Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001648-TA|BGIBMGA001648-PA|IPR001015|Ferrochelatase
(329 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71264-6|CAC35821.1| 374|Caenorhabditis elegans Hypothetical pr... 56 5e-08
AL008986-1|CAC35820.1| 374|Caenorhabditis elegans Hypothetical ... 56 5e-08
Z81062-2|CAB02946.1| 269|Caenorhabditis elegans Hypothetical pr... 31 0.85
AC199172-10|ABO33271.1| 302|Caenorhabditis elegans F-box a prot... 31 1.1
L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protei... 30 2.0
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 30 2.0
AC199172-5|ABO33273.1| 305|Caenorhabditis elegans F-box a prote... 30 2.0
AC199172-2|ABO33275.1| 305|Caenorhabditis elegans F-box a prote... 30 2.6
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 29 6.0
U61954-10|AAL08035.1| 238|Caenorhabditis elegans Hypothetical p... 29 6.0
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 29 6.0
U58752-3|AAB00666.1| 367|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z71264-6|CAC35821.1| 374|Caenorhabditis elegans Hypothetical
protein K07G5.6 protein.
Length = 374
Score = 55.6 bits (128), Expect = 5e-08
Identities = 72/305 (23%), Positives = 119/305 (39%), Gaps = 34/305 (11%)
Query: 17 AVKPKTAIVMLNMGGPETTDQVGDYLHRIMTDRDMIQLPVQSKLGPWIASRRTEEVKKKY 76
A P+T I++L+ G P ++L +++P + E +K
Sbjct: 25 ARSPQTEIILLHAGQPWNEFHAKEFLKNQSAQSMRLRMPNFVHTLIANGKLKNENLKGCI 84
Query: 77 SEIGGGSPILKWTNSQGSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAFREVESDGAD 136
+ + + G + ++LD ++PE P K F++ ED +E++S +
Sbjct: 85 AAYKNVPSLESQVDRLGKKIEESLDTVVPEHGPFKVSRLFQFDEVSFEDQLKEIKSHRSQ 144
Query: 137 RVIIFSQYPQYSCATTGSSLNAIADFYRNRTTP-----ANVKFSLIE------------- 178
I YP +S + + L A ++P N+ S IE
Sbjct: 145 HYIFMPLYPHFSAIDSETLLVKSAKIIEQTSSPLVQGNKNITSSRIEQNSDYSYDVSAIW 204
Query: 179 RWASHKLLAKVFSERIKEKLDKFDEKIRDDVLILFTAHSLPLKAVSRGDTYPHEVASTVS 238
RW +H +LA +S +IKE L K D ++F A P K Y V ++
Sbjct: 205 RWNNHPILADYWSSKIKEVLPKLDG-------VVFAA---PRKFTC---NY-GPVFASCE 250
Query: 239 RTMEELGGRNPHRLVWQSKVG--PLPWLQPYTDDAIKLYAKQGVKHLILVPVAFVNEHIE 296
RTM +LG P RL + S LP +Q K+ + +VP+ V E
Sbjct: 251 RTMNQLGDLIPWRLGFYSSWDSFDLPSMQGVASQVQKIRKTSESGKVAVVPITDVIETFN 310
Query: 297 TLHEL 301
TL+ L
Sbjct: 311 TLYTL 315
>AL008986-1|CAC35820.1| 374|Caenorhabditis elegans Hypothetical
protein K07G5.6 protein.
Length = 374
Score = 55.6 bits (128), Expect = 5e-08
Identities = 72/305 (23%), Positives = 119/305 (39%), Gaps = 34/305 (11%)
Query: 17 AVKPKTAIVMLNMGGPETTDQVGDYLHRIMTDRDMIQLPVQSKLGPWIASRRTEEVKKKY 76
A P+T I++L+ G P ++L +++P + E +K
Sbjct: 25 ARSPQTEIILLHAGQPWNEFHAKEFLKNQSAQSMRLRMPNFVHTLIANGKLKNENLKGCI 84
Query: 77 SEIGGGSPILKWTNSQGSLLTQALDQMLPESAPHKHYVAFRYVPPFTEDAFREVESDGAD 136
+ + + G + ++LD ++PE P K F++ ED +E++S +
Sbjct: 85 AAYKNVPSLESQVDRLGKKIEESLDTVVPEHGPFKVSRLFQFDEVSFEDQLKEIKSHRSQ 144
Query: 137 RVIIFSQYPQYSCATTGSSLNAIADFYRNRTTP-----ANVKFSLIE------------- 178
I YP +S + + L A ++P N+ S IE
Sbjct: 145 HYIFMPLYPHFSAIDSETLLVKSAKIIEQTSSPLVQGNKNITSSRIEQNSDYSYDVSAIW 204
Query: 179 RWASHKLLAKVFSERIKEKLDKFDEKIRDDVLILFTAHSLPLKAVSRGDTYPHEVASTVS 238
RW +H +LA +S +IKE L K D ++F A P K Y V ++
Sbjct: 205 RWNNHPILADYWSSKIKEVLPKLDG-------VVFAA---PRKFTC---NY-GPVFASCE 250
Query: 239 RTMEELGGRNPHRLVWQSKVG--PLPWLQPYTDDAIKLYAKQGVKHLILVPVAFVNEHIE 296
RTM +LG P RL + S LP +Q K+ + +VP+ V E
Sbjct: 251 RTMNQLGDLIPWRLGFYSSWDSFDLPSMQGVASQVQKIRKTSESGKVAVVPITDVIETFN 310
Query: 297 TLHEL 301
TL+ L
Sbjct: 311 TLYTL 315
>Z81062-2|CAB02946.1| 269|Caenorhabditis elegans Hypothetical
protein F15A4.2 protein.
