Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001646-TA|BGIBMGA001646-PA|IPR004177|DDHD, IPR004170|WWE
(2399 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31480.1 68414.m03854 shoot gravitropism 2 (SGR2) Plant Cell ... 130 1e-29
At5g17160.1 68418.m02010 expressed protein 37 0.19
At1g48620.1 68414.m05439 histone H1/H5 family protein weak simil... 37 0.19
At5g19190.1 68418.m02285 expressed protein predicted protein, Ar... 36 0.25
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 36 0.34
At2g33850.1 68415.m04155 expressed protein contains 1 transmembr... 35 0.78
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 34 1.4
At1g78110.1 68414.m09103 expressed protein 34 1.4
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 33 1.8
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 33 1.8
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 33 1.8
At5g56890.1 68418.m07099 protein kinase family protein contains ... 33 3.1
At5g55020.1 68418.m06853 myb family transcription factor (MYB120... 33 3.1
At2g28290.2 68415.m03434 chromatin remodeling protein, putative ... 33 3.1
At2g28290.1 68415.m03433 chromatin remodeling protein, putative ... 33 3.1
At1g30280.1 68414.m03703 expressed protein contains low similari... 33 3.1
At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related prot... 32 4.1
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 32 5.5
At4g09830.1 68417.m01612 expressed protein 32 5.5
At3g27720.1 68416.m03461 zinc finger protein-related contains Pf... 32 5.5
At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)... 32 5.5
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 32 5.5
At5g27160.1 68418.m03241 hypothetical protein contains Pfam prof... 31 7.2
At5g13970.1 68418.m01633 expressed protein 31 7.2
At1g22335.1 68414.m02794 expressed protein ; expression supporte... 31 7.2
At1g07310.1 68414.m00778 C2 domain-containing protein contains s... 31 7.2
At4g33390.1 68417.m04746 hypothetical protein contains Pfam prof... 31 9.6
At4g18150.1 68417.m02697 hypothetical protein 31 9.6
At3g18810.1 68416.m02389 protein kinase family protein contains ... 31 9.6
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 31 9.6
At2g41520.2 68415.m05131 DNAJ heat shock N-terminal domain-conta... 31 9.6
At2g41520.1 68415.m05130 DNAJ heat shock N-terminal domain-conta... 31 9.6
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 31 9.6
At1g49890.1 68414.m05593 expressed protein contains Pfam domain,... 31 9.6
At1g47220.1 68414.m05227 cyclin, putative similar to cyclin A-li... 31 9.6
>At1g31480.1 68414.m03854 shoot gravitropism 2 (SGR2) Plant Cell 2002
Jan;14:33-46 PMID:11826297; similar to phospholipase
[Homo sapiens] GI:4760647; identical to cDNA PF02862:
DDHD domain
Length = 933
Score = 130 bits (313), Expect = 1e-29
Identities = 106/354 (29%), Positives = 162/354 (45%), Gaps = 37/354 (10%)
