Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001649-TA|BGIBMGA001649-PA|undefined
(245 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 37 0.011
At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearl... 35 0.058
At2g22610.1 68415.m02680 kinesin motor protein-related 35 0.058
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 34 0.10
At5g43560.2 68418.m05326 meprin and TRAF homology domain-contain... 33 0.18
At5g43560.1 68418.m05325 meprin and TRAF homology domain-contain... 33 0.18
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 33 0.18
At3g52550.1 68416.m05782 hypothetical protein 32 0.31
At2g22795.1 68415.m02704 expressed protein 32 0.31
At1g36730.1 68414.m04569 eukaryotic translation initiation facto... 32 0.41
At4g13740.1 68417.m02133 expressed protein 31 0.54
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 31 0.54
At1g03080.1 68414.m00282 kinase interacting family protein simil... 31 0.54
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 31 0.54
At3g30560.1 68416.m03867 hypothetical protein 31 0.72
At3g06980.1 68416.m00829 DEAD/DEAH box helicase, putative contai... 31 0.72
At3g04990.1 68416.m00542 hypothetical protein 31 0.72
At1g04280.1 68414.m00419 expressed protein 31 0.72
At3g42790.1 68416.m04474 PHD finger family protein contains PHD-... 31 0.95
At1g51900.1 68414.m05850 hypothetical protein 31 0.95
At5g54680.1 68418.m06809 basic helix-loop-helix (bHLH) family pr... 30 1.3
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 30 1.3
At4g02510.1 68417.m00343 chloroplast outer membrane protein, put... 30 1.3
At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small GT... 30 1.3
At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 prot... 30 1.3
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 30 1.3
At1g48240.1 68414.m05386 novel plant SNARE 12 (NPSN12) identical... 30 1.3
At4g28200.1 68417.m04042 expressed protein 30 1.7
At4g26190.1 68417.m03770 expressed protein 30 1.7
At3g58650.1 68416.m06537 expressed protein 30 1.7
At5g52230.1 68418.m06483 expressed protein 29 2.2
At4g26630.1 68417.m03837 expressed protein 29 2.2
At3g11950.1 68416.m01473 UbiA prenyltransferase family protein c... 29 2.2
At5g55820.1 68418.m06956 expressed protein 29 2.9
At3g58840.1 68416.m06558 expressed protein 29 2.9
At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zi... 29 2.9
At5g36820.1 68418.m04411 F-box family protein contains Pfam PF00... 29 3.8
At5g36730.1 68418.m04395 F-box family protein contains Pfam PF00... 29 3.8
At2g39300.1 68415.m04825 expressed protein ; expression supporte... 29 3.8
At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putati... 29 3.8
At5g45520.1 68418.m05591 hypothetical protein 28 5.1
At4g09520.1 68417.m01565 2,3-biphosphoglycerate-independent phos... 28 5.1
At3g17360.1 68416.m02218 kinesin motor protein-related similar t... 28 5.1
At2g24990.1 68415.m02988 RIO1 family protein similar to extragen... 28 5.1
At5g62240.1 68418.m07815 expressed protein various predicted pro... 28 6.7
At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putati... 28 6.7
At5g01400.1 68418.m00053 expressed protein contains low similari... 28 6.7
At2g12875.1 68415.m01402 hypothetical protein 28 6.7
At2g03470.2 68415.m00306 myb family transcription factor / ELM2 ... 28 6.7
At2g03470.1 68415.m00305 myb family transcription factor / ELM2 ... 28 6.7
At1g56660.1 68414.m06516 expressed protein 28 6.7
At5g55300.1 68418.m06891 DNA topoisomerase I identical to Swiss-... 27 8.8
At5g40100.1 68418.m04864 disease resistance protein (TIR-NBS-LRR... 27 8.8
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 27 8.8
At3g42100.1 68416.m04322 AT hook motif-containing protein-relate... 27 8.8
At1g76740.1 68414.m08931 expressed protein weak similarity to fi... 27 8.8
At1g22060.1 68414.m02759 expressed protein 27 8.8
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 37.1 bits (82), Expect = 0.011
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 18/205 (8%)
Query: 42 NENFKNKDD-KHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTSEGLNESEDVN 100
NEN +NK+D K + D S A NE + ++ + + D N K + + D N
Sbjct: 599 NENLENKEDKKELKDDESVGAKTNNETSLEEKREQTQKGHD-NSINSKIVDNKGGNADSN 657
Query: 101 HSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLKSEGNILRDS 160
KE + + + ND+ ++ + T S E+E+KK E K +
Sbjct: 658 ------KEKEVHVGDSTNDNNME-SKEDTKS-EVEVKK-NDGSSEKGEEGKENNKDSMED 708
Query: 161 KTKENIETKNDF--DQLIDDVEKKQNETQIEMSKGQTTRPLSTVLTMLDQTEIKRALKND 218
K EN E++ D D+ +DD KQ E QI + + + + + E K+ N+
Sbjct: 709 KKLENKESQTDSKDDKSVDD---KQEEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNE 765
Query: 219 TYVRRIMR--MAAKKRSDYIENAKK 241
VR KK S+ +E +K
Sbjct: 766 NRVRNKEENVQGNKKESEKVEKGEK 790
Score = 36.7 bits (81), Expect = 0.014
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 38 KLRDNENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDD--RSLKDINDFKY--KTSEGL 93
KL++ EN NK+ K D S+N K K++ + K D K K SE
Sbjct: 988 KLKE-ENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEER 1046
