Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001648-TA|BGIBMGA001648-PA|IPR001015|Ferrochelatase
(329 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0005 + 17063717-17063866,17065737-17065855,17066903-170672... 210 9e-55
09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,713... 178 6e-45
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 33 0.42
03_05_1142 - 30703333-30703469,30704058-30704205,30704893-307049... 31 1.7
02_02_0392 - 9649858-9650405,9650499-9650670,9650788-9650926,965... 30 2.2
03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559 30 3.0
02_01_0575 - 4264136-4264200,4264589-4264652,4264760-4264879,426... 30 3.0
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 30 3.0
06_03_1245 + 28652216-28652524,28652564-28652761,28652880-286529... 29 3.9
11_01_0036 + 268028-268168,268734-268839,268920-269031,269126-26... 29 6.8
10_08_0734 + 20195434-20196225 29 6.8
06_02_0214 + 13141213-13143741 28 9.0
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 28 9.0
04_04_0267 + 24048649-24049140,24049521-24049835 28 9.0
03_03_0183 + 15214653-15214916,15215043-15215183,15215377-152154... 28 9.0
>05_04_0005 +
17063717-17063866,17065737-17065855,17066903-17067218,
17067579-17067722,17067909-17067926,17068853-17068954,
17069358-17069461,17069543-17069669,17069809-17069961,
17070261-17070361,17070538-17070739,17071245-17071469
Length = 586
Score = 210 bits (514), Expect = 9e-55
Identities = 118/304 (38%), Positives = 181/304 (59%), Gaps = 15/304 (4%)
Query: 21 KTAIVMLNMGGPETTDQVGDYLHRIMTDRDMIQLP-----VQSKLGPWIASRRTEEVKKK 75
K +++LN+GGPET D V +L + D D+I+LP +Q L +I+ R + K+
Sbjct: 167 KIGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQKPLAQFISVVRAPKSKEG 226
Query: 76 YSEIGGGSPILKWTNSQ--GSLLTQALDQML-PESAPHKHYVAFRYVPPFTEDAFREVES 132
Y+ IGGGSP+ + T++Q G + +AL + L + P K YV RY PFTE+A +++
Sbjct: 227 YASIGGGSPLRQITDAQIIGVNMAEALRKALCDKDIPAKVYVGMRYWHPFTEEAIEQIKR 286
Query: 133 DGADRVIIFSQYPQYSCATTGSSLNAIADFYRNRTTPANVKFSLIERWASHKLLAKVFSE 192
DG ++++ YPQ+S +T+GSSL + +R N++ ++I W + K +
Sbjct: 287 DGITKLVVLPLYPQFSISTSGSSLRLLEGIFREDEYLVNMQHTVIPSWYQREGYIKAMAT 346
Query: 193 RIKEKLDKFDEKIRDDVLILFTAHSLPLKAVSR-GDTYPHEVASTVSRTMEELGGR---N 248
I+++L F E + V+I F+AH +PL V GD Y E+ V MEEL R N
Sbjct: 347 LIEKELRTFSEPQK--VMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRGITN 404
Query: 249 PHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILVPVAFVNEHIETLHELDIEYCDE 308
L +QS+VGP+ WL+PYTD+ I ++GVK L+ VP++FV+EHIETL E+D+EY E
Sbjct: 405 SCTLAYQSRVGPVEWLRPYTDETIIELGQKGVKSLLAVPISFVSEHIETLEEIDVEY-KE 463
Query: 309 VAKE 312
+A E
Sbjct: 464 LALE 467
>09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,
7138413-7138538,7138650-7139619,7139641-7139737,
7140026-7140113,7140336-7140396,7140425-7140447,
7140663-7140776,7141193-7141306,7144731-7144825,
7146506-7146824,7147166-7147309,7147463-7147564,
7147868-7147971,7148121-7148247,7148804-7148845,
7148939-7149091,7149326-7149426,7149807-7150227
Length = 1139
Score = 178 bits (433), Expect = 6e-45
Identities = 104/304 (34%), Positives = 167/304 (54%), Gaps = 24/304 (7%)
Query: 14 SGTAVKPKTAIVMLNMGGPETTDQVGDYLHRIMTDRDMIQLP-----VQSKLGPWIASRR 68