Length = 269
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 282 HLILVPVAFVNEHIETLHELDIEYCDEVAKELRTISELSAR 322
HL+ +P ++E + L +DI ++++RTI +LSAR
Sbjct: 10 HLLNLPTVVISEVLNHLKNIDICILRTTSRKIRTIGKLSAR 50
>AC199172-10|ABO33271.1| 302|Caenorhabditis elegans F-box a protein
protein 37 protein.
Length = 302
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 283 LILVPVAFVNEHIETLHELDIEYCDEVAKELRT 315
L+ +P+ N+ +E LH LD+ C +V + LRT
Sbjct: 8 LLNLPIEIANQVLEKLHLLDMLTCRKVCRSLRT 40
>L23648-5|AAN63385.1| 381|Caenorhabditis elegans Cyclin t protein
1.2, isoform b protein.
Length = 381
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 136 DRVIIFSQYPQYSCATTGSSLNAIADFYRNRTTPANVKFSLIERW 180
D +II +YSCA+ ++ IA F+ N V F L +RW
Sbjct: 24 DVLIITDWSVRYSCASIATACVNIAAFFHNINMDDIVPFELSDRW 68
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 136 DRVIIFSQYPQYSCATTGSSLNAIADFYRNRTTPANVKFSLIERW 180
D +II +YSCA+ ++ IA F+ N V F L +RW
Sbjct: 198 DVLIITDWSVRYSCASIATACVNIAAFFHNINMDDIVPFELSDRW 242
>AC199172-5|ABO33273.1| 305|Caenorhabditis elegans F-box a protein
protein 30 protein.
Length = 305
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 283 LILVPVAFVNEHIETLHELDIEYCDEVAKELRT-ISELSARFLTFSI 328
L+ +P++ N+ +E L ++I C +V + LRT I +L F SI
Sbjct: 8 LLNLPISIANQVLEKLGPVEILTCRKVCRNLRTAIDKLGTHFNKISI 54
>AC199172-2|ABO33275.1| 305|Caenorhabditis elegans F-box a protein
protein 32 protein.
Length = 305
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 283 LILVPVAFVNEHIETLHELDIEYCDEVAKELRT-ISELSARFLTFSI 328
L+ +P++ N+ +E L ++I C +V + LRT I +L F SI
Sbjct: 8 LLDLPISIANQVLEKLGPVEILTCRKVCRSLRTAIDKLGTHFNKISI 54
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 227 DTYPHEVASTVSRTMEELGGRNPHRLVWQS 256
D EV T+ + M++L R PH+ +WQS
Sbjct: 2015 DHQDEEVTRTIKQIMKQLILRMPHQCMWQS 2044
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 227 DTYPHEVASTVSRTMEELGGRNPHRLVWQS 256
D EV T+ + M++L R PH+ +WQS
Sbjct: 2032 DHQDEEVTRTIKQIMKQLILRMPHQCMWQS 2061
>U61954-10|AAL08035.1| 238|Caenorhabditis elegans Hypothetical
protein F41H10.12 protein.
Length = 238
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 186 LAKVFSERIKEKLDKFDEKIRDDVLILFTAHSLP 219
L+ +FS+ K++ D +E++R+D+ + T S P
Sbjct: 141 LSTIFSQAAKQQADSLEEQMREDIKKIATFDSSP 174
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 227 DTYPHEVASTVSRTMEELGGRNPHRLVWQS 256
D EV T+ + M++L R PH+ +WQS
Sbjct: 2015 DHQDEEVTRTIKQIMKQLILRMPHQCMWQS 2044
>U58752-3|AAB00666.1| 367|Caenorhabditis elegans Hypothetical
protein B0218.5 protein.
Length = 367
Score = 28.3 bits (60), Expect = 7.9
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Query: 128 REVESDGADRVIIFSQYPQYSCATTGSSLNAIADFYRNRTTPANVKFSLIERWASHKLLA 187
RE G R+ Q+ T + +N++ + R ++ W S L
Sbjct: 175 REFVKRGEGRLRTQRAKSQFRGTTRYAPINSMLEIDTGRKDDIESWLYMVAEWTSGGLPW 234
Query: 188 KVFSERIKEKLDKFDEKIRDDVLILFTA-HSLPLKAVSRGDTYPHEV 233
+ F +EK+ K+ + +R D I+ ++ PLK R Y E+
Sbjct: 235 RKFKATEREKVLKYKKDVRTDKEIMADLFYNCPLKEFERILKYVDEL 281
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.134 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,301,658
Number of Sequences: 27539
Number of extensions: 356055
Number of successful extensions: 958
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 945
Number of HSP's gapped (non-prelim): 14
length of query: 329
length of database: 12,573,161
effective HSP length: 82
effective length of query: 247
effective length of database: 10,314,963
effective search space: 2547795861
effective search space used: 2547795861
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
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