GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001649-TA|BGIBMGA001649-PA|undefined
         (245 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    28   0.29 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    27   0.67 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   1.2  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    25   2.0  
Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.           25   2.7  
Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.           25   2.7  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.7  

>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 13/44 (29%), Positives = 25/44 (56%)

Query: 68  NPKDAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQ 111
           NP +A++ D  +  INDF+ K +    E +D+   +K+   N++
Sbjct: 96  NPLEALQIDAIVDTINDFRLKIAIVAYEPDDMVKEKKMVTLNNE 139


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 3/88 (3%)

Query: 33  DKVGYKLRD-NENFKNKDDK--HIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKT 89
           DKV   L +  + FK KD    + A G+ R  P     N +  ++ D       D+K   
Sbjct: 129 DKVYRGLNNYTQFFKKKDSAQGNAASGMVRKGPIRAPANIRSTVRWDYQPDICKDYKETG 188

Query: 90  SEGLNESEDVNHSRKVYKENDQELSERG 117
             G  +S    H R  YK   Q   E G
Sbjct: 189 YCGFGDSCKFLHDRSDYKHGWQMEQEGG 216


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 151  KSEGNILRDSKTKENIETKNDFDQLIDDVEKKQ 183
            K E  ++R +  +E    +N+  QL DDV KK+
Sbjct: 1095 KREAYLMRVAVLEEITAKRNEMRQLYDDVRKKR 1127


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 33  DKVGYKLRD-NENFKNKDDK--HIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKT 89
           DKV   L +  + FK KD    + A G+ R  P     N +  ++ D       D+K   
Sbjct: 129 DKVYRGLNNYTQFFKKKDSAQGNAASGMVRKGPIRAPANIRSTVRWDYQPDICKDYKETG 188

Query: 90  SEGLNESEDVNHSRKVYKENDQ 111
             G  +S    H R  YK   Q
Sbjct: 189 YCGFGDSCKFLHDRSDYKHGWQ 210


>Z22930-6|CAA80518.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/75 (18%), Positives = 32/75 (42%)

Query: 140 LIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPL 199
           L+  +  +   + +GN +    +   +ET+  F  L+  VE  ++E  +E     T    
Sbjct: 116 LVGVLRTVEHPQYDGNTIDFDFSLMELETELTFSDLVQPVELPEHEEPVEPGTMATVSGW 175

Query: 200 STVLTMLDQTEIKRA 214
               + ++ ++  RA
Sbjct: 176 GNTQSAVESSDFLRA 190


>Z18890-1|CAA79328.1|  277|Anopheles gambiae trypsin protein.
          Length = 277

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 14/75 (18%), Positives = 32/75 (42%)

Query: 140 LIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPL 199
           L+  +  +   + +GN +    +   +ET+  F  L+  VE  ++E  +E     T    
Sbjct: 116 LVGVLRTVEHPQYDGNTIDFDFSLMELETELTFSDLVQPVELPEHEEPVEPGTMATVSGW 175

Query: 200 STVLTMLDQTEIKRA 214
               + ++ ++  RA
Sbjct: 176 GNTQSAVESSDFLRA 190


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 3/74 (4%)

Query: 62  PDVNEVNPKDAIKDDRSLKDINDFK---YKTSEGLNESEDVNHSRKVYKENDQELSERGN 118
           P+       +A+++ R  K    F+   YK  E     ED       Y+ +D E  E   
Sbjct: 444 PESTVSKEMEALREGRQKKVQITFEEEIYKGEEDYEGEEDEEDEEDEYEGDDTEEDEEDE 503

Query: 119 DDLLKLNFVPTNSI 132
           DD L    + T+ +
Sbjct: 504 DDELAAGPLGTSDV 517


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.131    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,658
Number of Sequences: 2123
Number of extensions: 9854
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 8
length of query: 245
length of database: 516,269
effective HSP length: 62
effective length of query: 183
effective length of database: 384,643
effective search space: 70389669
effective search space used: 70389669
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 47 (23.0 bits)