GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001652-TA|BGIBMGA001652-PA|undefined
         (349 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    27   1.0  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    26   1.3  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       25   2.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   7.2  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   7.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   7.2  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.5  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 2/112 (1%)

Query: 87  KLKIDFEELVRKVKERIQNDLAVTASSDVKKIKTSQETSDY-SHAKKPKLTYDHKKTPKR 145
           K KI  E LV++            AS   K  ++  E ++  SH    ++  + + T + 
Sbjct: 815 KSKIKQESLVQQSSRMFLEPPKHHASRGAKPHRSRCEATEARSHLADSQVKKEQQITSQA 874

Query: 146 IRTNSIMQQKHDISKIKQKITKEKYAHSNQKRNQEQYIPKQYSPSFEEPKEN 197
           +  +S M    D      K+  E Y   +Q++ Q+Q   +Q     ++ ++N
Sbjct: 875 LPPHS-MHTDCDYEPESHKLLAENYRQQHQQQQQQQQQQQQQHEHEQQQQQN 925


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 2/132 (1%)

Query: 113 SDVKKIKTS-QETSDYSHAKKPKLTYDHKKTPKRIRTNSIMQQKHDISKIKQKITKEKYA 171
           +D+KK+    QE      A + ++  + KK    +     + Q++D  K K   T  KY 
Sbjct: 341 ADIKKLVDELQEVEVKRAAFENEVAGESKKRGSNVHLERDLVQEYDRLKQKADATSSKYL 400

Query: 172 HSNQKRNQEQYIPKQYSPSFEEPKENIGDNSQYETFEAVHLISKNDSYEEYV-TPKKDYY 230
                 N+EQ   +    S    K  I +N +    E    + + +   +++ T +    
Sbjct: 401 IHLDSVNREQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLE 460

Query: 231 EYGEAKTDSSEN 242
           E    K + S++
Sbjct: 461 EQKRIKAELSQD 472


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 93  EELVRKVKERIQNDLAVTASSDVKKIKTSQETSD-YSHAKKPKLTYDHKK 141
           EEL +K K    N++A  A  D  K+K + ++ D   H +  K++   KK
Sbjct: 184 EELAKK-KMEAMNEVAADADLDDAKMKKTPDSIDRVDHEQPEKMSLSLKK 232


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 227 KDYYEYGEAKTDSSENYKKPVNDDRNIV 254
           K +Y   + KTDS+E   + VN+   +V
Sbjct: 211 KAFYSLEKMKTDSTEELARIVNEANRLV 238


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 87   KLKIDFEELVRKVKERIQNDLAVTASSDVKKIKTSQETSDYSHAKKPKLTYDHKKTPKRI 146
            KL+   EEL  K +ER +     TA  D+ ++      S +SH    KLT  H     + 
Sbjct: 932  KLEDVVEELEGKNRERDELIRYSTALRDLTQMMRDIRKSRFSHLH--KLT-THMALRVKH 988

Query: 147  RTNSIMQQKHDISKIK 162
            +  +IMQ ++ + K++
Sbjct: 989  KFTNIMQIRNYLGKLR 1004


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 201 NSQYETFEAVHLISKNDSYEEYVTPKKDYYEYG 233
           N+  +TFE + L   N+  E+   P+   Y+YG
Sbjct: 501 NNAGKTFERLLLDRLNEHLEDSDNPQLSEYQYG 533


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 14/63 (22%), Positives = 25/63 (39%)

Query: 235 AKTDSSENYKKPVNDDRNIVTEAVATRFIANALTETKKSKVASGPATDGAVLKTRGTMIP 294
           A++   +   K +++     T A+A   + N +  +     A  PA   +   T G   P
Sbjct: 909 ARSTPKKQNLKFIDEASTPSTSAMAATIVPNPVQASPSPATAPAPAKTTSTDSTNGLETP 968

Query: 295 TRE 297
           T E
Sbjct: 969 TSE 971


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.129    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,300
Number of Sequences: 2123
Number of extensions: 13410
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 7
length of query: 349
length of database: 516,269
effective HSP length: 65
effective length of query: 284
effective length of database: 378,274
effective search space: 107429816
effective search space used: 107429816
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 48 (23.4 bits)