GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001652-TA|BGIBMGA001652-PA|undefined
         (349 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    25   0.82 
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    25   0.82 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   3.3  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   3.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   4.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   4.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   5.8  

>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 255 TEAVATRFIANALTETKKSKVASGPATDGAVLKTRGTMIPTREVYQMSTPNYLA 308
           T  V    +   L +TKK     G  TDG ++K   +  P R++  ++ P Y A
Sbjct: 224 TMLVPWALMEQPLAQTKKLATIVGCGTDGTMIKCLKSR-PARQI-ALTVPRYQA 275


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 255 TEAVATRFIANALTETKKSKVASGPATDGAVLKTRGTMIPTREVYQMSTPNYLA 308
           T  V    +   L +TKK     G  TDG ++K   +  P R++  ++ P Y A
Sbjct: 224 TMLVPWALMEQPLAQTKKLATIVGCGTDGTMIKCLKSR-PARQI-ALTVPRYQA 275


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 188 SPSFEEPKENIGDNSQYETFEAVHLISKNDSY--EEYVTPKKDYYEYGEAKTDSSENYKK 245
           SP   E K+N+ D  + +  +      +   +     +  K DY++  EAK D    YKK
Sbjct: 59  SPDGLELKKNMPDAIETDCSKCSEKQKEGSDFIMRYLIDNKPDYWKALEAKYDPDGTYKK 118


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 15/63 (23%), Positives = 27/63 (42%)

Query: 160 KIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKENIGDNSQYETFEAVHLISKNDSY 219
           K   ++ K  Y H +     EQ++ K  S    +   NI D   +   +AV  ++  +S 
Sbjct: 45  KADPEMPKRMYIHPDSPSTGEQWMQKVVSFHKLKLTNNISDKHGFLKEKAVDFLTILNSM 104

Query: 220 EEY 222
            +Y
Sbjct: 105 HKY 107


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 97  RKVKERIQNDLAVTASSDVKKIKTSQETS-DYSHA 130
           R+  +  +ND  VT+ SD      S +TS D  H+
Sbjct: 45  REPMDEDKNDSGVTSGSDFHSSSPSSDTSQDLQHS 79


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 154 QKHDISKIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKENIGDNSQYETFEAVH 211
           Q  +++ +K K      A  + K   +    ++YSP+F + +      SQY ++   H
Sbjct: 185 QNEEVTALKIKYNPFAKAFLDAKERPDSIYQREYSPTFTQQQTQY---SQYGSWFLPH 239


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 12/52 (23%), Positives = 21/52 (40%)

Query: 160 KIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKENIGDNSQYETFEAVH 211
           K   ++ K  Y H +     EQ++ K  S    +   NI D   +    ++H
Sbjct: 45  KADPEMPKRMYIHPDSPSTGEQWMQKVVSFHKLKLTNNISDKHGFTILNSMH 96


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.129    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,597
Number of Sequences: 317
Number of extensions: 3098
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 7
length of query: 349
length of database: 114,650
effective HSP length: 57
effective length of query: 292
effective length of database: 96,581
effective search space: 28201652
effective search space used: 28201652
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)