Query: 94 NESEDVNHSRKVY-KENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLKS 152
++ SR + K+ ++E E+ + K + E E K + ++ + + K
Sbjct: 1047 KSKKEKEESRDLKAKKKEEETKEKKESENHKSK-KKEDKKEHEDNKSMKKEEDKKEKKKH 1105
Query: 153 EGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQ 194
E +SK+++ E K D ++L D K+ E + E K Q
Sbjct: 1106 E-----ESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQ 1142
Score = 30.7 bits (66), Expect = 0.95
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 25/192 (13%)
Query: 33 DKVGYKLRDNENFK--NKDDKHIADGISRNAPDV-NEVNPKDAIKDDRSLKDINDFKYKT 89
DK+ ++E+ K NK++ H +G S ++ N+ ++++K + + + + K
Sbjct: 403 DKMVNATTNDEDHKKENKEETHENNGESVKGENLENKAGNEESMKGENLENKVGNEELKG 462
Query: 90 SEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINR 149
N S + + + KE +E S+R N E+ M K + E +N
Sbjct: 463 ----NASVEAKTNNESSKEEKREESQRSN--------------EVYMNKETTKG-ENVN- 502
Query: 150 LKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPLSTVLTMLDQT 209
+G + DS ++E K D +D E N T+ + Q +ST LD
Sbjct: 503 --IQGESIGDSTKDNSLENKEDVKPKVDANESDGNSTKERHQEAQVNNGVSTEDKNLDNI 560
Query: 210 EIKRALKNDTYV 221
KND V
Sbjct: 561 GADEQKKNDKSV 572
Score = 30.7 bits (66), Expect = 0.95
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 71 DAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTN 130
D+ KD+ SL++ D K K ++ + + N+ +E N D + + N
Sbjct: 510 DSTKDN-SLENKEDVKPKVDANESDGNSTKERHQEAQVNNGVSTEDKNLDNIGADEQKKN 568
Query: 131 SIELEMKKILIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVE---KKQNETQ 187
+E+ + R +++GN +S EN+E K D +L DD K NET
Sbjct: 569 DKSVEVTTNDGDHTKE-KREETQGNN-GESVKNENLENKEDKKELKDDESVGAKTNNETS 626
Query: 188 IEMSKGQTTR 197
+E + QT +
Sbjct: 627 LEEKREQTQK 636
Score = 30.7 bits (66), Expect = 0.95
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 46 KNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKV 105
K K+++ S N + + K+ +D++S+K D K K ++S +K
Sbjct: 1061 KKKEEETKEKKESENHKSKKKEDKKEH-EDNKSMKKEEDKKEKKKHEESKSRKKEEDKKD 1119
Query: 106 YKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLKSEGNILRDSKTKEN 165
++ + + S + +D K + ++L +KK ++ + N KSE + SK+++N
Sbjct: 1120 MEKLEDQNSNKKKED--KNEKKKSQHVKL-VKKESDKKEKKENEEKSETKEIESSKSQKN 1176
Query: 166 IETKNDFDQLIDDVEKKQNE 185
K + D +KK+ E
Sbjct: 1177 EVDKKEKKSSKDQQKKKEKE 1196
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/72 (20%), Positives = 33/72 (45%)
Query: 150 LKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPLSTVLTMLDQT 209
++ +G + DS ++N+E+K D ++ + + ++ + Q +ST TM +
Sbjct: 335 VEGQGESIEDSDIEKNLESKEDVKSEVEAAKNAGSSMTGKLEEAQRNNGVSTNETMNSEN 394
Query: 210 EIKRALKNDTYV 221
+ ND V
Sbjct: 395 KGSGESTNDKMV 406
>At5g56000.1 68418.m06988 heat shock protein 81-4 (HSP81-4) nearly
identical to heat shock protein hsp81.4 [Arabidopsis
thaliana] GI:1906828; contains Pfam profiles PF02518:
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like
domain protein, PF00183: Hsp90 protein
Length = 699
Score = 34.7 bits (76), Expect = 0.058
Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 12/186 (6%)
Query: 8 KDTTNKIYVAKLVRKKTHFAVPYLIDKVGYKLRDNENFKNKDDKHIADGI---SRNAPDV 64
++T + + K++RK L ++ D F K++ GI S+N +
Sbjct: 371 RETLQQNKILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNRTKI 430
Query: 65 NEVNPKDAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKVYKEND---QELSERGNDDL 121
E+ + K L + D+ + EG NE + K EN ++L ++G + L
Sbjct: 431 AELLRYHSTKSGDELTSLKDYVTRMKEGQNEIFYITGESKKAVENSPFLEKLKKKGYEVL 490
Query: 122 LKLNFVPTNSI----ELEMKKILIRQMEFINRLKSEGNILRDSKTKENIE--TKNDFDQL 175
++ + +I E E KK++ E + +++ + + KE E K D L
Sbjct: 491 YMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLEETDDEKKKKEELKEKFEGLCKVIKDVL 550
Query: 176 IDDVEK 181
D VEK
Sbjct: 551 GDKVEK 556
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 34.7 bits (76), Expect = 0.058
Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
Query: 43 ENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKY-KTSEGLNESEDV-- 99
EN +N + K+ G + + E N KD S+ + ++ +Y + E L +++
Sbjct: 789 ENIQNLEGKN--KGRDNSYRSLQEKN-KDLQNQLDSVHNQSEKQYAQLQERLKSRDEICS 845
Query: 100 NHSRKVYKENDQELSERGNDDLL----KLNFVPTNSIELEMKKILIRQM--EFINRLK-S 152
N +KV KE + +L ER D K+ + N E E ++ +Q ++ N+LK S
Sbjct: 846 NLQQKV-KELECKLRERHQSDSAANNQKVKDLENNLKESEGSSLVWQQKVKDYENKLKES 904
Query: 153 EGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPLSTVLTMLDQTEIK 212
EGN L + + +E K+ +Q + V +Q ++EM + + + + T + E+
Sbjct: 905 EGNSLVWQQKIKELEIKHKDEQSQEAVLLRQKIKELEMRLKEQEKHIQEMATTREFPEVA 964
Query: 213 RALKND 218
A N+
Sbjct: 965 NATPNE 970
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 33.9 bits (74), Expect = 0.10
Identities = 36/163 (22%), Positives = 70/163 (42%), Gaps = 6/163 (3%)
Query: 36 GYKLRDNENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTSEGLNE 95
G K NE + ++K + + + +V D + +LK+ N+ + E N+
Sbjct: 153 GGKANGNEE-GDTEEKLVGGDKGDDVDEAEKVENVDEDDKEEALKEKNEAELAEEEETNK 211
Query: 96 SEDVNHSRKVYK-ENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLKSEG 154
