GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001647-TA|BGIBMGA001647-PA|undefined
         (51 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   1.8  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    22   2.4  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 15  DPDSTVPQQSLTVQRTRLQRQDGVITRESP 44
           D  +TVP  S    +  L    G++TR++P
Sbjct: 477 DAPTTVPSDSRVEPQELLSIAAGMVTRKAP 506


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 11/26 (42%), Positives = 13/26 (50%)

Query: 24  SLTVQRTRLQRQDGVITRESPTTSHS 49
           SLTV R    R   V+  E P T H+
Sbjct: 576 SLTVSRRSCLRPARVVIVERPKTEHA 601


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.128    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,630
Number of Sequences: 2123
Number of extensions: 1200
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 51
length of database: 516,269
effective HSP length: 31
effective length of query: 20
effective length of database: 450,456
effective search space:  9009120
effective search space used:  9009120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)