Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001652-TA|BGIBMGA001652-PA|undefined
(349 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces pomb... 40 5e-04
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 34 0.035
SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein homolog|Schizos... 32 0.14
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 31 0.24
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 29 0.98
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 29 0.98
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 29 1.3
SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 1.3
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.7
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 28 1.7
SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces ... 28 1.7
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 28 1.7
SPAC13F5.03c |||glycerol dehydrogenase |Schizosaccharomyces pomb... 28 2.3
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 27 3.0
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 27 3.0
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 27 4.0
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 4.0
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 27 4.0
SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 5.2
SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces ... 27 5.2
SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce... 27 5.2
SPAC17A5.09c |||protein phosphatase regulatory subunit Glc9|Schi... 27 5.2
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 5.2
SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr... 27 5.2
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 26 6.9
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 26 6.9
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 26 9.2
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 26 9.2
>SPAP8A3.05 |||ski complex subunit Ski7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 695
Score = 39.9 bits (89), Expect = 5e-04
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 97 RKVKERIQNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHKKTPKRIRTNSIMQQKH 156
+K K++ ++ + SS +K+ S +SD + T DH++ TN ++ +K
Sbjct: 11 KKAKQKPPSEHPIGLSSILKQ--DSSSSSDSPNFFPSSSTNDHQERDTINDTNFVVPEKQ 68
Query: 157 DISKIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEP-----KENIGDNSQYETFEAVH 211
SK+ + K HS+ Q+Q PK +EP K+N+ ++ + F V
Sbjct: 69 KTSKLALLAAERKKLHSSFPSTQQQ-PPKTEKEKEKEPIQAKHKKNVENDFLLQRFRKVR 127
Query: 212 LISKND-----SYEEYVTPKKDYYEYGEAKTDSSENYKKP 246
+ K D S+E ++T D + +S + K P
Sbjct: 128 IAEKKDSEQPSSHEIHLTDDDDKTTLQKQMVESDQLKKNP 167
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 33.9 bits (74), Expect = 0.035
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 10/154 (6%)
Query: 89 KIDFEELVRKVKERIQNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHKKTPKRIRT 148
K D + + VKE A+ S KKI ++E + + K KK+ K +
Sbjct: 3 KKDKTSVKKSVKETASKKGAIEKPSKSKKI--TKEAAKEIAKQSSKTDVSPKKSKKEAKR 60
Query: 149 NSIMQQKHDISKIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKENIGDNSQYETFE 208
