BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001650-TA|BGIBMGA001650-PA|IPR001577|Peptidase M8, leishmanolysin (568 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.43 SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 29 1.7 SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 28 4.0 SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 28 4.0 SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyc... 27 7.0 SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 27 7.0 SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 27 9.3 SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyce... 27 9.3 >SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosaccharomyces pombe|chr 1|||Manual Length = 2363 Score = 31.1 bits (67), Expect = 0.43 Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 9/83 (10%) Query: 304 GKGLGCKFAMSSCKQWMNLQRLRRRNPAPFCERIKGNPLRTECSPRRSAVVLCNLVR--- 360 GKG GC F S + W+ R P ER GN L + R S V + + Sbjct: 645 GKGPGCGFWAPSWRVWL----FFLRGIVPLLERWLGNLLARQFEGRHSTGVAKQITKQRV 700 Query: 361 --HDNLLPRAYQHFDILPNVPPG 381 H +L RA DIL +P G Sbjct: 701 DSHQDLELRAAVMNDILDMIPEG 723 >SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces pombe|chr 2|||Manual Length = 987 Score = 29.1 bits (62), Expect = 1.7 Identities = 14/58 (24%), Positives = 28/58 (48%) Query: 388 GSVSLADYCPYLQEFTWRHKSVLIRGSRCSYEENTPKIDLNFALENYGQHSKCFEHSD 445 G+ + D P+L F RH+ + C ++ ++ ++ N L++Y H F + D Sbjct: 914 GNPDVLDSSPHLLSFNKRHRLADVVADVCRFQSSSYEMQSNTDLQSYILHRCRFVNQD 971 >SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 682 Score = 27.9 bits (59), Expect = 4.0 Identities = 10/24 (41%), Positives = 16/24 (66%) Query: 522 FAARSEYCKPGEEPLPPNLYPNDF 545 F A S +C PG + L ++YP++F Sbjct: 198 FVALSSFCPPGGKLLKVSIYPSEF 221 >SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 528 Score = 27.9 bits (59), Expect = 4.0 Identities = 9/20 (45%), Positives = 14/20 (70%) Query: 430 ALENYGQHSKCFEHSDKVWE 449 AL+N+ H++CF + VWE Sbjct: 64 ALKNFSYHARCFHATRAVWE 83 >SPBC16H5.09c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces pombe|chr 2|||Manual Length = 372 Score = 27.1 bits (57), Expect = 7.0 Identities = 10/21 (47%), Positives = 10/21 (47%) Query: 386 YGGSVSLADYCPYLQEFTWRH 406 YGG S C Y F WRH Sbjct: 156 YGGMKSYRQMCRYFSGFFWRH 176 >SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 470 Score = 27.1 bits (57), Expect = 7.0 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 54 PDDEPATEVSENNLDERSDVIDEDSEPVGVK-DTDFMLY 91 PDDE + E+NL E ++D +S VK DT Y Sbjct: 114 PDDEEEFVMEEDNLGEAPLLVDSESYEASVKADTSRKAY 152 >SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit |Schizosaccharomyces pombe|chr 1|||Manual Length = 1405 Score = 26.6 bits (56), Expect = 9.3 Identities = 12/31 (38%), Positives = 16/31 (51%) Query: 52 PPPDDEPATEVSENNLDERSDVIDEDSEPVG 82 P P PA +E N+D + +DE PVG Sbjct: 210 PIPSSPPAALETEENVDSQPMELDEPELPVG 240 >SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyces pombe|chr 3|||Manual Length = 282 Score = 26.6 bits (56), Expect = 9.3 Identities = 17/52 (32%), Positives = 25/52 (48%) Query: 348 PRRSAVVLCNLVRHDNLLPRAYQHFDILPNVPPGQEAYYGGSVSLADYCPYL 399 PR + + NL D+LL RA DIL N G E G ++ + + +L Sbjct: 154 PREPPMKVTNLESRDSLLTRARGFTDILFNEAIGFEGESGKTIVVVSHGIFL 205 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.321 0.136 0.444 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,888,710 Number of Sequences: 5004 Number of extensions: 128952 Number of successful extensions: 283 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 273 Number of HSP's gapped (non-prelim): 12 length of query: 568 length of database: 2,362,478 effective HSP length: 76 effective length of query: 492 effective length of database: 1,982,174 effective search space: 975229608 effective search space used: 975229608 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 56 (26.6 bits)
- SilkBase 1999-2023 -