Query: 1844 EVDSKALEEAYLSPDLNEKTLVATDGGRYDVNVVGRLRTAVYWSDKPTNVLRCSWFY-KG 1902
E S+A + L E+ V GG Y+V++V R VYW+ VLR WF KG
Sbjct: 135 ETPSEASVSSSLYEVEEERVGVPVKGGLYEVDLVRRHCFPVYWNGDNRRVLRGHWFARKG 194
Query: 1903 TTDARYVPYSEAVAERLENEYLHAVTTGEWHRKLLLPNN---EMVVMHGPSVMVHFLHSG 1959
D ++P E V+E+LE Y + V W R+ P+ + + G S+ +H L +G
Sbjct: 195 GLD--WLPIPETVSEQLEVAYRNKV----WRRRSFQPSGLFAARIDLQGSSLGLHALFTG 248
Query: 1960 STDGFSAPPLFSFGKRVYRNPPKIKLPPSEPKRVDHLLFLVHGIGEHGCQRKKQSAAIPR 2019
D + A + + PS + + + +GI S +
Sbjct: 249 EDDTWEA---------------WLNVDPSGFSGI--VGYTGNGIKLRRGYAGSYSPKPTQ 291
Query: 2020 VVRRGSDESEIED-TEPSSIDHLLLLCHGVGSACDMRFRSVEEVVDDFRATSLQLVQSHY 2078
R E E++D + HL+ + HG+G + ++ + V +FR + L + H
Sbjct: 292 EELRQQKEEEMDDYCSQVPVRHLVFMVHGIGQKGEKS--NLVDDVGNFRQITAALAERHL 349
Query: 2079 RNSFDNGAVSRIEVLPISWHASLH-SGETGVDKRLAQVTLDSIPKLRSFTNETVLDVLFY 2137
+ + R+ +P W L SGE VDK TLD + + R + TV DVL+Y
Sbjct: 350 TSH--QLSTQRVLFIPCQWRKGLKLSGEAAVDK----CTLDGVRRFREMLSATVHDVLYY 403
Query: 2138 TSPVYCQTIIDTVCKELNRIYGIFLKRNPEFRXXXXXXXXXXXXXILYDLLCHQ 2191
SP+YCQ IID+V K+LNR+Y FLKRNP++ + YD+LCHQ
Sbjct: 404 MSPIYCQAIIDSVSKQLNRLYLKFLKRNPDYVGKISIYGHSLGSVLSYDILCHQ 457
Score = 102 bits (245), Expect = 3e-21
Identities = 65/199 (32%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 2215 VKYPNLDFEPTALYALGSPIAIFECIRGVE---SLGLDF--------ALPTCRKFFNIFH 2263
+KY L+F+ +A+GSP+ +F +R + G D+ +P CR+ FNIFH
Sbjct: 664 IKYQKLEFKVDTFFAVGSPLGVFLALRNIRLGIGKGKDYWEEENAIEEMPACRRMFNIFH 723
Query: 2264 PYDPIAYRIEPLINPGLKNVKPEQIPHHKGRKRMHLELKDTMARVGADLKQ--KFIDSLK 2321
PYDP+AYR+EPL+ +P IP+H+G KR+H+ L+D A ++ DS++
Sbjct: 724 PYDPVAYRVEPLVCKEYLPERPVIIPYHRGGKRLHIGLQDFREDFAARSQRIMNHFDSVR 783
Query: 2322 TTWNKWKPQSTXXXXXXXXXXXXXDQLFDEREDGSSNATR-EMLGKLNEGRRIDYVLQEA 2380
T T ++ DE++D S + E L +G RID++LQE
Sbjct: 784 TR------VLTICQSKSADNLDEMEETDDEKDDRSYGSLMIERLTGTRDG-RIDHMLQEK 836
Query: 2381 PLEVINEYLFAMTSHVGYW 2399
E + YL A+ +H YW
Sbjct: 837 TFE--HPYLQAIGAHTNYW 853
>At5g17160.1 68418.m02010 expressed protein
Length = 569
Score = 36.7 bits (81), Expect = 0.19
Identities = 42/182 (23%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 1050 PLRETNLVESLSADQIPIVGVS--TVPLFGLSTIIADKPKEAGSDSKKIIFELPKTEILN 1107
P + + + +SA + + G +P LS + + +DS KI +L +++
Sbjct: 185 PAKNEDTEQKVSAQEKNLTGSEGEVIPGRDLSVSMEQVWENLKNDSDKIAGDLEVIVVMD 244
Query: 1108 ANNMSLFENFAPPQKNTRDDSESRSDLNMCVTCREVKKP-GKENEMDNLTNQLIGNLTSP 1166
AN + E + T D ES + L E + +E N +Q IG+L
Sbjct: 245 ANTEANKEEM---NEVTADKKESENSLVQVDKEEETLQAICEEGPKKNDNDQEIGDLVIY 301
Query: 1167 IQLSNA--VEVSLVETNATDNREGNVQGAEKTQISAETTGTIPIHSVTENEEKGPREFGW 1224
+ +S+ +E ++ ET+ DN NV +++ ET H++ EN+ + +
Sbjct: 302 VDVSDIPLLESAITETHNDDNESKNVLAIDRSVDQQETE-----HAIQENDAEPETKVNQ 356
Query: 1225 TD 1226
TD
Sbjct: 357 TD 358
>At1g48620.1 68414.m05439 histone H1/H5 family protein weak