E+V + K E D +++E +D + E E + M+ K E
Sbjct: 212 GEEVKEANKEDDVEADTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMDDKEDEKEES 271
Query: 155 NILRDSKTKENIETKNDFDQLIDDVEK--KQNETQIEMSKGQT 195
N D K E E+ +D + +D++K K+ + + E ++G+T
Sbjct: 272 N--DDDKEDEKEESNDDKEDKKEDIKKSNKRGKGKTEKTRGKT 312
>At5g43560.2 68418.m05326 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 33.1 bits (72), Expect = 0.18
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 36 GYKLRDNENFKNKDDK-HIADGISRNAPDVNEVNPKDAIKDD-------RSLKDINDFKY 87
G K + +N KNK+ + + D AP V+ A+ DD +L+ + +
Sbjct: 298 GLKALEGQN-KNKESRPRLMDTEESTAPIVSVDKDSFALVDDVLLLLEKAALEPLPKKEE 356
Query: 88 KTSEGLNESEDVN----HSRKVYKENDQELSERGND--DLLKLNFVPTNSIELEMKKILI 141
K+S+ N ++D N SR+ + +D+ L+E G ++ L + +N IE+ ++ +
Sbjct: 357 KSSQ--NRTKDGNAGEEFSREAVERDDRRLTELGRRTVEIFVLAHIFSNKIEVAYQEAIA 414
Query: 142 --RQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPL 199
RQ E I + E L +S+ K K + +KKQ + + +KG+ R
Sbjct: 415 WKRQEELIR--EEEEAWLAESEQKG----KRGASEKEKKSKKKQAKQKKNKNKGKEMRKE 468
Query: 200 STVLTMLDQTEIKRALKNDTYVRRIMRMAAKK 231
V T ++ EI++ + VR I +A+K
Sbjct: 469 DKVRTQTEEREIEK----EECVRAIAESSAEK 496
>At5g43560.1 68418.m05325 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 1055
Score = 33.1 bits (72), Expect = 0.18
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 36 GYKLRDNENFKNKDDK-HIADGISRNAPDVNEVNPKDAIKDD-------RSLKDINDFKY 87
G K + +N KNK+ + + D AP V+ A+ DD +L+ + +
Sbjct: 298 GLKALEGQN-KNKESRPRLMDTEESTAPIVSVDKDSFALVDDVLLLLEKAALEPLPKKEE 356
Query: 88 KTSEGLNESEDVN----HSRKVYKENDQELSERGND--DLLKLNFVPTNSIELEMKKILI 141
K+S+ N ++D N SR+ + +D+ L+E G ++ L + +N IE+ ++ +
Sbjct: 357 KSSQ--NRTKDGNAGEEFSREAVERDDRRLTELGRRTVEIFVLAHIFSNKIEVAYQEAIA 414
Query: 142 --RQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPL 199
RQ E I + E L +S+ K K + +KKQ + + +KG+ R
Sbjct: 415 WKRQEELIR--EEEEAWLAESEQKG----KRGASEKEKKSKKKQAKQKKNKNKGKEMRKE 468
Query: 200 STVLTMLDQTEIKRALKNDTYVRRIMRMAAKK 231
V T ++ EI++ + VR I +A+K
Sbjct: 469 DKVRTQTEEREIEK----EECVRAIAESSAEK 496
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 33.1 bits (72), Expect = 0.18
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 138 KILIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVE-KKQNETQIEMSKGQTT 196
K+ R++ + E L+D+KTK +N ++L ++E +KQ +IE +K Q
Sbjct: 867 KVARRELRNLKMAAKETGALQDAKTK----LENQVEELTSNLELEKQMRMEIEEAKSQEI 922
Query: 197 RPLSTVLT 204
L +VLT
Sbjct: 923 EALQSVLT 930
Score = 32.3 bits (70), Expect = 0.31
Identities = 33/163 (20%), Positives = 72/163 (44%), Gaps = 11/163 (6%)
Query: 27 AVPYLIDKVGYKLRDNENFKNK---DDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDIN 83
A+ ++ + +LRD + K+K D + + I D E K+ +L+D+
Sbjct: 924 ALQSVLTDIKLQLRDTQETKSKEISDLQSVLTDIKLQLRDTQETKSKEISDLQSALQDMQ 983
Query: 84 DFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQ 143
+ S+GL + D+ + KE+ L + ++ K + S E ++ +
Sbjct: 984 LEIEELSKGLEMTNDLAAENEQLKESVSSLQNKIDESERKYEEISKISEERIKDEVPVID 1043
Query: 144 MEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNET 186
I +L++E + K K + + ++ ID++++K +ET
Sbjct: 1044 QSAIIKLETE-----NQKLKALV---SSMEEKIDELDRKHDET 1078
>At3g52550.1 68416.m05782 hypothetical protein
Length = 178
Score = 32.3 bits (70), Expect = 0.31
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 90 SEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINR 149
+E E ED K +EN++E E N L +PT+S + I +E +
Sbjct: 49 AEDEEEEEDKEEKEKEKRENEKEEEEEENS--LPGIMIPTSSSSISS---TIDTIEEVPE 103
Query: 150 LKSEGNILRDSKTKENI--ETKNDFDQLIDDVEKKQNET 186
+S N+++ K+ E + E K + + +++++ K + T
Sbjct: 104 TESIENVIKGIKSSERLIFERKGESNSILEEMRNKDSCT 142
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 32.3 bits (70), Expect = 0.31
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 43 ENFKNKDD--KHIADGISRNAPDVNEVNPKD--AIKDDRSLKDINDFKYKTSEGLNESED 98
E K K+D K + S+ + E KD KD + K + E ++ E
Sbjct: 499 EETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEES 558
Query: 99 V-NHSRKVYKE---NDQELSERGNDDLLKLNFVPTNSI-ELEMKKILIRQMEFINRLKSE 153
N + KE + +E E+ N+ + K P E E +KI + K +
Sbjct: 559 KENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEK 618
Query: 154 GNILRD------SKTKENIETKNDFDQLIDDVEKKQNETQIEMSK 192
++ ++++EN+ T+++ + +++ EKK +E E SK
Sbjct: 619 ETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDEDTSESSK 663
>At1g36730.1 68414.m04569 eukaryotic translation initiation factor
5, putative / eIF-5, putative similar to SP|P55876
Eukaryotic translation initiation factor 5 (eIF-5) {Zea
mays}; contains Pfam profiles PF02020:
eIF4-gamma/eIF5/eIF2-epsilon, PF01873: Domain found in
IF2B/IF5
Length = 439
Score = 31.9 bits (69), Expect = 0.41
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 89 TSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKKIL---IRQME 145
+ + +++ +D + R + ENDQ SE +DD+ + E MK+ L +M
Sbjct: 196 SKDKVSKKKDHSPPRSLSDENDQADSEEDDDDVQWQTDTSREAAEKRMKEQLSAVTAEMV 255
Query: 146 FINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPLSTVL 203
++ ++ + + K E + + + EK NE + +S G + L T L