S + K KQK +K+K S++ ++ + S S E + ++S E+
Sbjct: 61 ASSPEPSKKSVK-KQKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSES-- 117
Query: 209 AVHLISKNDSYEEYVTPKKDYYEYGEAKTDSSEN 242
S ++S EE + ++ E + SSE+
Sbjct: 118 -----SSSESEEEVIVKTEEKKESSSESSSSSES 146
>SPBC19C7.01 ||SPBC32F12.13c|Mago binding protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 196
Score = 31.9 bits (69), Expect = 0.14
Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 4/143 (2%)
Query: 91 DFEELVRKVKE-RIQNDLAVTASSDVKKI-KTSQETSDYSHAKKPKLTYDHKKTPKRIRT 148
+F L +++K+ ++ ND + + S D I + +E + + K K DHK +
Sbjct: 54 NFASLEKQMKKLQLSNDASTSKSIDRPPISELEKEKLERPLSNKKKEKNDHKAESLKHDY 113
Query: 149 NSIMQQKHDISKIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKENIGDNSQYETFE 208
+S+ +++ ISK K + Y+ + K++ + PK +P + + + S+ +
Sbjct: 114 DSVGEKR--ISKDSVKHLDKTYSSIDSKKDFKYNFPKTQAPEWRRGAKPLSKTSEPSVYS 171
Query: 209 AVHLISKNDSYEEYVTPKKDYYE 231
+N V K Y E
Sbjct: 172 EKMSKRENKKSINTVDKKTGYKE 194
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 31.1 bits (67), Expect = 0.24
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 9/122 (7%)
Query: 99 VKERIQNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHKKTPKRIRTNSIMQQKHDI 158
V + I L + + + + + + S + A P L + K+ P IR + +QK D
Sbjct: 600 VNQNIPFSLTLPCTQGHVESELNVKQSTVTEAANPSLNGEKKQEPIVIRDLGLNKQKRDS 659
Query: 159 SKIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPK--ENIGDNSQYETFEAVHLISKN 216
SK+ K + ++ ++RN E P + S S + + + NS T EA H+ N
Sbjct: 660 SKLNHK----EPSNPIEERN-EDIEPSEASTSVSKKRKQKKKKKNSGKLTIEAEHV--SN 712
Query: 217 DS 218
DS
Sbjct: 713 DS 714
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 29.1 bits (62), Expect = 0.98
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 97 RKVKER-IQNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHKKTPKRIRTNSIMQQK 155
RKV +R +Q+D A + + + + S+ + A +PK+T D TP R N M K
Sbjct: 117 RKVAQRRVQSDKAEANDAAMSSSAPTVDVSEGNSAAEPKITPDDSDTP---RLNVDMNDK 173
Query: 156 HDISKIKQK 164
++ + K
Sbjct: 174 INVDEAAAK 182
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 29.1 bits (62), Expect = 0.98
Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 25/252 (9%)
Query: 111 ASSDVKKIKTSQETSDYSHAKKPK---LTYDHKKTPKR-IRTNSIMQQ---KHDISKIKQ 163
ASS +K IK S + ++ + +P+ + D KKT K+ + I ++ + DI +
Sbjct: 15 ASSKLKNIKKSSKRNNSQSSTEPRKNATSLDSKKTTKKGVALPEIAERELTQEDIEFFNE 74
Query: 164 KITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKENIGDNSQYETFEAVHLISKNDSYEEYV 223
+ KY S + + + K P + K+ + Q+E + L S +S +Y
Sbjct: 75 NPSSLKYLSSINPEDLGKKVEKGPRPDIYDLKK----SQQFE-LDTSRLSSDEESVLDYS 129
Query: 224 TPKKDYYEYG-EAKTDSS---ENYKK-PVNDDRNIVTEAVATRFIANALTETKKSKVASG 278
+D +Y + SS E+Y + P+ ++ VA + N +S+ +
Sbjct: 130 KDSEDEQDYELRPRVSSSWNNESYNRLPIKTKDGLLQNVVAD--VNNGEEFLSESESEAS 187
Query: 279 PATDGAVLKTRGTMIPTREV-----YQMSTPNYLAKLPIVAERYDFDEPLPEKDRLPDDF 333
D + + + +++ + N L I A++ +EP+ + + F
Sbjct: 188 LEIDSDIKDEKQKSLEEQKIAPEIPVKQQIKNDKEALGIQAQQL-LEEPVENLHLIRNIF 246
Query: 334 EPIESPPARINK 345
E +SP I K
Sbjct: 247 EKFDSPYITIKK 258
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 28.7 bits (61), Expect = 1.3
Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 180 EQYIPKQYSPSFEEPKENIGDNSQYETFEAVHLISK--NDSYEEYVTPKKDYYEYGEAKT 237
E +P E P G +++ EAV ++ +D +E T K ++ +A
Sbjct: 420 EVNVPSTIPTESENPVAVGGTTAEHPVQEAVTAPTETAHDFSKETTTASKRVSKHDKASA 479
Query: 238 DSSENYKKPVNDDRNIVTEAVATRFIANALTETKKSKVASGPATDG 283
+ + +KP + + T + + ++ + SK AS P++ G
Sbjct: 480 EKHKVARKPSSTGQEPTTPSTPAKSAQSSKHARRPSKQASAPSSPG 525
>SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 253
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 304 PNYLAKLPIVAERYDFDEPLPEKDRLPDDFEPIESPPARINKK 346
P+YL + IV+ + P K++ P I SPP ++ K+
Sbjct: 97 PDYLEEDEIVSYTFSKTGPTTSKNKHPSHSNTIRSPPYKVKKE 139
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 160 KIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKEN----IGDNSQY 204
+I+Q++ + +A++ RN+ P YS + ++ KEN DNS Y
Sbjct: 2356 QIEQELATKLFAYAFPNRNESDGFPHIYSRNHDKRKENGSQGEADNSNY 2404
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 28.3 bits (60), Expect = 1.7
Identities = 20/91 (21%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 91 DFEELVRKVKERIQNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHKKTPKRIRTNS 150
+F E ++K +E +SSD K + ++ S +KK K + PK++ +
Sbjct: 138 EFSEWMQKAEEDEDRVCEDASSSDEAKREKRKKHSSKKKSKK-KTSTGSALDPKKLEKIT 196
Query: 151 IMQQKHDISKIKQKITKEKYAHSNQKRNQEQ 181
++K K K+ +K++ + S+ K +++
Sbjct: 197 KKKKKEHKKKDKESSSKKRKSGSSDKEEKKK 227
>SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 362
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 94 ELVRKVKERIQNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHK 140
E +R++ E + A K + +E+ YS KKP +T HK
Sbjct: 150 EAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHK 196
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 28.3 bits (60), Expect = 1.7
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Query: 88 LKIDFEELVRKVKERIQNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHKKTPKRIR 147
L + ELV + +++ +LA KK +TS +++ KK T TP
Sbjct: 574 LNVKNTELV-SLNNQLERELAYLREQQHKK-RTSSSFGIFNNDKKSNRTIS---TPSPRE 628
Query: 148 TNSIMQQKHDISKIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKEN 197
+ S +Q + K K+K + KRN + + K +S F +++
Sbjct: 629 SFSRLQMVASSLGFRPKDNKDKESGGYNKRNSKIDLKKSFSKRFHWKRDS 678
>SPAC13F5.03c |||glycerol dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 450
Score = 27.9 bits (59), Expect = 2.3
Identities = 10/28 (35%), Positives = 20/28 (71%)
Query: 34 EDFHSIAKQFVPAKLADQLKDIASKTDK 61
E H+++K+F P+++AD +K + S + K
Sbjct: 396 ESIHNMSKKFNPSQIADAIKAVDSYSQK 423
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 188 SPSFEEPKENIGDNSQYETFEAVHLISKNDSYEEYVTPKKDYYEYGEAKTDSSEN 242
+PS +E +++ + S+YE +A + + EEY + Y E++ + E+
Sbjct: 934 APSDDEGDDSVEEVSEYEASDADPSDEEEEESEEYSEDASEEDGYSESEVEDEES 988
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 189 PSFEEPKENIGDNSQYETFEAVHLISKNDSY 219
PS ++ + DNS TF ++ + KND+Y
Sbjct: 2570 PSILSQEDTMNDNSLLPTFHSMVAVVKNDTY 2600
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 27.1 bits (57), Expect = 4.0
Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 142 TPKRIRTNSIMQQKHDISKIKQKIT-KEKYAHSNQKRNQEQYIPKQYSPSFEEPKENIGD 200