similarity to HMG I/Y like protein [Glycine max]
GI:15706274, HMG-I/Y protein HMGa [Triticum aestivum]
GI:20502966; contains Pfam profiles PF00538: linker
histone H1 and H5 family, PF02178: AT hook motif
Length = 479
Score = 36.7 bits (81), Expect = 0.19
Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 4/152 (2%)
Query: 233 AMPPHQPQTSSVPLGPTATEKPYPEPSTGRIQYFT-PDTSVTYQIPEVDVNREPNVCASV 291
A PP QPQTS VP P+ + PY + I PD S I + +
Sbjct: 56 AAPPQQPQTSPVPPHPSISHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYTGIPTAH 115
Query: 292 NALDVKDDVVLTYGDLGPNERVASADIAGPEFPVQSASTPVIPPPPMFTNVKKDTSICKS 351
AL L + + + + P P ++ P + PP V ++ +
Sbjct: 116 GALLTHHLKTLKTSGILVMVKKSYKLASTPPPPPPTSVAPSLEPPRSDFIVNENQPLPDP 175
Query: 352 VL---PPSVARRISSNHPIIKPQAITPSTITN 380
VL P +R P KP + P +TN
Sbjct: 176 VLASSTPQTIKRGRGRPPKAKPDVVQPQPLTN 207
>At5g19190.1 68418.m02285 expressed protein predicted protein,
Arabidopsis thaliana
Length = 154
Score = 36.3 bits (80), Expect = 0.25
Identities = 18/79 (22%), Positives = 31/79 (39%)
Query: 747 YAQNQGSNFEIFVPNIDATSRNPHDMHAYEQPSQYHQNPYSYYQSEGQNYQQQAQTIYSS 806
Y Q Q +F+P R PH + S ++ Q YQQ + S+
Sbjct: 60 YQQEQSKGTGVFIPKSSQPRRRPHHHQKQGRYSSFNAKQQHSLHQNRQEYQQNHENSRST 119
Query: 807 TMLYPGSNLNENISNTSTY 825
+ +N N+++TS +
Sbjct: 120 LTTHNNNNNKSNMNSTSVH 138
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella tertiolecta]
GI:6644464; contains Pfam profile PF00168: C2 domain
Length = 247
Score = 35.9 bits (79), Expect = 0.34
Identities = 17/50 (34%), Positives = 21/50 (42%)
Query: 1379 FTLPPKTSPAITIASYFDTGNYAAETHYRNSFGSPPSAGYPVSTSMRIPP 1428
++ PP SP T Y Y Y G PP++GYP S PP
Sbjct: 151 YSAPPSASPYSTAPPYSGPSLYPQVQQYPQPSGYPPASGYPPQPSAYPPP 200
>At2g33850.1 68415.m04155 expressed protein contains 1 transmembrane
domain; similar to Protein E6 (Swiss-Prot:Q01197)
[Gossypium hirsutum]
Length = 267
Score = 34.7 bits (76), Expect = 0.78
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 663 QSSDRPEFNTSFDLSRQTNEVYEPTKES--------SGFGIIGSLKSKLNSIDINKIQSK 714
Q D E N + + +TNE EP ++ +G+G+ G + N+ ++N + +
Sbjct: 35 QREDPKEQNPNNLVPIETNEKKEPDDQNPAFIPQSENGYGLYGHETTDNNNEELNNNKYE 94
Query: 715 VTTFFDPAYNNEGKIEEETSQTFQDQNTFANHYAQNQGSNFEIFVPNIDATSRNPHDMHA 774
+D +++ S+T Q Q ++ N Y ++ EI+ N D + + +
Sbjct: 95 DNVNYDDSFSTPS-----LSETAQTQESYKN-YKESYPKTTEIYDNNKDTSYYENSNAYG 148
Query: 775 YEQPSQYHQNPYSYYQSEGQNYQQQAQT 802
++ +PY Y ++ +Y + T
Sbjct: 149 TDKRDNDINDPYKGYSNKDTSYYENPNT 176
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 33.9 bits (74), Expect = 1.4
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 1329 SETDENKTEFGKKEMNQDAKESDTFTNRIDKFKKLEETVDHDDIFD-RTSLFTLPPKTSP 1387
+E D +KTE KKE N E++ N ++ K E D+ D RT L TLP ++
Sbjct: 464 TEDDSSKTESEKKEENNRNGETEETQNEQEQTKSALEISHTQDVKDARTDLETLPETSNG 523
Query: 1388 AIT 1390
I+
Sbjct: 524 LIS 526
>At1g78110.1 68414.m09103 expressed protein
Length = 342