Sbjct: 256 MLSTVEEKKPVAEVKKAPEQVHENGNSKIPENAHEKLVNEIKELLSSGSSPTQLKTAL 313
>At4g13740.1 68417.m02133 expressed protein
Length = 605
Score = 31.5 bits (68), Expect = 0.54
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 108 ENDQELSERGNDDLLKLNFVPTNSIELEMKKI----LIRQMEFINRLKSEGN-ILRDSKT 162
END R + +N P S+ EMK++ R+ E N KS+ + +LR S +
Sbjct: 445 ENDNVYEVRNLNSSDHINSCPYPSVAEEMKRLGGSNKKRKGERRNHEKSDSSKLLRKSPS 504
Query: 163 KENIETKNDFDQLIDDVEKKQ----NETQIEMSKGQTTRPLST 201
K K + +L DD E K+ +E +S+G +ST
Sbjct: 505 KLQGHAKQEIPKLADDSEAKKVFSVDEADFTLSEGDLRLFIST 547
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 31.5 bits (68), Expect = 0.54
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 38 KLRDNENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTSEGLNESE 97
K R+ E K K+ + A DV+E + KD++ D K++ N E
Sbjct: 828 KEREREKEKGKERSKREESDGETAMDVSEGH-----KDEKRKGKDRDRKHRRRHHNNSDE 882
Query: 98 DVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLKSEGNIL 157
DV+ R E+ + + GND K + NS E E + RQ + +R +S + L
Sbjct: 883 DVSSDRDDRDESKKSSRKHGND--RKKSRKHANSPESESENRHKRQKKESSR-RSGNDEL 939
Query: 158 RDSKTKE 164
D + E
Sbjct: 940 EDGEVGE 946
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 31.5 bits (68), Expect = 0.54
Identities = 27/125 (21%), Positives = 64/125 (51%), Gaps = 4/125 (3%)
Query: 77 RSLKDINDFKYKTSEGLNESEDVNHSR-KVYKENDQELSERGNDDLLKLNFVPTNSIELE 135
++L++ + + GL+ +D+ SR + EN ++LSE ++++ N + ++ELE
Sbjct: 695 KTLEEASMSLAEEKSGLHSEKDMLISRLQSATENSKKLSE---ENMVLENSLFNANVELE 751
Query: 136 MKKILIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQT 195
K ++ +E L ++ S+ + + + + I+D+EK+ E ++++ + T
Sbjct: 752 ELKSKLKSLEESCHLLNDDKTTLTSERESLLSHIDTMRKRIEDLEKEHAELKVKVLELAT 811
Query: 196 TRPLS 200
R S
Sbjct: 812 ERESS 816
>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
protein / kinesin motor family protein similar to
kinesin-like protein GB:CAB41097 GI:5541717 from
[Arabidopsis thaliana]; contains Pfam profiles PF00225:
Kinesin motor domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 894
Score = 31.5 bits (68), Expect = 0.54
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 23/152 (15%)
Query: 72 AIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNS 131
A+K + LK +F YK+ L++ +V KV EN+++L + +DD+ ++N N
Sbjct: 399 AMKVENMLKIKEEFDYKS---LSKKLEVQLD-KVIAENERQL-KAFDDDVERINRQAQNR 453
Query: 132 IELEMKKILIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMS 191
I E++K +E KE ++ + ++ + + +E+K Q
Sbjct: 454 IS-EVEKNFAEALE-----------------KEKLKCQMEYMESVKKLEEKLISNQRNHE 495
Query: 192 KGQTTRPLSTVLTMLDQTEIKRALKNDTYVRR 223
G+ ++ V+T + T +K +L+N+ +R+
Sbjct: 496 NGKRNGEVNGVVTASEFTRLKESLENEMKLRK 527
>At3g30560.1 68416.m03867 hypothetical protein
Length = 1473
Score = 31.1 bits (67), Expect = 0.72
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 151 KSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPLSTVLTMLDQTE 210
K+E N + K ++++ + FD + E+K + + SK + + TM++
Sbjct: 368 KTETNTSKRKKKQKDVSMRQWFDYRLQ--ERKDEKHILLRSKRLLQQFIVDAFTMIESNR 425
Query: 211 IKRALKNDTYVRRIMRMAAKKRSDYIEN 238
++ KN T +R + A + SD +N
Sbjct: 426 LRFIKKNQTKLRSTNKQAVQDASDAGDN 453
>At3g06980.1 68416.m00829 DEAD/DEAH box helicase, putative contains
Pfam profile: PF00270 DEAD/DEAH box helicase
Length = 781
Score = 31.1 bits (67), Expect = 0.72
Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 99 VNHSRKVYKENDQELSERGNDDLLKLN--FVPTNSIELEMKKILIRQMEFINRLKSEGNI 156
V ++ N++E + +D+ + F ++ ++L KK+ ++ + + +
Sbjct: 119 VTQKKQHMSHNEEEDEDDASDENYSADEGFGSSSILDLMRKKLAMKAIPRSGKSAERNEV 178
Query: 157 LRDSKTKENIETKNDFDQLIDDVE 180
R SK +E+ E++ D D+L D E
Sbjct: 179 KRASKVRESRESRRDLDRLEGDDE 202
>At3g04990.1 68416.m00542 hypothetical protein
Length = 227
Score = 31.1 bits (67), Expect = 0.72
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Query: 83 NDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMK-KILI 141
+D + K+ E +V +K+ +E +EL + N +KL+ + ELE+K L+
Sbjct: 51 SDLEQKSHAFEAEKSEVGDLKKLVEECTEELRSKRNLLTVKLDSLIRVQRELELKDNQLV 110
Query: 142 RQMEFINRLKSEGNILRDSKTKENIET---KNDFDQLIDDVEKKQNETQ 187
+ M + R SE ++ K + ET K + +D +++ + +
Sbjct: 111 QVMAELKRRYSEARHVQKRKREMEDETATKKKELSMTVDQIQESGKQLE 159
>At1g04280.1 68414.m00419 expressed protein
Length = 480
Score = 31.1 bits (67), Expect = 0.72
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 80 KDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLK 123
++++ KY+ EG SE+ + K ++E ++E E G LK
Sbjct: 286 RNVHKQKYRMGEGYKVSEEGTITEKYWEEEEEETKENGKQQNLK 329
>At3g42790.1 68416.m04474 PHD finger family protein contains
PHD-finger domain, INTERPRO:IPR001965
Length = 250
Score = 30.7 bits (66), Expect = 0.95
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 44 NFKNKDDKHIADGISRNAPDVNEVNPKDA-IKDDRSLKDINDFKYKTSEGLNESEDVNHS 102
+F ++ K + + I+ + P + EV A KD S + N K K++ + SE +
Sbjct: 115 SFHKEERKRLFNMIN-DVPTIFEVVTGMAKAKDKSSAANQNGNKSKSNSKVRTSEGKSSK 173
Query: 103 RKVYKENDQELSERGNDD 120
K KE D+E+ E DD
Sbjct: 174 TKQPKEEDEEIDEDDEDD 191
>At1g51900.1 68414.m05850 hypothetical protein
Length = 774