T ++R + ++ K K Q + K KY+ + ++++E+ ++ S ++ D
Sbjct: 130 TQAKLRLDPLLAIKQQEQKQLQTLMEKRKYSLDSDRKSKERRHRDRHHRSNQDRSRERSD 189
Query: 201 NSQYETFEAVH--LISKNDSYEEYVTPKKDYYEYGEAKTDSSENYKKPVNDD 250
N Q+ + + H +ND D Y + + K DS +KK +DD
Sbjct: 190 NEQHSSDKREHSRRSYRNDRNNWRERTHNDRYRHRD-KYDSG-YFKKHYDDD 239
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 4.0
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 97 RKVKERIQNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHKKTPKRIRTNSIMQQKH 156
R+ ++ + D V + KK + ETSD +K + + T I Q+ H
Sbjct: 49 RQKQKNTKKDTLVNRETPSKKSQ-KLETSDALKSKSKDSSKKEPVVVPKKGTPKIFQENH 107
Query: 157 DISKIKQKITKEKYAHSNQKRNQE 180
+ K+K KEK N ++
Sbjct: 108 KVKKVKSP-KKEKLVGKNPAEKED 130
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 27.1 bits (57), Expect = 4.0
Identities = 30/118 (25%), Positives = 44/118 (37%), Gaps = 10/118 (8%)
Query: 125 SDYSHAKKPKLTYDHKKTPKRIRTNSIMQQKHDISKIKQKITKEKYAHSNQKRNQEQYIP 184
++YS K L ++ PK RT S ++K K +K+K + N K Q
Sbjct: 159 TEYSETTKFPLGKSYR--PKASRTTSSQSVASTMTKSSTKTSKKKSSKKNSKSESNQDSS 216
Query: 185 KQYS---PSFEEPKENIGDNSQYETFEAVHLISKNDSYEE----YVT-PKKDYYEYGE 234
S PS E +SQ V + + + YVT P K YG+
Sbjct: 217 NDRSSTAPSTAESNNEHLSSSQKSKHSIVFMAEQTSHHPAVSAFYVTCPSKGIEVYGQ 274
>SPAC9G1.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 418
Score = 26.6 bits (56), Expect = 5.2
Identities = 28/152 (18%), Positives = 63/152 (41%), Gaps = 13/152 (8%)
Query: 104 QNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHKKTPKRIRTNSIMQQKHD------ 157
Q+ L+ +++ + I + D+S+ ++ D+ + + ++Q H
Sbjct: 180 QSPLSNFSTTKISSINVPSDILDFSNLSSNEIPKDYSSSTALLNNTVAVKQDHKLSANTF 239
Query: 158 ISKIKQKITKEKYAHSNQKRNQE-QYIPKQYSPSFEEPKENIGDNSQYETFEAVHLI--- 213
+S + I +E + S N+E + +PK + + + ++S ++ I
Sbjct: 240 LSSPVKLIERESNSCSTISINKEDEVVPKSPLSLDRKKVDEVEEHSSIAKLDSEEKIRET 299
Query: 214 -SKNDSYEEYVTPKKDYYEYGE--AKTDSSEN 242
KN S P D +E+G + D+S+N
Sbjct: 300 KKKNSSTSLSPDPTSDNFEWGSWVSSQDTSKN 331
>SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 26.6 bits (56), Expect = 5.2
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 293 IPTREVYQMS--TPNYLAKLPIVAERYDFDEPLPEKDRLPDDFEPIESPPARIN 344
+P RE ++S T + +P+ +E Y F++P P +++ F+P IN
Sbjct: 135 MPYREKEELSSETDESVIDIPLPSEEYPFEDPKP-REKKNKSFKPKHHKKQDIN 187
>SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 218
Score = 26.6 bits (56), Expect = 5.2
Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 140 KKTPKRIRTNSIMQQKHDISKIKQKITK-EKYAHSNQKRNQEQYIPKQYSPSFEEPKENI 198
KK + T I + D ++ + I K E+ H+ ++ Q + +PS E P+E +
Sbjct: 141 KKNELQSSTEEIDSTEKDFDELHKVILKVERELHTLRQNTPSQNEQAEATPSKEIPRETV 200
Query: 199 GDNSQY 204
+ + +
Sbjct: 201 SEKADH 206
>SPAC17A5.09c |||protein phosphatase regulatory subunit
Glc9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 310
Score = 26.6 bits (56), Expect = 5.2
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 161 IKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKENIGD-NSQYETFEAVHLISKNDS- 218
++ K KY+ N ++++ P++ P E I + + T +V+ + K+
Sbjct: 167 VRMKAPTPKYSTDNHLPSKKELFPRETKPQVEVVHARINNPDDHLRTHPSVNNLGKDSDH 226
Query: 219 ----YEEYVTPKKDYYEYGEAKTDSSENYKKPVND 249