Score = 33.9 bits (74), Expect = 1.4
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 1306 DVHSIEQDANKDFPIYEDFLIEPSETDENKTEFGKKEM----NQDAKESDTFTNRIDKFK 1361
DV S + + D E+ ++E E + +KT F K M Q+ K+ D N+ D+ +
Sbjct: 167 DVTSDDDEEEDDDDDEEEEVVEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKR 226
Query: 1362 KLEETVDHDDIFDRTSLFTLPPKTSPA 1388
LE+T + +L + +++PA
Sbjct: 227 DLEDTETEPAVPPPNALLLMRCRSAPA 253
>At5g54650.2 68418.m06805 formin homology 2 domain-containing protein
/ FH2 domain-containing protein contains formin homology
2 domain, Pfam:PF02181
Length = 900
Score = 33.5 bits (73), Expect = 1.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 1760 TDDAVTVLSEEVGREWYTRIGYESKEHIAMKRIHIVDTVDIDADGLIETLLQ 1811
T+D + + E E Y +G E ++ + H+ + +IDADGL T+L+
Sbjct: 704 TEDLLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLK 755
>At5g54650.1 68418.m06804 formin homology 2 domain-containing protein
/ FH2 domain-containing protein contains formin homology
2 domain, Pfam:PF02181
Length = 900
Score = 33.5 bits (73), Expect = 1.8
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 1760 TDDAVTVLSEEVGREWYTRIGYESKEHIAMKRIHIVDTVDIDADGLIETLLQ 1811
T+D + + E E Y +G E ++ + H+ + +IDADGL T+L+
Sbjct: 704 TEDLLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLK 755
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 33.5 bits (73), Expect = 1.8
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 1007 ESQKVIKDAFNDDEQFDFDSLIKPIDKLIDDPFDDLEKEEEIIPLRE-TNL 1056
E ++ IK +D+Q + ++ + K++++PFD+ + E+ + +R TNL
Sbjct: 430 EKEREIKKNLFEDQQQQLEGNVEKLSKILEEPFDEYDHEKVVEMMRHLTNL 480
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 32.7 bits (71), Expect = 3.1
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 568 PTDSLQTPPEPPKAIGNVNFRLNKKRPQYYSGPVEGIGAISNNIKPVIAPVDANIFQGAL 627
P S+ PP P + N N K P P+E +I PV +P +I +
Sbjct: 163 PIPSVALPPPTPSNVPPRNASNNHKPP-----PIE------KSIAPVASPPTISI---DI 208
Query: 628 FTPTHPADPHLTLAQQPFDINTPANPAP 655
P HP P LT + P +TP +P
Sbjct: 209 APPVHPVIPKLTPSSSPVPTSTPTKGSP 236
>At5g55020.1 68418.m06853 myb family transcription factor (MYB120)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 523
Score = 32.7 bits (71), Expect = 3.1
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 768 NPHDMHAYEQPSQYHQNPYSYYQSEGQNY---QQQAQTIYSSTMLYPGSNLNENISNTST 824
+PH H +Q +H + + Q Q Y Q + SS+ L + N S++ T
Sbjct: 148 HPHPHHQQQQQHNHHHHHHQQQQQHQQMYFQPQSSQRNTPSSSPLPSPTPANAKSSSSFT 207
Query: 825 YHTPGFNITTETAHTTPH 842
+HT N+ + TP+
Sbjct: 208 FHTTTANLLHPLSPHTPN 225
>At2g28290.2 68415.m03434 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3529
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/85 (21%), Positives = 34/85 (40%)
Query: 599 GPVEGIGAISNNIKPVIAPVDANIFQGALFTPTHPADPHLTLAQQPFDINTPANPAPFDI 658
GPV+ A+S+ +P + + T P+D L ++ QP D P + P
Sbjct: 1690 GPVQNQNAVSSVCDGSKSPSEGRTYTALQGVTTAPSDATLPMSSQPSDATLPMSSQPVGS 1749
