GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001647-TA|BGIBMGA001647-PA|undefined
         (51 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16GJ3 Cluster: Sec-23 interacting protein P125; n=3; C...    45   3e-04
UniRef50_UPI00015B5390 Cluster: PREDICTED: similar to sec-23 int...    40   0.009
UniRef50_Q9VLS7 Cluster: CG8552-PA; n=3; Sophophora|Rep: CG8552-...    39   0.022
UniRef50_UPI0000DB6CEE Cluster: PREDICTED: similar to CG8552-PA;...    30   7.7  

>UniRef50_Q16GJ3 Cluster: Sec-23 interacting protein P125; n=3;
            Culicidae|Rep: Sec-23 interacting protein P125 - Aedes
            aegypti (Yellowfever mosquito)
          Length = 1587

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 17/32 (53%), Positives = 26/32 (81%)

Query: 1    MLLMLREIYADMGVDPDSTVPQQSLTVQRTRL 32
            ML +++EIY+ MGV  DS +PQQS+T++R R+
Sbjct: 1517 MLFLMKEIYSSMGVQSDSQIPQQSMTIERPRV 1548


>UniRef50_UPI00015B5390 Cluster: PREDICTED: similar to sec-23
            interacting protein P125; n=1; Nasonia vitripennis|Rep:
            PREDICTED: similar to sec-23 interacting protein P125 -
            Nasonia vitripennis
          Length = 1368

 Score = 39.9 bits (89), Expect = 0.009
 Identities = 15/29 (51%), Positives = 24/29 (82%)

Query: 1    MLLMLREIYADMGVDPDSTVPQQSLTVQR 29
            MLL+L+EIY  MG+  D+ +PQQ+L+++R
Sbjct: 1291 MLLILKEIYGSMGIQTDAQLPQQTLSIER 1319


>UniRef50_Q9VLS7 Cluster: CG8552-PA; n=3; Sophophora|Rep: CG8552-PA -
            Drosophila melanogaster (Fruit fly)
          Length = 2016

 Score = 38.7 bits (86), Expect = 0.022
 Identities = 14/29 (48%), Positives = 23/29 (79%)

Query: 1    MLLMLREIYADMGVDPDSTVPQQSLTVQR 29
            +L +++EIYA +G+  DS VPQ S+T++R
Sbjct: 1973 ILFVMKEIYASLGISTDSQVPQSSMTIER 2001


>UniRef50_UPI0000DB6CEE Cluster: PREDICTED: similar to CG8552-PA; n=2;
            Coelomata|Rep: PREDICTED: similar to CG8552-PA - Apis
            mellifera
          Length = 1449

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/27 (48%), Positives = 18/27 (66%)

Query: 1    MLLMLREIYADMGVDPDSTVPQQSLTV 27
            MLL+L+EIY   G+  D+ +P  SL V
Sbjct: 1377 MLLILKEIYGSTGIQTDAQLPALSLQV 1403


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.128    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,854,089
Number of Sequences: 1657284
Number of extensions: 1271343
Number of successful extensions: 3228
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3224
Number of HSP's gapped (non-prelim): 4
length of query: 51
length of database: 575,637,011
effective HSP length: 32
effective length of query: 19
effective length of database: 522,603,923
effective search space: 9929474537
effective search space used: 9929474537
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)