GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001647-TA|BGIBMGA001647-PA|undefined
         (51 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   0.39 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   4.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 0.39
 Identities = 11/38 (28%), Positives = 21/38 (55%)

Query: 9   YADMGVDPDSTVPQQSLTVQRTRLQRQDGVITRESPTT 46
           Y D+ V  D++VP     V+ T ++  +  I+ ++P T
Sbjct: 407 YVDITVTTDASVPSLVSNVRITSVKSSELSISWDAPIT 444


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.0 bits (37), Expect = 4.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)

Query: 21  PQQSLTVQRTRLQRQDGVITRE 42
           PQQ    Q+ + Q+Q G +T +
Sbjct: 841 PQQQQQQQQQQQQQQRGPMTND 862



 Score = 18.2 bits (35), Expect = 8.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 20   VPQQSLTVQRTRLQRQDGVITRESPTTSHSA 50
            V ++ L   R R Q+Q    T+E+ T + +A
Sbjct: 1080 VKERHLMRPRKRDQKQSDDKTKETSTVTAAA 1110


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.128    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,964
Number of Sequences: 429
Number of extensions: 248
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 51
length of database: 140,377
effective HSP length: 31
effective length of query: 20
effective length of database: 127,078
effective search space:  2541560
effective search space used:  2541560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
S2: 35 (18.2 bits)