Query: 659 SHPQQSSDRPEFNTSFDLSRQTNEV 683
+ Q ++ P + R+ +
Sbjct: 1750 TVEAQEANVPSLPAALPAKRRVRNL 1774
>At2g28290.1 68415.m03433 chromatin remodeling protein, putative (SYD)
similar to transcriptional activator HBRM [Homo sapiens]
GI:414117; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain; identical to cDNA putative chromatin
remodeling protein SYD (SPLAYED) GI:13603720
Length = 3574
Score = 32.7 bits (71), Expect = 3.1
Identities = 18/85 (21%), Positives = 34/85 (40%)
Query: 599 GPVEGIGAISNNIKPVIAPVDANIFQGALFTPTHPADPHLTLAQQPFDINTPANPAPFDI 658
GPV+ A+S+ +P + + T P+D L ++ QP D P + P
Sbjct: 1690 GPVQNQNAVSSVCDGSKSPSEGRTYTALQGVTTAPSDATLPMSSQPSDATLPMSSQPVGS 1749
Query: 659 SHPQQSSDRPEFNTSFDLSRQTNEV 683
+ Q ++ P + R+ +
Sbjct: 1750 TVEAQEANVPSLPAALPAKRRVRNL 1774
>At1g30280.1 68414.m03703 expressed protein contains low similarity to
cyclin G-associated kinase GI:1902912 SP|P97874 from
[Rattus norvegicus]
Length = 455
Score = 32.7 bits (71), Expect = 3.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 1556 SSPEVSRAEPGTFNRLASYFASPPASDPSKSFFELSQSQN 1595
+SPE +P +F R+ Y S PAS P SF + N
Sbjct: 214 ASPETISLDPNSFRRMDDYGPSSPASSPVSSFICEEEDDN 253
>At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related protein
2 (PCAT2) contains Pfam domains PF02135: TAZ zinc finger
and PF00569: Zinc finger, ZZ type; identical to cDNA
p300/CBP acetyltransferase-related protein 2
GI:12597460
Length = 1691
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 776 EQPSQYHQNPYSYYQSEGQNYQQQAQTIYSSTMLYPGSNLNENISNTSTYHTPGFNITTE 835
+QP+Q+HQ + + Q Q Q + S + +N+ ++ T H PG +E
Sbjct: 406 QQPNQFHQQQQQFLHQQQLKQQSQQQQRFISHDAFGQNNVASDMV-THVKHEPGMENPSE 464
Query: 836 TAHT-TP 841
+ H+ TP
Sbjct: 465 SIHSQTP 471
>At5g55660.1 68418.m06940 expressed protein similar to unknown protein
(pir||T08929)
Length = 778
Score = 31.9 bits (69), Expect = 5.5
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 1260 DKVPSVSEDLKTEFENTKENQGPRCPEIPTAPPAEEDSTSEGTGGLDVHSIEQDANKDFP 1319
DK V E K E + ++++ E A AEE+ T++G +V ++ANK+
Sbjct: 172 DKGDDVDEAEKVENVD-EDDKEEALKEKNEAELAEEEETNKGE---EV----KEANKEDD 223
Query: 1320 IYEDFLIEPSETDENKTEF-GKKEMNQDAKESDTFTNRIDKFKKLEETVDHD 1370
+ D + E ++ KTE + E ++ KE + + DK + EE+ D D
Sbjct: 224 VEADTKVAEPEVEDKKTESKDENEDKEEEKEDEKEESMDDKEDEKEESNDDD 275
>At4g09830.1 68417.m01612 expressed protein
Length = 191
Score = 31.9 bits (69), Expect = 5.5
Identities = 15/60 (25%), Positives = 28/60 (46%)
Query: 836 TAHTTPHAIITDSNIKFPALVPSKENFDINQNTEIAIKNSELKTEQLQNLPTYNVPQLGH 895
T H T ++T S FP VP + + ++ ++ L + ++L Y +PQ G+
Sbjct: 102 TMHVTNPGLMTTSGTSFPTAVPVVRSEQCENQAKNSVFSNALSSPIRRSLQNYQIPQGGY 161
>At3g27720.1 68416.m03461 zinc finger protein-related contains
Pfam:PF01485 IBR domain
Length = 493
Score = 31.9 bits (69), Expect = 5.5
