GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001650-TA|BGIBMGA001650-PA|IPR001577|Peptidase M8,
leishmanolysin
         (568 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    28   0.24 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    27   0.42 
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    24   2.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   6.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   6.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   9.0  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 27.9 bits (59), Expect = 0.24
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 150 EMLHALGFSVSLFAFYRDDNGEPLTERRPDTGNPPLDEELQIHKWSDRVVRNVTRKNWMI 209
           E+L+  G  + +FA  R +  E + +R     +P +  ELQI K S     N   K W+ 
Sbjct: 748 EILYKPGDHLGVFACNRSELVEAILKRVQTPFDPDVPIELQIQKQSH--TPNGIVKTWIA 805

Query: 210 RGGYMERTFHMMV 222
              Y+  +  +++
Sbjct: 806 HDRYLPNSLRILL 818


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 27.1 bits (57), Expect = 0.42
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 347 SPRRSAVVLCNLVRHDNLLPRAYQHFDILP 376
           S RR   V   ++R +NL   +Y  F ILP
Sbjct: 280 SSRREFAVSTRILRDENLSQNSYHEFQILP 309


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 8/12 (66%), Positives = 11/12 (91%)

Query: 400 QEFTWRHKSVLI 411
           +++TWRH SVLI
Sbjct: 386 KQYTWRHTSVLI 397


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 22   QRVNVLNASYMPCYVCNSTGHD--CRALPRYQPPPDDE-PATEVSENNLDERSDVIDEDS 78
            + V+  +A    CYV N+ GHD     L  + PP   +   T  + N+L  +      D+
Sbjct: 1334 KEVDRTDAGEYSCYVENTFGHDTVTHQLIVHAPPHSPQITLTATTTNSLTMKVRPHPTDN 1393

Query: 79   EPV 81
             P+
Sbjct: 1394 API 1396


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 425 IDLNFALENYGQHSKCF 441
           IDL + +++YG H K +
Sbjct: 337 IDLGYVVDSYGNHVKLY 353


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 201  NVTRKNWMIRGGYMERTFHMMVTPRV 226
            N+  K W ++G    R FH  V P V
Sbjct: 1017 NMQWKIWPMKGEEKSRLFHYSVVPFV 1042


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,769
Number of Sequences: 429
Number of extensions: 8722
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 7
length of query: 568
length of database: 140,377
effective HSP length: 61
effective length of query: 507
effective length of database: 114,208
effective search space: 57903456
effective search space used: 57903456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)