQGFWPV 449
M P P P P P+P P AP MP P +P + S L +P P P
Sbjct: 60 MTPPPMPMTPP--PMPMTPPPMPMAPPPMPMASPPMMPMTPSTSPSPLTVPDMPSPPMPS 117
Query: 450 NFHNPPAP 457
+ P+P
Sbjct: 118 GMESSPSP 125
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 30.7 bits (66), Expect = 3.8
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
P P P P +V P P P P+ P P PYV P P + P P P P
Sbjct: 396 PPPPPPPPPPPPYVYPSPPPPPPSPPPYVYPPPPPPYVYPPPPSPPYVYP--PPPPSPQP 453
Query: 432 MAYSRP 437
Y P
Sbjct: 454 YMYPSP 459
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 30.7 bits (66), Expect = 3.8
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 16/91 (17%)
Query: 371 RPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPF 430
+PYV P P + P+ + P P+ + P PY P+ P P
Sbjct: 50 KPYVKSS-PPPQYYTPSPKVNYKSPPPPYVYSSPPPPYYSPS--------PKVDYKSPPP 100
Query: 431 PMAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
P YS P PP + P V++ +PP PY
Sbjct: 101 PYVYSSP----PPPYYSPSPKVDYKSPPPPY 127
>At4g08400.1 68417.m01388 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 513
Score = 30.3 bits (65), Expect = 5.0
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 16/91 (17%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P + P P+ + P PY P+ P P P
Sbjct: 186 PYVYSS-PPPPYYSPTPKVDYKSPPPPYVYSSPPPPYYSPS--------PKVDYKSPPPP 236
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPYF 459
YS P PP + P VN+ +PP PY+
Sbjct: 237 YVYSSP----PPPYYSPSPKVNYKSPPPPYY 263
>At3g19860.1 68416.m02515 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 284
Score = 30.3 bits (65), Expect = 5.0
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 11/100 (11%)
Query: 389 PLGMYPRPAPFAIP--NFPVPYVMPNYARAPGIMPNFMPFRLPFPMAYSRPRLCMPPQGF 446
P +P P P A+P + P+ MP+Y P+ +P P M Y MPP
Sbjct: 123 PPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPY------MPPNTV 176
Query: 447 WPVNFHNPPAPYFPVNRAKDTNGHARSKEGEADTGDSHSE 486
V + P P NR+++ S+E ++ + +E
Sbjct: 177 --VEQQSVHIPQNPGNRSREPRAKV-SRESRSEKAEDSNE 213
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 30.3 bits (65), Expect = 5.0
Identities = 30/94 (31%), Positives = 39/94 (41%), Gaps = 14/94 (14%)
Query: 366 PTRSLRPYVAPIFPLPMNFVPNIP-LGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFM 424
P+ + P V P P + P + YP P P + P+ P PYV Y+ P P
Sbjct: 428 PSSKMSPSVRAYSPPPPPYSKMSPSVRAYPPPPPPS-PSPPPPYV---YSSPP--PPYVY 481
Query: 425 PFRLPFPMAYSRPRLCMPPQGFWPVNFHNPPAPY 458
P P YS P PP P + +PP PY
Sbjct: 482 SSPPPPPYVYSSP----PPP---PYVYSSPPPPY 508
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.9 bits (64), Expect = 6.7
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 364 NQPTRSLRPYVAPIFP-LPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIM-- 420
+ P + PY++P P P++ P P+ P P P P P P + + P ++
Sbjct: 579 HSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCIEPPPPPPCIEYSPPPPPPVVHY 638
Query: 421 ------PNFMPFRLPFPMAYSRPRLCMPPQGFWPVNFHNPPAP 457
P + P P+ YS P PP PV++ +PP P
Sbjct: 639 SSPPPPPVYYSSPPPPPVYYSSP---PPPP---PVHYSSPPPP 675
>At4g01290.1 68417.m00170 expressed protein
Length = 991
Score = 29.9 bits (64), Expect = 6.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 405 PVPYVMPNYA-RAPGIMPNFMPFRLPFPMAYSRPRLCMPPQG 445
P P+ P+ + PG++P P + FP A+ +P MPP G
Sbjct: 897 PQPHHSPHVNNQMPGLIPELNPSQ-GFPFAHRQPNYGMPPPG 937
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 29.9 bits (64), Expect = 6.7
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 365 QPTRSLRPYVAPIF-PLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNF 423
+PT Y P++ P P+ P IP +Y P P+ PV P+Y+ P P +
Sbjct: 111 KPTIPPPVYTPPVYKPTPVYTKPTIPPPVYTPPVYKPTPSPPVYKKSPSYSSPP---PPY 167
Query: 424 MP 425
+P
Sbjct: 168 VP 169
>At3g02670.1 68416.m00258 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 217
Score = 29.9 bits (64), Expect = 6.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 376 PIFPLPMNFVPNIPLGMYPRPAPFAIPNFP 405
P PLP +P +PL P P P IP+FP
Sbjct: 174 PFPPLPPVTIPGLPLPFPPLP-PVTIPSFP 202
>At5g49080.1 68418.m06074 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 609
Score = 29.5 bits (63), Expect = 8.8
Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 10/118 (8%)
Query: 347 FRRPQNMNHVNFSHYYVNQP--TRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNF 404
+ PQ + NF + P T +PY+ P P + P+ + P P+ +