Identities = 14/51 (27%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 1007 ESQKVIKDAFNDDEQFDFDSLIKPIDKLIDDPFDDLEKEEEIIPLRE-TNL 1056
E + + K+ F D +Q + ++ + K++++PFD+ + E+ + +R TNL
Sbjct: 391 EERNIKKNLFEDQQQ-QLEGNVERLSKILEEPFDEYDHEKVVEMMRHLTNL 440
>At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 526
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/79 (25%), Positives = 31/79 (39%)
Query: 1274 ENTKENQGPRCPEIPTAPPAEEDSTSEGTGGLDVHSIEQDANKDFPIYEDFLIEPSETDE 1333
E+ + P C E P+A P + S+G G + +D + SE E
Sbjct: 304 EDVENKSKPVCHEQPSATPESDAKGSDGAGDRKQVDRSSCGSNTPSSSDDVEADASERQE 363
Query: 1334 NKTEFGKKEMNQDAKESDT 1352
+ T KE N+D + T
Sbjct: 364 DGTNGEVKETNEDTNKPQT 382
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 31.9 bits (69), Expect = 5.5
Identities = 20/79 (25%), Positives = 31/79 (39%)
Query: 1274 ENTKENQGPRCPEIPTAPPAEEDSTSEGTGGLDVHSIEQDANKDFPIYEDFLIEPSETDE 1333
E+ + P C E P+A P + S+G G + +D + SE E
Sbjct: 386 EDVENKSKPVCHEQPSATPESDAKGSDGAGDRKQVDRSSCGSNTPSSSDDVEADASERQE 445
Query: 1334 NKTEFGKKEMNQDAKESDT 1352
+ T KE N+D + T
Sbjct: 446 DGTNGEVKETNEDTNKPQT 464
>At5g27160.1 68418.m03241 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 702
Score = 31.5 bits (68), Expect = 7.2
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 1260 DKVPSVSEDLKTEFENTKENQGPRCPEIPTAPPAEEDSTSEGTGGLDVHSIEQDANK--- 1316
+ VP + + ++ KE+ G PE E D TGG++ H +E D +
Sbjct: 508 ESVPPFEKKVHSDVNKEKEDGGKNEPEAVETDGVETDGVE--TGGVETHDVETDGVEPEG 565
Query: 1317 ---DFPIYEDFLIEPSETDENKTE 1337
+F E F+ E E D+ +T+
Sbjct: 566 FVPEFVELEGFVPEFVEPDDVETD 589
>At5g13970.1 68418.m01633 expressed protein
Length = 404
Score = 31.5 bits (68), Expect = 7.2
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 19/159 (11%)
Query: 952 DSTAEKLLQGSFPTKLESLFKVNEDLPVAASIFRSPVEGNLEPA-PIGF--------KTS 1002
DS + K ++ S K +L + + D + AS SP E +E P G K +
Sbjct: 234 DSKSPKRVRFSSDVKDRTLTEGDNDSVMEAS---SPNEDKVEAVYPTGIPDYMRNPSKYT 290
Query: 1003 QNTIESQKVIKDAFNDDEQFDFDSLIKPIDKLIDDPFDDLEKEEEIIPLRE---TNLVES 1059
+ T ES +V +++ N DF ++I+ D+ + DP +L + +P R+ + VE+
Sbjct: 291 RYTFESGEVDEES-NRKAYMDFLNMIRSKDESLVDPLMELPRSVAFVPKRKPMAESKVEN 349
Query: 1060 LSAD---QIPIVGVSTVPLFGLSTIIADKPKEAGSDSKK 1095
+ D + + V T+ +S + D+P+ A +K+
Sbjct: 350 IDKDCEGRRVAIAVDTIEDCTISAMEEDEPETAQHVTKR 388
>At1g22335.1 68414.m02794 expressed protein ; expression supported
by MPSS
Length = 139
Score = 31.5 bits (68), Expect = 7.2
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Query: 777 QPSQYHQNPYSYYQSEGQNYQQQAQ-TIYSSTMLYPGSNLNENISNTSTYHTPGFNITTE 835
+P +HQ Y Y+ + Q QQQ + SS ++YP + SN T P +++
Sbjct: 47 RPYLHHQQHYQYHHHQQQQQQQQQRLPSASSYLIYPSNVEAPTPSNVPTSQGP---LSSS 103
Query: 836 TAHTTPHAIITDSNIKFPALVPSKENFDINQNT 868
T P + + P P +I T
Sbjct: 104 TESHAPQQVSEEGGEFDPTDAPESTTTNIRDLT 136
>At1g07310.1 68414.m00778 C2 domain-containing protein contains
similarity to shock protein SRC2 [Glycine max]
gi|2055230|dbj|BAA19769 ; contains Pfam profile
