Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001651-TA|BGIBMGA001651-PA|IPR001484|Pyrokinin,
IPR000437|Prokaryotic membrane lipoprotein lipid attachment site,
IPR008730|Pheromone biosynthesis activating neuropeptide
(187 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g66430.1 68414.m07546 pfkB-type carbohydrate kinase family pr... 31 0.36
At2g29510.1 68415.m03584 expressed protein 31 0.48
At5g09770.1 68418.m01131 ribosomal protein L17 family protein co... 29 1.9
At3g42990.1 68416.m04515 hypothetical protein 29 1.9
At5g36020.1 68418.m04339 hypothetical protein similar to At5g281... 29 2.6
At2g15900.1 68415.m01822 phox (PX) domain-containing protein wea... 29 2.6
At4g29740.2 68417.m04236 FAD-binding domain-containing protein /... 28 3.4
At4g29740.1 68417.m04235 FAD-binding domain-containing protein /... 28 3.4
At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative... 27 5.9
At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam ... 27 5.9
At5g61780.1 68418.m07753 tudor domain-containing protein / nucle... 27 7.8
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 27 7.8
>At1g66430.1 68414.m07546 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 384
Score = 31.5 bits (68), Expect = 0.36
Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Query: 17 SIFFASCTDMKDESDRGAHSERGALWFGPRLGKRSMKPSTEDNRQTFLRLLEAADALKFY 76
S+ C + + A L + P L + + PS ++ R+ L + E AD +K
Sbjct: 199 SLITEPCKSAHISAAKAAKEAGVILSYDPNL-RLPLWPSADNAREEILSIWETADIIKIS 257
Query: 77 YDQLPYERQADEPETKVTKKIIFTPKL 103
+++ + + ++P + +F PKL
Sbjct: 258 EEEIVFLTKGEDPYDDNVVRKLFHPKL 284
>At2g29510.1 68415.m03584 expressed protein
Length = 839
Score = 31.1 bits (67), Expect = 0.48
Identities = 31/109 (28%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 57 EDNRQTFLRLLEAADALKFYYDQLPYERQADEPETKVTKKIIFTPKLGRSVAKPQTHESL 116
E NR+ F L D P+ R+AD K+I F + RS + P++ ++
Sbjct: 315 ESNRKGFTERLAHGKTAVLDSDVGPFRREADGGSKPFLKRISFLSE--RSCSAPRSRKA- 371
Query: 117 EFIPRLGRRLSEDMPATPADQEMYQPDPEEMESRTRYFSPRLGRTMSFS 165
E P R L T Q +P + + R R SP R +SFS
Sbjct: 372 ESSPSRSRTLDRRSTETLPKQSDQKP-AKVLSERARSISP--FRRLSFS 417
>At5g09770.1 68418.m01131 ribosomal protein L17 family protein
contains Pfam profile: PF01196 ribosomal protein L17
Length = 160
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 116 LEFIPRLGRRLSEDMPATPADQEMYQPDPEEMESRTRYFSP 156
+EFI R L + PATP + DP E TR F+P
Sbjct: 110 IEFIDR-ENELRQSKPATPQPPQRVPLDPWERSRLTRQFAP 149
>At3g42990.1 68416.m04515 hypothetical protein
Length = 129
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 65 RLLEAADALKFYYDQLPYERQADEPETKVTKKIIFTPKLGRSVAKPQTHESLEFIPRLGR 124
R+L A D K+ +++ +A T T ++IF P+ + + H + G+
Sbjct: 36 RVLRADD--KYLGNRIKESSRARLENTSETLRVIFRPEFSSASGTSRYHPEANLVNASGK 93
Query: 125 RLSEDMPATPADQEMYQPDPEEMESRTRYFSPR 157
R + + P EE + ++ +P+
Sbjct: 94 RSNSHKTSRLTTNRQEVPGSEENSLKPKHLNPK 126
>At5g36020.1 68418.m04339 hypothetical protein similar to At5g28170,
At1g35110, At1g44880, At3g42530, At4g19320, At4g03970,
At3g43010, At2g10350
Length = 721
Score = 28.7 bits (61), Expect = 2.6
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 47 LGKRSMKPSTEDNRQTFLRLLEAADALKFYYDQLPYERQADEPETKVTKKIIFTPKLGRS 106