Score = 30.7 bits (66), Expect = 0.95
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 9/97 (9%)
Query: 31 LIDKVGYKLRDNENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTS 90
++ K G++L + NK + I +N D DD S +++ + T
Sbjct: 483 ILKKSGHRLEISRRQYNKPEIEIQVNEKEEKKVIN--TDMDIRYDDESPEEVETYSSLTD 540
Query: 91 EGLNES------EDVNHSRKVYKENDQEL-SERGNDD 120
+ S EDVNH +VYK + ++ ER N+D
Sbjct: 541 DEEERSKEDTSMEDVNHKHEVYKFSLTDIKEERSNED 577
>At5g54680.1 68418.m06809 basic helix-loop-helix (bHLH) family
protein similar to unknown protein (pir |B71406)
Length = 234
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/83 (22%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 110 DQELSERGNDDLLKLNFV--PTNSIELEMKKILIRQMEFINRLKSEGNILRDSKT--KEN 165
+++ +R ND ++L + P N + + IL+ + + +L+ E L+DS + ++
Sbjct: 80 EKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDK 139
Query: 166 I-ETKNDFDQLIDDVEKKQNETQ 187
I E K + ++L D+ ++ + E +
Sbjct: 140 IKELKTEKNELRDEKQRLKTEKE 162
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/153 (16%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 46 KNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKV 105
+ + ++ I + + + V ++ + +R +K+ + + + E + E+ R+
Sbjct: 670 QEEKERKIKEAREKAENERRAVEAREKAEQERKMKEQQELELQLKEAFEKEEENRRMREA 729
Query: 106 Y---KENDQELSE-RGNDDLLKLNFVPTNSIELEMK-KILIRQMEFINRLKS-EGNILRD 159
+ +E ++ + E R ++ + ELE + K + Q E ++K + +
Sbjct: 730 FALEQEKERRIKEAREKEENERRIKEAREKAELEQRLKATLEQEEKERQIKERQEREENE 789
Query: 160 SKTKENIETKNDFDQLIDDVEKKQNETQIEMSK 192
+ KE +E + +L + +E+K+NE +++ ++
Sbjct: 790 RRAKEVLEQAENERKLKEALEQKENERRLKETR 822
>At4g02510.1 68417.m00343 chloroplast outer membrane protein,
putative similar to chloroplast protein import component
Toc159 [Pisum sativum] GI:8489806, chloroplast outer
envelope protein 86 [Pisum sativum] GI:599958,
GTP-binding protein [Pisum sativum] GI:576509
Length = 1503
Score = 30.3 bits (65), Expect = 1.3
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 24/159 (15%)
Query: 33 DKVGYKLRDNENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKY----- 87
D VG + +N+ K + DG S+ +V+ K A D S + D +
Sbjct: 132 DGVGV-VEENKKVKEDVEDIKDDGESKIENGSVDVDVKQASTDGESESKVKDVEEEDVGT 190
Query: 88 -KTSEGLNE---SEDVNH-SRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKK---I 139
K EG +E DV+ S V +E EL+++G D++ +N P S+ +++ K +
Sbjct: 191 KKDDEGESELGGKVDVDDKSDNVIEEEGVELTDKG--DVI-VNSSPVESVHVDVAKPGVV 247
Query: 140 LIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDD 178
++ E LK I D++T +E N FDQ+ DD
Sbjct: 248 VVGDAEGSEELK----INADAET---LEVANKFDQIGDD 279
>At3g46830.1 68416.m05083 Ras-related protein (RAB11A) / small
GTP-binding protein, putative identical to SP|Q96283
Ras-related protein Rab11A {Arabidopsis thaliana};
identical to cDNA Rab11 protein GI:2598228
Length = 217
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 77 RSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEM 136
R L+D D N+S D+NH R V +E+ Q L+E+ L+ + + ++E
Sbjct: 108 RELRDHADSNIVIMMAGNKS-DLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAF 166
Query: 137 KKIL 140
+ IL
Sbjct: 167 QTIL 170
>At3g44050.1 68416.m04718 kinesin motor protein-related KLP2 protein,
Xenopus laevis, PIR:T30335
Length = 1229
Score = 30.3 bits (65), Expect = 1.3
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 70 KDAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPT 129
K ++K ++ +K + K+S+ ESE + K+ QE+ E+G
Sbjct: 1092 KKSLKLEKEIKTMETEIEKSSKTRTESEMELENTIQEKQTIQEMEEQGMS---------- 1141
Query: 130 NSIELEMKKILIRQMEFINRL-KSEGNILRDSKTKENIETKNDFDQLIDDVEK--KQNET 186
E++ I I Q+ F + L K E I+R+ E + K+ +I+ VE K E
Sbjct: 1142 ---EIQNMIIEIHQLVFESDLRKEEAMIIREELIAEELRAKDVHTNMIERVENALKTLEN 1198
Query: 187 QIEMSKGQTTRPLSTVLTMLDQ 208
Q G+ + VL+++ +
Sbjct: 1199 QNNSVSGKIEEEVENVLSLVHE 1220
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 41 DNENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTSEGLNESEDVN 100
+ EN +++D++ D N + E N D DD + ++ ++ NE ED
Sbjct: 170 EEENGNDEEDENGNDEEDENDDENTEENGNDEENDDENTEE------NGNDEENEKEDEE 223
Query: 101 HSRKVYKENDQELSERGNDD 120
+S +EN E E GN+D
Sbjct: 224 NS---MEENGNESEESGNED 240
>At1g48240.1 68414.m05386 novel plant SNARE 12 (NPSN12) identical
to Novel plant SNARE 12 (AtNPSN12) (Swiss-Prot:Q9LNH6)
[Arabidopsis thaliana]
Length = 265
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 32 IDKVGYKLRDNENFKNKDDKHIADGISRNAPDVNE 66
++++ K+RD + + D+ + DG +RN+P VN+
Sbjct: 45 LEELAEKMRDCKRLVKEFDRELKDGEARNSPQVNK 79
>At4g28200.1 68417.m04042 expressed protein
Length = 648
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/89 (22%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 127 VPTNSIELEMKKILIRQMEFINRLKS--------EGNILRDSKTKENIETKNDFDQLIDD 178
V +NS +L ++ + + ++ F+N+LK+ +G+++RD+KT E+ + K++ +L
Sbjct: 174 VCSNSEDLWVEYLRM-ELTFLNKLKARKVALGEDKGSLVRDTKTVEDEQWKDENKELFMS 232
Query: 179 VEKKQNETQIEMSKGQTTRPLSTVLTMLD 207
+++K+ + E + + V +D
Sbjct: 233 LDEKEGNEKEENDEDSIVEDVEDVTEKVD 261
>At4g26190.1 68417.m03770 expressed protein
Length = 1067