Sbjct: 25 YSSPQTPQY-NFPSHQHKSPKYTPHSKPYIYNS-PPPPYYSPSPKVNYKSPPPPYVYSSP 82
Query: 405 PVPYVMPNYARAPGIMPNFMPFRLPFPMAYS-RPRL--CMPPQGFWPVNFHNPPAPYF 459
P PY P+ P + P P YS P++ PP P + +PP PY+
Sbjct: 83 PPPYYTPSPKVDYKSPPPPYEYSSPPPPYYSPSPKIDYKSPPP---PYVYSSPPLPYY 137
>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 328
Score = 29.5 bits (63), Expect = 8.8
Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMP----FR 427
PYV P P + P Y P P + N P P P Y+ +P + F P +
Sbjct: 151 PYVYNSPPPP--YYSLSPKVDYKSPPPPYVYNSPPP---PYYSPSPKVDYKFSPPPYVYN 205
Query: 428 LPFPMAYS-RPRLCM--PPQGFWPVNFHNPPAPYF 459
P P YS P++ PP P +++PP PYF
Sbjct: 206 SPSPPYYSPSPKVDYKSPPP---PYVYNSPPPPYF 237
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 29.5 bits (63), Expect = 8.8
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 361 YYVNQPTRSLRPYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPN---YARAP 417
YY + P PYV P P+ + P+ + P P+ + P PY P+ Y ++P
Sbjct: 125 YYKSPPP----PYVYSS-PPPLYYSPSPKVYYKSPPPPYVYSSPPPPYYSPSPKVYYKSP 179
Query: 418 GIMPNFMPFRLPFPMAYSRPRLC--MPPQGFWPVNFHNPPAPYF 459
P ++ P P P++ PP P + +PP PY+
Sbjct: 180 --PPPYVYSSPPPPYYSPSPKVYYKSPPP---PYVYSSPPPPYY 218
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 29.5 bits (63), Expect = 8.8
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P+ + P+ + P P+ + P PY P+ P+ + P P
Sbjct: 116 PYVYSSPPPPI-YSPSPKVDYKSPPPPYVYSSPPPPYYSPSPKVEYKSPPSPYVYNSPPP 174
Query: 432 MAYS-RPRL--CMPPQGFWPVNFHNPPAPYF 459
YS P++ PP P + +PP PY+
Sbjct: 175 SYYSPSPKVDYKSPPP---PYVYSSPPPPYY 202
Score = 29.5 bits (63), Expect = 8.8
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 16/90 (17%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ + P P+ + P PY P+ P + P P
Sbjct: 216 PYVYSS-PPPPYYSPSPKVDYKSPPPPYVYSSPPPPYYSPS--------PKIVYKSPPPP 266
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPY 458
YS P PP + P V++ +PP PY
Sbjct: 267 YVYSSP----PPPYYSPSPKVDYKSPPPPY 292
Score = 29.5 bits (63), Expect = 8.8
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 16/91 (17%)
Query: 372 PYVAPIFPLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFMPFRLPFP 431
PYV P P + P+ + P P+ + P PY Y+ AP + P P P
Sbjct: 908 PYVYSS-PPPPYYSPSPKVDYKSPPPPYVYSSPPPPY----YSPAPKVDYKSPP---P-P 958
Query: 432 MAYSRPRLCMPPQGFWP---VNFHNPPAPYF 459
YS P PP + P V++ +PP PY+
Sbjct: 959 YVYSSP----PPPYYSPSPKVDYKSPPPPYY 985
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 29.5 bits (63), Expect = 8.8
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 7/82 (8%)
Query: 379 PLPMNFVPNIPLGMYPRPAPFAIPNFPVPYVMPNYARAPGIMPNFM---PFRLPFPMAYS 435
P P+ P P+ P PAP P P + P +P P P P P +S
Sbjct: 728 PPPVQSPPPPPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHS 787
Query: 436 RPRLCMPPQGFWPVNFHNPPAP 457
P PP P H+PP P
Sbjct: 788 PP----PPVHSPPPPVHSPPPP 805
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 29.5 bits (63), Expect = 8.8
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Query: 323 VESLSHMLLLTKSMEKCNPG-----ISNCFRRPQNMNHVNFSHYYVNQPTRSLRPYVAPI 377
+++L H LL K M + N S+ +P ++ YV+ P S+ P
Sbjct: 2 IKALKHTSLLQKMMTQLNLAQPLDYSSSSNTQPYGVSTTLTLPPYVSLPPLSVPGNAPPF 61
Query: 378 FPLPMNFVPNIPL-GMYPRPAPFAIPNFPVPYVMPN 412
P N P+ G+ P P P +PN P PN
Sbjct: 62 CINPPNTPPSSSYPGLSPPPGPITLPNPPDSSSNPN 97
>At1g55390.1 68414.m06335 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 684
Score = 29.5 bits (63), Expect = 8.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 6/42 (14%)
Query: 466 DTNGHARSKEGEADTGDSHSEDEDDCYDKDQRIWYQDIYYRL 507
D +G ++G++D GD D+DD D D + QDIYYR+
Sbjct: 143 DGDGVGEDRDGDSD-GDGDGGDDDD--DDD---FQQDIYYRV 178
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.137 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,910,878
Number of Sequences: 28952
Number of extensions: 790706
Number of successful extensions: 2114
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 1970
Number of HSP's gapped (non-prelim): 167
length of query: 771
length of database: 12,070,560
effective HSP length: 87
effective length of query: 684
effective length of database: 9,551,736
effective search space: 6533387424
effective search space used: 6533387424
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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