Y E V +D EA +++ EN K D
Sbjct: 227 ADKMYNEGVILGEDEAMEEEALSEAEENIPKKKPD 261
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 5.2
Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 7/135 (5%)
Query: 122 QETSDYSHAKKPKLTYDHKKTPKRIRTNSIMQQKHDISKIKQKITKEKYAHSNQKRNQEQ 181
+E SD K+ K + K + D K + + ++ E+
Sbjct: 415 EEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKTETDVKAKETDSIEANDKDEK 474
Query: 182 YIPKQYSPSFEEPKENIGDNSQYETFEAVHLISKNDSYEEYVTPKKDYYEYGEAKTDSSE 241
K+ EE + D ET +++ + K + + T K +TDS +
Sbjct: 475 TDSKETEDKVEETESKEADVKAKET-DSIEVDDKEEKTDSKETADK------VEQTDSKD 527
Query: 242 NYKKPVNDDRNIVTE 256
+KP DD E
Sbjct: 528 TNEKPAKDDNKEANE 542
>SPAC6C3.07 |mug68||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 515
Score = 26.6 bits (56), Expect = 5.2
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 104 QNDLAVTASSDVKKIKTSQETSDYSH-AKKPKLTYDHKKTPKRIRTNSIMQQKHDISKIK 162
+ND+ + KK + E D S +K +L + + +SI ++++ S
Sbjct: 126 ENDILYHSEISAKKNASPMEFGDASFDLEKQRLHFANSNL------HSIESERNESSLSL 179
Query: 163 QKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKENI 198
EK + + ++ YIP+QY KE I
Sbjct: 180 DSGESEKKSEEDNGNGEQNYIPEQYERLDSPVKEKI 215
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 26.2 bits (55), Expect = 6.9
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 144 KRIRTNSIMQQKHDISKIKQKITKEKYAHSNQKRNQEQYIPKQYSPS---FEEPKENIGD 200
++ R+ MQQ+ + +Q+ +++ Q++ Q+Q ++ +P F P+ N+G
Sbjct: 248 QKFRSLQHMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQAPQNAFFPNPQGNVGA 307
Query: 201 NS 202
S
Sbjct: 308 QS 309
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 26.2 bits (55), Expect = 6.9
Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 101 ERIQNDLAV-TASSDVKKIKTSQETSDYSHAKKPKLTYDHK------KTPKRIRTNSIMQ 153
E + D+ T SSD+ ++++ + + + H KLT + + + ++I N+I
Sbjct: 137 ETVDEDIDTQTMSSDMSEVQSMEISLNCDHEFFEKLTSELQSVEGLQREQRKILFNAIDI 196
Query: 154 QKHDISKIKQKITKEKY 170
H+IS I +K+KY
Sbjct: 197 LSHEISLIASPNSKKKY 213
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 142 TPKRIRTNSIMQQKHDISKIKQKITKEKYAHSNQKRNQEQYIPKQYSP 189
+P S+MQQ +S YAH N EQY + Y P
Sbjct: 405 SPSCYSPESLMQQPLTLSPSSIPSGLPTYAHVNSPLGTEQYPSEAYPP 452
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 25.8 bits (54), Expect = 9.2
Identities = 9/41 (21%), Positives = 23/41 (56%)
Query: 156 HDISKIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKE 196
H+I + + + + H QKR +++ +PK+ + ++ K+
Sbjct: 271 HNIKEFSKCDFTQMFHHFEQKREEKKSMPKEQKKAIKQKKD 311
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.129 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,595,446
Number of Sequences: 5004
Number of extensions: 70563
Number of successful extensions: 262
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 246
Number of HSP's gapped (non-prelim): 31
length of query: 349
length of database: 2,362,478
effective HSP length: 73
effective length of query: 276
effective length of database: 1,997,186
effective search space: 551223336
effective search space used: 551223336
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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