PF00168:C2 domain
Length = 352
Score = 31.5 bits (68), Expect = 7.2
Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 15/135 (11%)
Query: 1534 DIKISELQIPETKPLPDPMNFFSSPEVSRAEPGTFNRLASYFASPPASDPSKSFFELSQS 1593
D I Q P +P P++++S+P+ + Y SPP P ++
Sbjct: 137 DRPIPPPQHPPPRPQSQPLDYYSAPQGNHY----------YSPSPPPPPPPQAPITAPSP 186
Query: 1594 QNHYRHANDGPEDSSRFAYQNHRFDNNVMNSEKQKATFDLIKDLTSTRYIPNEQIVRTVN 1653
Q YR + P S +A+ +H + ++ + D S +P+
Sbjct: 187 QRDYREFSQSPSPSP-YAFTDHYYSGYYYPPPPPRSMY----DRASNYGLPSGPSAPVDA 241
Query: 1654 YFTIEYDDPNISRPR 1668
+ +I++ P ++ PR
Sbjct: 242 FSSIDHKQPPLAPPR 256
>At4g33390.1 68417.m04746 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 779
Score = 31.1 bits (67), Expect = 9.6
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 1267 EDLKT----EFENTKENQGPRCPEI--PTAPPAEEDSTSEGTGGLDVHSIEQDANKDFPI 1320
EDLKT +N G PE+ P A P E ++ E G + E+D+ ++ I
Sbjct: 2 EDLKTTDALSLPVVSDNGGIIEPELQLPQAIPTELENNEEENGTIQQSQSEEDSAENGKI 61
Query: 1321 YEDFLIEPSETDENKTE 1337
Y D PS++ +T+
Sbjct: 62 YMDDTFLPSKSQVKETQ 78
>At4g18150.1 68417.m02697 hypothetical protein
Length = 762
Score = 31.1 bits (67), Expect = 9.6
Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 9/149 (6%)
Query: 655 PFDISHPQQSSDRPEFNTSFDLSRQ--TNEVYEPTKESSGFGIIGSLKSKLNSIDINKIQ 712
PF +S QQ + D+ Q T P S +G G S N+ +N
Sbjct: 580 PFMLSAFQQVFPTGNHQSLVDMLMQYKTQTTAPPVPPPSAYGFGGGAVSS-NNFPLNP-- 636
Query: 713 SKVTTFFDPAYNNEGKIEEETSQTFQDQNTFANHYAQNQGSNFEIFVPNIDATSRNPHDM 772
+ ++ +++ + + Q QN + Q Q +N + VP S +
Sbjct: 637 TSAANSYEDVLSSQFNESNHLASSLQQQNEKTTAWHQGQQANSRV-VPGSGYYS---YPG 692
Query: 773 HAYEQPSQYHQNPYSYYQSEGQNYQQQAQ 801
H +QP + Q +Q + QQQ Q
Sbjct: 693 HQNQQPPGFRQAQQLQHQQQSSQQQQQQQ 721
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 31.1 bits (67), Expect = 9.6
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 9/57 (15%)
Query: 782 HQNPY----SYYQSEGQNYQQQAQTIYSSTML-----YPGSNLNENISNTSTYHTPG 829
HQ PY Y +G YQQQ S ++ YPGSN N N N+ PG
Sbjct: 217 HQMPYYAGNGYATGKGDQYQQQQYNNQSDHVMNLSQQYPGSNGNNNWMNSPPPPPPG 273
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 31.1 bits (67), Expect = 9.6
Identities = 69/354 (19%), Positives = 132/354 (37%), Gaps = 21/354 (5%)
Query: 1026 SLIKPIDKLIDDPFDDLEKEEEIIPLRET-NLVESLSADQIPIVGVSTVPLFGLSTIIAD 1084
S+ KP+ K D +DL+ + +E ++V+ A++ V + + +
Sbjct: 17 SMTKPLKKGKRDAEEDLDMQVTKKQKKELIDVVQKEKAEKTVPKKVESSSSDASDSDEEE 76
Query: 1085 KPKEAGSDSKKIIFELPKTEILNANNMSLFENFAPPQKNTRDDSESRSDLNMCVTCREVK 1144
K KE S K + + + ++ + P K + +S S D + T E
Sbjct: 77 KTKETPSKLKDESSSEEEDDSSSDEEIAPAKKRPEPIKKAKVESSSSDDDS---TSDEET 133
Query: 1145 KPGKENEMDNLTNQLIGNLTSPIQLSNAVEVSLVETNATDNREGNVQGAEKTQISAETTG 1204
P K+ L + + +S S+ E V+ + ++ + S+
Sbjct: 134 APVKKQPAV-LEKAKVESSSSDDDSSSDEETVPVKKQPAVLEKAKIESSSSDDDSSSDEE 192
Query: 1205 TIPIHSVTENEEKGPREFGWTDKTEFSAQQP---EDHDYTFKLDPNSIGFFGNNSLFFDK 1261