Score = 29.9 bits (64), Expect = 1.7
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 43 ENFKNKDDKHIAD-GISRNAPDVNEVNPKDAIKDDRSLKDIN-DFKYKTSEGLNESEDVN 100
+N++ D IA ++ N D ++++DD++ K D K + + +E V+
Sbjct: 655 KNYEGNADGEIASKDLASNIED--SATKGESVQDDKNTKKRKKDRKGEVDQDAKGAEGVS 712
Query: 101 HSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLKSEGNILRDS 160
K++ ++ + + K + + +SI+ KK + Q N L +EG +
Sbjct: 713 TVEVTTKKSKKKKNLLDH----KTDNMEEDSIKKNEKKEEVDQ----NDLGAEGVSKVEV 764
Query: 161 KTKENIETKNDFDQLIDDVEKKQN 184
KTK++ KN D DD+E K +
Sbjct: 765 KTKKSKRKKNSLDHKTDDMEGKDD 788
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 29.9 bits (64), Expect = 1.7
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 77 RSLKDINDFKYKTSEGLNE-SEDVNHSRKVY-KENDQELSERGND--DLLKLNFVPTNSI 132
R LK+ + K S + + S D +SR + +N+++ + G + D LK V S
Sbjct: 141 RDLKEKLEAAQKASTSVPQISNDTRNSRYLRGDQNEKKTTVLGKNSYDALKGGEVKPPSF 200
Query: 133 ELEMKKILIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSK 192
+ K ++ + ++ + S GN S KE +E KN K QN SK
Sbjct: 201 AAQAKVSSNQKQDSLS-MSSSGNKRMSSGQKEKVEAKN-------RAVKSQNS-----SK 247
Query: 193 GQTTRPLSTVLTMLDQTEIKRALKNDTYVRRIMRMAAKK 231
G + LST +L Q K+ +++ RR+M K
Sbjct: 248 GSS---LSTGKNVLRQNNQKQNCRDNQQSRRVMNKVVNK 283
>At5g52230.1 68418.m06483 expressed protein
Length = 746
Score = 29.5 bits (63), Expect = 2.2
Identities = 28/129 (21%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 87 YKTSEGLNESEDVNHSRKVYKENDQELSERGN-DDLLKLNFVPTNSIELEMKKILIRQME 145
+K + E+ ++ H + KE+D E + GN +L+L +V S + ++K + ++
Sbjct: 75 FKDASRYVETGNIGHYARKLKESDIEDDDSGNGKTVLRLEYVDKRSADDVLEK--EKTID 132
Query: 146 FINRLKSEGNILRDSKTKENIETKNDF----DQLIDDVEKKQNETQIEMSKGQTTRPLST 201
+ R K N+ + +N + +D Q+++D+ KK+ E + + K + ++
Sbjct: 133 DVRRSKRR-NLSSSDEHSKNCKMTSDLSIVTSQVLEDLGKKE-EVKDPIEKQLIAKRVTR 190
Query: 202 VLTMLDQTE 210
T TE
Sbjct: 191 SQTKASTTE 199
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 29.5 bits (63), Expect = 2.2
Identities = 39/215 (18%), Positives = 90/215 (41%), Gaps = 12/215 (5%)
Query: 32 IDKVGYKLRDNENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTSE 91
++K + EN K+ + +A PD E++ + D+++ + + + K +E
Sbjct: 19 LEKPSEAMAGKENAGGKETQELAKDEDMAEPDNMEIDAQIKKDDEKAETEDKESEVKKNE 78
Query: 92 GLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLK 151
E++ + +V K+ Q + ++D + + +E ++ +E
Sbjct: 79 DNAETQKMEEKVEVTKDEGQAEATNMDEDADGKKEQTDDGVSVE-DTVMKENVE-----S 132
Query: 152 SEGNILRDSKTKENIETK-NDFDQLIDDVEKKQNET-QIEMSKGQTTRPLSTVLTMLDQ- 208
+ N +D + KE ET + D E Q+E + +K T + T++D+
Sbjct: 133 KDNNYAKDDE-KETKETDITEADHKKAGKEDIQHEADKANGTKDGNTGDIKEEGTLVDED 191
Query: 209 --TEIKRALKNDTYVRRIMRMAAKKRSDYIENAKK 241
T++ ++N +++ + K++ D EN K
Sbjct: 192 KGTDMDEKVENGDENKQVENVEGKEKEDKEENKTK 226
>At3g11950.1 68416.m01473 UbiA prenyltransferase family protein
contains Pfam profile PF01040: UbiA prenyltransferase
family
Length = 954
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 142 RQMEFINRLKSEGNILRDSKTKENIETKND------FDQLIDDVEKKQNETQIE 189
R E I L+ E N + D +TK++ ETK + D+ D+ KK ET+ E
Sbjct: 471 RTYETIRGLEIEANEMIDEETKKSTETKTEAPSRIVMDKEGDEETKKSTETETE 524
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 29.1 bits (62), Expect = 2.9
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 48 KDDKHIADGISRNAPDVNEVNPKDAIKDD----RSLKDINDFKYKTSEGLNESEDVN--- 100
K+D++ A+ + + V K DD RS ++ NDFK ++ G N SE+ N
Sbjct: 1660 KEDQNNAEKTRQANSRIPAVRSKSNSSDDTNASRSSRE-NDFKVISNPG-NMSEEANMGI 1717
Query: 101 ------HSRKVYK-ENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQ 143
++ YK +D++ E NDD+ F PT + + ++ +I Q
Sbjct: 1718 EEMEESYNISPYKCSDDEDEEEDDNDDMSNKKFAPTWASKSNVRLAVISQ 1767
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 29.1 bits (62), Expect = 2.9
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 75 DDRSLKDINDFKY---KTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNS 131
+DR+ K I+D+ KT+E + ED+ + + ++EL ER + L
Sbjct: 5 EDRAAKGISDYDQGGVKTTELERKIEDMENKNQELTRENRELKER--LERLTGEIEEMKD 62
Query: 132 IELEMKKILIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDV 179
+E EM + + I + E L T+ +E + + L DD+
Sbjct: 63 VEAEMNQRFGEMEKEIEEYEEEKKALEAISTRA-VELETEVSNLHDDL 109
>At1g80790.1 68414.m09479 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 29.1 bits (62), Expect = 2.9
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Query: 97 EDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELE-MKKILIRQMEFINRLKSEGN 155
+D+ + + E+ +L N+ L L V EL+ + K ++M+ ++R K
Sbjct: 257 DDLANKIAMTNEDLNKLQYMNNEKTLSLRRVLIEKDELDRVYKQETKKMQELSREKINRI 316
Query: 156 ILRDSKTKENIETK-NDFDQLIDDVEKKQNETQIEMSKGQTTRPLSTVLTMLDQTEIKRA 214
+ +E K N+ ++KKQ T++E K + S V+ Q
Sbjct: 317 FREKERLTNELEAKMNNLKIWSKQLDKKQALTELERQKLDEDKKKSDVMNSSLQLASLEQ 376
Query: 215 LKNDTYVRRIMRMAAKKRSD 234
K D V R++ +K+ +
Sbjct: 377 KKTDDRVLRLVDEHKRKKEE 396
Score = 27.9 bits (59), Expect = 6.7
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 8/140 (5%)
Query: 39 LRDNENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTSEGLNESED 98
L + E K +DK +D + ++ + + K DDR L+ +++ K K E LN+