S A + K +++LN+GGPET D V +L + D D+I+LP +Q L I++ R
Sbjct: 707 SSHAAEEKVGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISTFR 766
Query: 69 TEEVKKKYSEIGGGSPILKWTNSQGSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAFR 128
+ K+ Y+ IGGGSP+ K T+ Q + L AL + ++ YV RY PFTE+A
Sbjct: 767 APKSKEGYASIGGGSPLRKITDEQANALKVALKK---KNLNANIYVGMRYWYPFTEEAID 823
Query: 129 EVESDGADRVIIFSQYPQYSCATTGSSLNAIADFYRNRTTPANVKFSLIERWASHKLLAK 188
+++ D ++++ YPQYS +T+GSS+ + + + + A + S+IE W K
Sbjct: 824 QIKKDKITKLVVLPLYPQYSISTSGSSIRVLQNIVKEDSYFAGLPISIIESWYQRDGYVK 883
Query: 189 VFSERIKEKLDKFD------------EKIRDDVLILFTAHSLPLKAVS-RGDTYPHEVAS 235
++ I+++L F I +V+I F+AH +PL V+ GD Y ++
Sbjct: 884 SMADLIEKELSIFSNPEESVIGTCHFRMIHVNVMIFFSAHGVPLTYVTDAGDPYRDQMED 943
Query: 236 TVSRTMEELGGR---NPHRLVWQSKVGPLPWLQPYTDDAIKLYAKQGVKHLILVPVAFVN 292
++ M EL R N H L +QS+VGP+ WL+PYTD+ + +QGVK L+ VPV F++
Sbjct: 944 CIALIMGELKSRGILNSHTLAYQSRVGPVQWLKPYTDEVLVELGQQGVKSLLAVPVRFIS 1003
Query: 293 EHIE 296
I+
Sbjct: 1004 LTIQ 1007
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Query: 285 LVPVAFVNEHIETLHELDIEYCDEVAKE 312
L ++FV+EHIETL E+D+EY E+A E
Sbjct: 1031 LSSISFVSEHIETLEEIDMEY-KELALE 1057
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 183 HKLLAK-VFSERIKEKLDKFDEKIRDDVLILFTAHSLPLKAVSRGDTY--PHEVAST 236
H +L K V ERIK+ +D +D I +D+L+ F+ + + RGD PH V T
Sbjct: 248 HSVLPKSVTEERIKQNIDVYDWSIPEDLLVKFS--EIKQVRLLRGDVIVNPHSVYKT 302
>03_05_1142 -
30703333-30703469,30704058-30704205,30704893-30704963,
30705189-30705285,30705371-30705562,30705639-30705977
Length = 327
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 242 EELGGRNPHRLVWQSKVGPLPW--LQPYTDDAIKLYAKQGV 280
+EL G +L Q PLPW YT DA++LY + GV
Sbjct: 196 QELTGVKKPKLDEQESSPPLPWDDKHAYTRDAVELYYQAGV 236
>02_02_0392 -
9649858-9650405,9650499-9650670,9650788-9650926,
9651113-9651334,9651422-9651495,9653042-9653661,
9653810-9653965,9655250-9655347,9655443-9655534,
9655891-9655977
Length = 735
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 263 WLQPYTDDAIKLYAKQGVKHLILVPVAFVNEHIETLHELD-IEYCDEVAKEL 313
W +PY D I L AK+G K +I N +ETL + I C V KE+
Sbjct: 388 WPEPYNKDTIDLLAKEGAKGIIFAQGNTFN-LLETLDACNGIMPCAVVDKEI 438
>03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559
Length = 789
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 174 FSLIERWASHKLLAKVFSERIKEKLDKFDEKIRDDVLILFTAHSLPLKAVSRGDTYPHEV 233
F+LI+++ ++ K + E++KE D +++DV L +A ++A G Y + +
Sbjct: 654 FNLIDKFPPVSVI-KAYVEKVKEAAQDMDRAMQEDVAALRSAKE-AIEAHDSGSDYRYTI 711
Query: 234 ASTVSRTM 241
V + M
Sbjct: 712 MQEVHKLM 719
>02_01_0575 -
4264136-4264200,4264589-4264652,4264760-4264879,
4264906-4265002,4265365-4265437,4265534-4265630,
4265736-4266007,4266114-4266240,4266902-4267139,
4267508-4267620,4267722-4267762,4268569-4268788
Length = 508
Score = 29.9 bits (64), Expect = 3.0
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 86 LKWTNSQGSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAFREVESDGADRVIIFSQYP 145
L +N Q +L D E A K+ AFR +P T+ F+++ G D +IFS
Sbjct: 232 LNISNRQDGILKSHSDIASFEEATTKYPNAFRGIPEDTKKLFKDIPLLGTDN-LIFSNIV 290
Query: 146 QY 147
Y
Sbjct: 291 SY 292
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 29.9 bits (64), Expect = 3.0
