GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001646-TA|BGIBMGA001646-PA|IPR004177|DDHD, IPR004170|WWE
         (2399 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    26   3.2  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   7.5  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    25   9.9  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
            protein protein.
          Length = 130

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 1418 YPVSTSMRIPPGFEEEYHRRMSGTLHDKTALDKLKD 1453
            Y VS +    P FE E   ++S  L++   L+KLK+
Sbjct: 75   YDVSMTFGPVPKFEGEMAEKISNELNEMCPLEKLKE 110


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.0 bits (52), Expect = 7.5
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 5/48 (10%)

Query: 770 HDMHAYEQPSQ-YHQNP--YSYYQSEGQN--YQQQAQTIYSSTMLYPG 812
           H  H + QP Q  HQ+     + Q+  Q+  YQQQ Q+  +S    PG
Sbjct: 173 HTQHPHMQPQQGQHQSQAQQQHLQAHEQHMMYQQQQQSQAASQQSQPG 220


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
          protein.
          Length = 424

 Score = 24.6 bits (51), Expect = 9.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 66 DVSVYFARLQGTKYISAPLHIDGIP 90
          DV VY    Q T +++ P   DG+P
Sbjct: 61 DVDVYNTEQQSTVFVAIPRIQDGVP 85


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.131    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,723
Number of Sequences: 429
Number of extensions: 34823
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 39
Number of HSP's gapped (non-prelim): 3
length of query: 2399
length of database: 140,377
effective HSP length: 69
effective length of query: 2330
effective length of database: 110,776
effective search space: 258108080
effective search space used: 258108080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 51 (24.6 bits)