Sbjct: 347 LTELERQKLDEDKKKSD-VMNSSLQLASLEQKKT--DDRVLRLVDEHKRKKEETLNKILQ 403
Query: 99 VNHSRKVYKENDQELSE-RGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLKSEGNIL 157
+ ++ E+ E +G ++K I+ +MKK+ E + SE L
Sbjct: 404 LEKELDSKQKLQMEIQELKGKLKVMKHEDEDDEGIKKKMKKM----KEELEEKCSELQDL 459
Query: 158 RDSKTKENIETKNDFDQLID 177
D+ + ++ + D++++
Sbjct: 460 EDTNSALMVKERKSNDEIVE 479
>At5g36820.1 68418.m04411 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 410
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 11 TNKIYVAKLVRKKTHFAVPYLIDKVGYKLRDNENFKNKDDKHIADGISRNA 61
T K+Y + K+ F V +D Y +R N + +KDD ++ I + A
Sbjct: 43 TKKLYGKTMATKEKEFLVVMTMDLEVYLMRVNLHGIHKDDNNVKSSIMQKA 93
>At5g36730.1 68418.m04395 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 410
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 11 TNKIYVAKLVRKKTHFAVPYLIDKVGYKLRDNENFKNKDDKHIADGISRNA 61
T K+Y + K+ F V +D Y +R N + +KDD ++ I + A
Sbjct: 43 TKKLYGKTMATKEKEFLVVMTMDLEVYLMRVNLHGIHKDDNNVKSSIMQKA 93
>At2g39300.1 68415.m04825 expressed protein ; expression supported
by MPSS
Length = 768
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 160 SKTKENIE-TKNDFDQLIDDVEKKQNETQIEM 190
+ T+E+I KND+D L+ +EK++ E Q+++
Sbjct: 321 ASTREDIRRVKNDWDLLLKRLEKEKTELQVQL 352
>At1g07410.1 68414.m00790 Ras-related GTP-binding protein, putative
similar to GTP-binding protein RAB11C GI:1370146 from
[Lotus japonicus]
Length = 214
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 77 RSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEM 136
R L+D D N+S D+NH R V E+ + L+E+ L+ + + +IE
Sbjct: 108 RELRDHADSNIVIMMAGNKS-DLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAF 166
Query: 137 KKILIRQMEFINR 149
+ IL I++
Sbjct: 167 QTILSEIYHIISK 179
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 159 DSKTKENIETKNDFDQLIDDVEKKQNETQIEMSK 192
D K K N+E D + + EKKQ+E + E SK
Sbjct: 668 DQKGKSNVEGDGDKGKADLEEEKKQDEVEAEKSK 701
>At4g09520.1 68417.m01565 2,3-biphosphoglycerate-independent
phosphoglycerate mutase family protein /
phosphoglyceromutase family protein contains similarity
to 2,3-bisphosphoglycerate-independent phosphoglycerate
mutase 1 (EC 5.4.2.1) (Phosphoglyceromutase 1)
(BPG-independent PGAM 1) (aPGAM 1) (aPGAM-Mj1).
(Swiss-Prot:Q59007) [Methanococcus jannaschii]; contains
weak hit to Pfam profile PF01676: Metalloenzyme
superfamily
Length = 492
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 9/60 (15%)
Query: 56 GISRNAPDVN-EVNPKDAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELS 114
G+ P ++ ++ D +KD+R L + ++ L+ESE+ NH+ KV E +E+S
Sbjct: 157 GVVVKGPKLSGNISGTDPLKDNRLLLE--------AKPLDESEEANHTAKVVNELSREIS 208
>At3g17360.1 68416.m02218 kinesin motor protein-related similar to
KLP2 protein GB:CAA63826 from [Xenopus laevis]
Length = 2008
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 134 LEMKKILIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSK 192
L +KK L R+ L + +L++S + + + KN+ D+L D + K Q E +++ S+
Sbjct: 1440 LYLKKELERKEALFEGLLFDFRLLQESASNKR-DIKNEMDELFDALCKVQLELELKASQ 1497
>At2g24990.1 68415.m02988 RIO1 family protein similar to extragenic
suppressor of the bimD6 mutation (SUDD) [Emericella
nidulans] GI:2338556, RIO1 [Saccharomyces cerevisiae]
GI:1359602; contains Pfam profile PF01163: RIO1 family
Length = 537
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 68 NPKDAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDD 120
NP+ + S +D D Y+T GL ++ +K+ + ND+E E G ++
Sbjct: 422 NPEADVAKITSGQDTGDMLYQTITGLKDALPKIEEQKI-EVNDEEKEEEGEEE 473
>At5g62240.1 68418.m07815 expressed protein various predicted
proteins, Arabidopsis thaliana; expression supported by
MPSS
Length = 366
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/32 (31%), Positives = 22/32 (68%)
Query: 172 FDQLIDDVEKKQNETQIEMSKGQTTRPLSTVL 203
++Q + DV KK+++++ + S TRP +++L
Sbjct: 108 YNQTVKDVSKKKSKSKTKTSNSTLTRPTASLL 139
>At5g59150.1 68418.m07413 Ras-related GTP-binding protein, putative
similar to Ras-related protein Rab11C SP:Q40193 from
[Lotus japonicus]
Length = 217
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 77 RSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEM 136
R L+D D N++ D+NH R V +E+ Q L+E L+ + + ++E
Sbjct: 108 RELRDHADSNIVIMMAGNKA-DLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAF 166
Query: 137 KKILIRQMEFINR 149
+ +L I++
Sbjct: 167 QTVLAEIYHIISK 179
>At5g01400.1 68418.m00053 expressed protein contains low similarity to
symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 158 RDSKTKENIETKNDFDQLIDDVEKKQNE-TQIEMSK 192
R S + + +T D D+ IDD +NE T+IE SK
Sbjct: 1418 RTSDPQASSQTLRDDDEKIDDTATSENEVTEIEKSK 1453
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/57 (26%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 159 DSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTR--PLSTVLTMLDQTEIKR 213
+ K++++ E K++ ++ ++ EK++ E + E KG TT+ P ++ + +T +KR
Sbjct: 23 EEKSEKDEEEKSEEEESKEE-EKEEEEKEEEKKKGMTTKESPPMIIMPVKKKTGLKR 78
>At2g03470.2 68415.m00306 myb family transcription factor / ELM2
