GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001646-TA|BGIBMGA001646-PA|IPR004177|DDHD, IPR004170|WWE
         (2399 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            31   0.48 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    29   1.1  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           28   2.6  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           28   2.6  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       28   2.6  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    27   4.5  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   5.9  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       27   5.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    27   7.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    27   7.8  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 30.7 bits (66), Expect = 0.48
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 764  ATSRNPHDMHAYEQPSQYHQNPYSYYQSEGQNYQQQAQTIYSST--MLYPGSNLNENISN 821
            A+   P  +H  +Q  Q  Q      Q + Q  QQQ Q    ST   L P + LN +  N
Sbjct: 1288 ASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQQQQQQQQHQPPSTQAQLRPSAPLNTSPPN 1347

Query: 822  TSTYH 826
            +   H
Sbjct: 1348 SWHSH 1352


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
            topoisomerase protein.
          Length = 1039

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 1711 INEVSYKVKATANDNNNAAGSKGCDVSMERVNAANKNVTINLEGATDGVTDDAVT 1765
            +NE + K     N+NNN   + G  V+    NAA  N ++ L G+  G      T
Sbjct: 90   VNEGTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNSSV-LNGSNSGSATTTTT 143


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 775 YEQPSQYHQNPYSYYQSEGQNYQQQAQTIYSSTMLYPGSN-LNENISNTSTYHTPG 829
           Y+   Q  Q      QS+ Q  QQQ Q   S +  + GSN LN   S     H  G
Sbjct: 410 YQPQQQQQQQQQQQPQSQQQQQQQQQQQQQSGSATWSGSNTLNYTQSIQPPAHASG 465


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 486 PTTTNLSLQPDLISSVTMHIPPTTIPSANPMSTGQHVIKKSETHFDPTNIGQTSMDSAVQ 545
           P TT  ++  D  ++ T H+PPTT  + + +         +    DPT    T   +A  
Sbjct: 214 PPTTTTTVWIDPTATTTTHVPPTT-TTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP 272

Query: 546 NASAFVPSTSIP 557
             +   PST  P
Sbjct: 273 PTTNEPPSTPHP 284


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 15/38 (39%), Positives = 20/38 (52%)

Query: 1010 KVIKDAFNDDEQFDFDSLIKPIDKLIDDPFDDLEKEEE 1047
            ++++  F+DD  FD DS         DD  D LE EEE
Sbjct: 86   QIVEYEFDDDLPFDDDSDFDDDSDFDDDVGDRLESEEE 123


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 2/97 (2%)

Query: 1772 GREWYTRIGYESKEHIAMKRIHIVDTVDIDADGLIETLLQPTNRSLAEYNPVKYHWFYRV 1831
            GR W T+   E+   +A+K ++  +    DAD ++E + +  +  +   N +  + +  +
Sbjct: 244  GRRWKTKQFRENSFLLALKDVNFAEQAVTDAD-IVEMMTRACDEVMQRANHLSSNPYRDL 302

Query: 1832 DIEGKSIWRGFSEVDSKALEEAYLSPDLNEKTLVATD 1868
                  + R    +   A E   L  DL E++ VA D
Sbjct: 303  YSWSPELER-LRGICLAARERLRLITDLQERSFVAAD 338


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 18/88 (20%), Positives = 31/88 (35%)

Query: 730 EEETSQTFQDQNTFANHYAQNQGSNFEIFVPNIDATSRNPHDMHAYEQPSQYHQNPYSYY 789
           +++  Q  Q Q        +NQ   ++          R        +Q +Q HQ      
Sbjct: 235 QQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQHQRQQQQQ 294

Query: 790 QSEGQNYQQQAQTIYSSTMLYPGSNLNE 817
           Q + Q  QQQ Q    +T++    N  +
Sbjct: 295 QQQRQQQQQQEQQELWTTVVRRRQNTQQ 322


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 832 ITTETAHTTPHAIITDSNIKFPALVPSKENFDINQ-NTEIAIKNSELKTEQLQNLPTYNV 890
           + T+T  +T +  I D N KF   +  KE  D  +   E+A K  E   E   +    + 
Sbjct: 147 LRTDTGISTKYDEIDDENPKFDKNIDDKEYVDPTKIKEELAKKKMEAMNEVAADADLDDA 206

Query: 891 PQLGHYNKEIPSSIEELTRTAPQK 914
                  K+ P SI+ +    P+K
Sbjct: 207 KM-----KKTPDSIDRVDHEQPEK 225


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 8/23 (34%), Positives = 18/23 (78%)

Query: 495 PDLISSVTMHIPPTTIPSANPMS 517
           PDL+SS+++++P  ++   +P+S
Sbjct: 906 PDLLSSISLYVPSRSLRPRDPLS 928


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 1694 DVKICEYCCDFNTNVFNINEVSYKVKATANDNN 1726
            D ++ E   DF  NVF+I EV   V    N N+
Sbjct: 859  DDELLEIISDFKNNVFSIQEVEQLVTLWKNRND 891


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.131    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,477,980
Number of Sequences: 2123
Number of extensions: 108934
Number of successful extensions: 258
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 242
Number of HSP's gapped (non-prelim): 17
length of query: 2399
length of database: 516,269
effective HSP length: 76
effective length of query: 2323
effective length of database: 354,921
effective search space: 824481483
effective search space used: 824481483
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 56 (26.6 bits)