L ++ P +DN LE +A + P E D+ T+VT + T S
Sbjct: 591 LSQKEQSPLEQDNIME--ETLETVEASHSVLETQPEENIDDDHMTEVTLESAAT---SHS 645
Query: 107 VAKPQTHESLEFIPRLGRRLSEDMPATPADQEMYQPD 143
V PQ + +E + +++ +MPA+ QP+
Sbjct: 646 VELPQPDDPMELHVYINIQVTLEMPASSHSVSEAQPE 682
>At2g15900.1 68415.m01822 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 1009
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 18 IFFASCTDMKDESDRGAHSERGALWFGPRLGKRSMKPST-EDNRQTFLRLLEAADALKFY 76
+FF D ++ SD SE+ G G + KPS+ E + F R A++ KF
Sbjct: 884 VFFTRLNDSQEASDETDPSEKTYQMAGQLGGMKVTKPSSFEQQLEAFRR---ASEIKKFL 940
Query: 77 YDQLP 81
+D P
Sbjct: 941 FDGAP 945
>At4g29740.2 68417.m04236 FAD-binding domain-containing protein /
cytokinin oxidase family protein similar to cytokinin
oxidase, Zea mays [gi:3882018] [gi:3441978]
Length = 524
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 159 GRTMSFSPRLGRELSYGMFNVLGTFAV 185
G M+ SP+L EL YG+ LG F +
Sbjct: 212 GEMMTCSPKLNPELFYGVLGGLGQFGI 238
>At4g29740.1 68417.m04235 FAD-binding domain-containing protein /
cytokinin oxidase family protein similar to cytokinin
oxidase, Zea mays [gi:3882018] [gi:3441978]
Length = 428
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 159 GRTMSFSPRLGRELSYGMFNVLGTFAV 185
G M+ SP+L EL YG+ LG F +
Sbjct: 212 GEMMTCSPKLNPELFYGVLGGLGQFGI 238
>At5g09350.1 68418.m01083 phosphatidylinositol 4-kinase, putative
strong similarity to gi:4467359
Length = 1116
Score = 27.5 bits (58), Expect = 5.9
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 81 PYERQADEPET---KVTKKIIFTP-KLGRSVAKPQTHESLEFIPRLGRRLSEDMPATPAD 136
P R +EP T KV K + + KL P T +SL F P G L +D AD
Sbjct: 152 PLMRPHNEPSTPGSKVLNKFLSSKQKLFSLTLSPPTQKSLLFSPTSGSNLQDDGSQLSAD 211
>At3g06290.1 68416.m00722 SAC3/GANP family protein contains Pfam
profile: PF03399 SAC3/GANP family
Length = 1720
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 50 RSMKPSTEDNRQTFLRLLEAADALKFYYDQLPYERQADEP 89
++MKP DN+QTF L + DALK D LP +++P
Sbjct: 443 KTMKPL--DNKQTFNSLESSRDALK--GDALPDYENSEQP 478
>At5g61780.1 68418.m07753 tudor domain-containing protein / nuclease
family protein contains Pfam domains PF00567: Tudor
domain and PF00565: Staphylococcal nuclease homologue
Length = 985
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 80 LPYERQADEPETKVTKKIIFTPKLGR--SVAKPQTHESLEFIPRL 122
L + R PE +T + PK+ R + +P ES EF+ +L
Sbjct: 30 LTHNRAGPPPEKTITLSSLMAPKMARRGGIDEPFAWESREFLRKL 74
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 27.1 bits (57), Expect = 7.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 83 ERQADEPETKVTKKIIFTPKLGRSVA 108
E + EP+ KVT K+ F ++G VA
Sbjct: 83 EEEVIEPQAKVTNKVYFDVEIGGEVA 108
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,421,025
Number of Sequences: 28952
Number of extensions: 181411
Number of successful extensions: 401
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 396
Number of HSP's gapped (non-prelim): 13
length of query: 187
length of database: 12,070,560
effective HSP length: 77
effective length of query: 110
effective length of database: 9,841,256
effective search space: 1082538160
effective search space used: 1082538160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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