GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001648-TA|BGIBMGA001648-PA|IPR001015|Ferrochelatase
         (329 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        26   0.44 
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   3.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   4.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.4  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   7.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.4  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 11/39 (28%), Positives = 23/39 (58%)

Query: 274 LYAKQGVKHLILVPVAFVNEHIETLHELDIEYCDEVAKE 312
           +Y K+ +  L++V ++  N +++      I  C++VAKE
Sbjct: 232 IYDKKAMSDLMIVKLSHCNSYVDGGRNEIILLCEKVAKE 270


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 230 PHEVASTVSRTMEELGGRNPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKH 282
           PH   ST     E L GR P   +     G LP   P T + I   A++ +KH
Sbjct: 334 PH--ISTGFSPYEILYGRTPPNPLDAVTSGLLPVRPPLTREEIHEKARENLKH 384


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
          protein.
          Length = 590

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 21 KTAIVMLNMGGPETTDQVGDYLHRIMTDRDMIQLPVQSKLGPWI 64
          K + + L +G   T  ++  +L   + D D + L +  +LG +I
Sbjct: 36 KLSTIALALGVERTRSELIPFLTETIYDEDEVLLALAEQLGSFI 79


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 91  SQGSLLTQALDQMLPESAPHKHYVA 115
           S+ SL   A     P   PH+ YVA
Sbjct: 366 SRWSLCNSARSNKYPTRVPHRPYVA 390


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query: 101 DQMLPESAPHKHYVAF 116
           D  LPE   ++HY +F
Sbjct: 111 DNFLPERTANRHYYSF 126


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 291  VNEHIETLHELDIEYCDEV 309
            VNE  + +H++D + CD V
Sbjct: 1390 VNESGKLIHKIDAQDCDFV 1408


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,932
Number of Sequences: 317
Number of extensions: 3345
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 6
length of query: 329
length of database: 114,650
effective HSP length: 57
effective length of query: 272
effective length of database: 96,581
effective search space: 26270032
effective search space used: 26270032
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)