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 168 TPANVKFSLIERW---ASHKLLAK-VFSERIKEKLDKFDEKIRDDVLILFT 214
TPA V RW H +L K V ERIK+ LD +D I +D+L F+
Sbjct: 239 TPAQVAL----RWNIQMGHSVLPKSVSEERIKQNLDVYDWSIPEDLLAKFS 285
>06_03_1245 +
28652216-28652524,28652564-28652761,28652880-28652981,
28653663-28653822,28654057-28654439
Length = 383
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 15 GTAVKPKTAIVMLNMGGPETTDQVGDYLHRIMTDRDMIQLP 55
G AVK + ++ GGP ++G Y R+ T RD + LP
Sbjct: 190 GKAVKTRETVLSTRSGGPNYQVELGRYDGRVST-RDSVVLP 229
>11_01_0036 +
268028-268168,268734-268839,268920-269031,269126-269241,
269321-269399,269476-269614,269689-269747,269924-270218,
270303-270362,270502-270933
Length = 512
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 215 AHSLPLKAVSRGDTYPHEVASTVSRTMEELGGR 247
AH+ P KA R D Y HE+ +V + + G R
Sbjct: 433 AHAKPTKAEIRNDNYSHEINKSVVQESIKAGKR 465
>10_08_0734 + 20195434-20196225
Length = 263
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 93 GSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAFREVE 131
G+ L + L + LP ++PH H+V R E+ F E
Sbjct: 188 GAELRELLHRFLPLNSPHHHHVILRAFAEIWEEVFAGYE 226
>06_02_0214 + 13141213-13143741
Length = 842
Score = 28.3 bits (60), Expect = 9.0
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 14 SGTAVKPKTAIVMLNMGGPETTDQVGDYLHRI-MTDRDMIQLPVQSKLGPWIASRRTEEV 72
SG + +P + +NMGGP+ T D L R +TD+ + P +R
Sbjct: 207 SGLSTQPLETVYRVNMGGPKVTAD-NDTLSRTWVTDKKYLVNP--------SVTREVNGG 257
Query: 73 KKKYSEIGGGSPIL 86
K Y + GG +P++
Sbjct: 258 KVNYMKGGGSTPLI 271
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 28.3 bits (60), Expect = 9.0
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 38 VGDYLHRIMTDRDMIQLPVQSKLGPWIASRRTEEVKKKYSEIGGGSPILKWTNSQGSLLT 97
+ YL + + + LP +L + ++ E++K ++ + G+P+ +++ SL
Sbjct: 202 LASYLLKNLKKEEKETLPASFELAEKVINKCYEKLKPVFTPLLRGTPLDEYSEVVTSLFE 261
Query: 98 QALDQMLPES--APHKHYVA 115
ALD + ++ AP K VA
Sbjct: 262 DALDAGVADNSDAPGKDMVA 281
>04_04_0267 + 24048649-24049140,24049521-24049835
Length = 268
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 141 FSQYPQYSCATTGSSLNAIADFYRNRTTPANVKFSLIERWASH 183
F +P+ L A+AD YR R P L+ W SH
Sbjct: 56 FYAFPRLVKHVDDGFLAALADLYRERLRPGWDVLDLMSSWVSH 98
>03_03_0183 +
15214653-15214916,15215043-15215183,15215377-15215448,
15215774-15215863,15215994-15216551
Length = 374
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 124 EDAFREVESDGADRVIIFSQYPQYSCATTG-SSLNAIADFYRNRTTPA 170
EDAFR + + G I+ S++P+ +CA+ + DF R T A
Sbjct: 325 EDAFRVLRARGHGAGILVSRFPKDTCASFSLRDPGEVKDFLRKLVTCA 372
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,022,967
Number of Sequences: 37544
Number of extensions: 423341
Number of successful extensions: 935
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 917
Number of HSP's gapped (non-prelim): 16
length of query: 329
length of database: 14,793,348
effective HSP length: 82
effective length of query: 247
effective length of database: 11,714,740
effective search space: 2893540780
effective search space used: 2893540780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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