domain-containing protein contains Pfam profile: PF00249
Myb-like DNA-binding domain; contains Pfam profile:
PF01448 ELM2 domain
Length = 449
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 87 YKTSEGLNESEDVNHSRKVYKENDQELSERGNDD 120
+ +++ L+E ED N +R Y++N++E NDD
Sbjct: 303 FNSTKSLDE-EDNNGNRSSYEDNEEEEETSSNDD 335
>At2g03470.1 68415.m00305 myb family transcription factor / ELM2
domain-containing protein contains Pfam profile: PF00249
Myb-like DNA-binding domain; contains Pfam profile:
PF01448 ELM2 domain
Length = 450
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 87 YKTSEGLNESEDVNHSRKVYKENDQELSERGNDD 120
+ +++ L+E ED N +R Y++N++E NDD
Sbjct: 304 FNSTKSLDE-EDNNGNRSSYEDNEEEEETSSNDD 336
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 27.9 bits (59), Expect = 6.7
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 71 DAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTN 130
+ +++++ K + K K G E K +++ QE E +D K +
Sbjct: 124 EELEEEKEGKKKKNKKEKDESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKD 183
Query: 131 SIELEMKKILIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEM 190
E KK ++ E + +S+ N + K K+ K D ++ ++ +K+ +ET EM
Sbjct: 184 ESGTEEKKKKPKK-EKKQKEESKSNEDKKVKGKKEKGEKGDLEKEDEEKKKEHDETDQEM 242
Query: 191 SK 192
+
Sbjct: 243 KE 244
>At5g55300.1 68418.m06891 DNA topoisomerase I identical to
Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis
thaliana]
Length = 916
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 169 KNDFDQLIDD---VEKKQNETQIEMSKGQTTRPLSTVLT 204
+ND + D ++K Q+E +IE + RPLS++L+
Sbjct: 95 RNDMPSTVKDRSQLQKDQSECKIEHEDSEDDRPLSSILS 133
>At5g40100.1 68418.m04864 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1017
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 93 LNESEDVNHSRKVYKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLKS 152
LN+S +N R YKEN + ++ D+ L + ++ ++ I EF+ L
Sbjct: 759 LNKSTTLNIRRFSYKENGRPVTLHSFPDIPGLKQLELVNLNIQKLSDGIGHFEFLENLDL 818
Query: 153 EGN 155
GN
Sbjct: 819 SGN 821
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/125 (19%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 65 NEVNPKDAIKDDRSLKDINDFKYKTSEGLNESEDVNHSRKVYKENDQELSERGN--DDLL 122
NE + K+ ++ + + K + + S+D + K ++ +E S +G ++
Sbjct: 295 NEEDEKEKVQSSEEESKVKE-SGKNEKDASSSQDESKEEKPERKKKEESSSQGEGKEEEP 353
Query: 123 KLNFVPTNSIELEMKKILIRQMEFINRLKSEGNILRDSKTKENIETKNDFDQLIDDVEKK 182
+ +S + E K+ E E N +++++ KE E+ + + EKK
Sbjct: 354 EKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKK 413
Query: 183 QNETQ 187
+E+Q
Sbjct: 414 SSESQ 418
>At3g42100.1 68416.m04322 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; weak hit to Pfam profile
PF02178: AT hook motif
Length = 1752
Score = 27.5 bits (58), Expect = 8.8
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 40 RDNENFKNKDDKHIADGISRNAPDVNEVNPKDAIKDDRSLKDINDFKYKTSEGLNESEDV 99
+ E+FKN D K I RN + E+ K +++ +LK+I DF + EG++ S +
Sbjct: 1192 KKREDFKNPDLKLTLAEI-RNYT-LQEIE-KIMLRNGATLKEIQDFPQPSREGIDNSNRL 1248
Query: 100 NHSRKVYKENDQELSERGNDDLLKLN 125
Y D L E+ ++ LN
Sbjct: 1249 VVDELRY-NIDSNLKEKHDEWFQMLN 1273
>At1g76740.1 68414.m08931 expressed protein weak similarity to
fimbriae-associated protein Fap1 (GI:3929312)
[Streptococcus parasanguinis]; weak similarity to 1MDa_1
protein (GI:24620455) [Caenorhabditis elegans]
Length = 1532
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/92 (19%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 150 LKSEGNILRDSKTKENIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPLSTVLTMLDQT 209
+ GN+L +K+K ++ K++ D+L V+ NE ++ + + + +M ++
Sbjct: 198 ISKTGNLLPVNKSKRLVDIKDNEDEL---VKNNVNEVSMDQRRSIRLKARAANQSMGGES 254
Query: 210 EIKRALKNDTYVRRIMRMAAKKRSDYIENAKK 241
R L + + +++ KRS + + K+
Sbjct: 255 SDGRPLCSAKETKEEIKIKQSKRSTVVSSQKE 286
>At1g22060.1 68414.m02759 expressed protein
Length = 1999
Score = 27.5 bits (58), Expect = 8.8
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Query: 105 VYKENDQELSERGNDDLLKLNFVPTNSIELEMKKILIRQMEFINRLKSEGNILRDSKTKE 164
+Y+ L G DL +S+ KIL E + L E RDS TK+
Sbjct: 480 IYQPELDPLQYLGMPDLTSREPNSADSVSAMRDKIL----ELVRGL-DESKAERDSLTKK 534
Query: 165 NIETKNDFDQLIDDVEKKQNETQIEMSKGQTTRPLSTVLTMLDQTEIKRALKNDTYVRRI 224
+ + ++ L+ ++E+ Q + +E+ +T ST L + + + +
Sbjct: 535 MDQMECYYESLVQELEETQRQLLVELQSLRTEH--STCLYSISGAKAEMETLRHDMNEQT 592
Query: 225 MRMAAKKRS 233
+R + +K++
Sbjct: 593 LRFSEEKKT 601
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.312 0.131 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,750,164
Number of Sequences: 28952
Number of extensions: 255723
Number of successful extensions: 897
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 849
Number of HSP's gapped (non-prelim): 90
length of query: 245
length of database: 12,070,560
effective HSP length: 79
effective length of query: 166
effective length of database: 9,783,352
effective search space: 1624036432
effective search space used: 1624036432
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 58 (27.5 bits)
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