T+P+ T EK E +D S ++P + K D + + K
Sbjct: 193 TVPMKKQTAVLEKAKAESSSSDDGSSSDEEPTPAKKEPIVVKKDSSDESSSDEETPVVKK 252
Query: 1262 VPS-VSEDLKTEFENTKENQG----PRCPEIPTA-----PPAEEDSTSEGTGGLDVHSIE 1311
P+ V +D K E +++E P + PT P A++ S+SE + E
Sbjct: 253 KPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKNAKPAAKDSSSSEEDSDEEESDDE 312
Query: 1312 QDANKDFPIYEDFLIEPSETDENKTEFGKKEMNQD---AKESDTFTNRIDKFKK 1362
+ K + + S +DE+ E K+E + K+ D+ +D +K
Sbjct: 313 KPPTKKAKVSSKTSKQESSSDESSDESDKEESKDEKVTPKKKDSDVEMVDAEQK 366
>At2g41520.2 68415.m05131 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1077
Score = 31.1 bits (67), Expect = 9.6
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 475 EGIVCDDTLNQPTTTNLSLQPDLISSVTMHIPPTTIPSANPMSTGQHVIKKSETHFDPTN 534
EGI + LN P + T + PT P A P + +H+ +S F +
Sbjct: 408 EGIEAQEKLNSPGYCSPMDYSPYQGDKTSNQFPTETPLA-PSHSREHIDSRSSNDFKVAS 466
Query: 535 IGQTSMDSAVQNASAFVPSTSIPLFLNQQT 564
+S+ +A + S +P+ S +Q+T
Sbjct: 467 ARDSSLFTAEDHGSTCIPNFSFSASTSQET 496
>At2g41520.1 68415.m05130 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profiles
PF00226: DnaJ domain, PF00515: TPR Domain
Length = 1108
Score = 31.1 bits (67), Expect = 9.6
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Query: 475 EGIVCDDTLNQPTTTNLSLQPDLISSVTMHIPPTTIPSANPMSTGQHVIKKSETHFDPTN 534
EGI + LN P + T + PT P A P + +H+ +S F +
Sbjct: 408 EGIEAQEKLNSPGYCSPMDYSPYQGDKTSNQFPTETPLA-PSHSREHIDSRSSNDFKVAS 466
Query: 535 IGQTSMDSAVQNASAFVPSTSIPLFLNQQT 564
+S+ +A + S +P+ S +Q+T
Sbjct: 467 ARDSSLFTAEDHGSTCIPNFSFSASTSQET 496
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 31.1 bits (67), Expect = 9.6
Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 858 SKENFDINQNTEIAIKNSELKTEQLQNLPTYN---VPQLGHYNKEIPSSIEELTRTAPQK 914
+ EN ++N+ E+A + ++L+++ +L K+ S++EE+ R QK
Sbjct: 180 TSENKELNEKLEVAGETESDLNQKLEDVKKERDGLEAELASKAKDHESTLEEVNRLQGQK 239
Query: 915 NDNVKTADIDKMYPILAVKDFFDIPQPSQLFNPIASTDSTAEKLLQGSFPTKLESLFKVN 974
N+ + +K + D+ + +T S K + G F + ++ K+
Sbjct: 240 NETEAELEREKQEKPALLNQINDVQKALLEQEAAYNTLSQEHKQINGLFEEREATIKKLT 299
Query: 975 ED 976
+D
Sbjct: 300 DD 301
>At1g49890.1 68414.m05593 expressed protein contains Pfam domain,
PF04484: Family of unknown function (DUF566)
Length = 659
Score = 31.1 bits (67), Expect = 9.6
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 507 PTTIPSANPMSTGQHVIKKSETHFDPTNIGQTSMDSAVQNASAFVPSTSIPLFLNQQTAN 566
P+ S +P + + T T+ +S SA+ S PS S PL L++ T N
Sbjct: 37 PSRYLSPSPSHSVSSTTTTTTTTTTTTSSSSSSSSSAILRTSKRYPSPS-PL-LSRSTTN 94
Query: 567 VPTDSLQTPPEPPKAIGNVNFR 588
++S++TP PK +V+ R
Sbjct: 95 SASNSIKTPSLLPKRSQSVDRR 116
>At1g47220.1 68414.m05227 cyclin, putative similar to cyclin A-like
protein [Nicotiana tabacum] GI:1064931, A-type cyclin
[Catharanthus roseus] GI:2190259; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 327
Score = 31.1 bits (67), Expect = 9.6
Identities = 17/61 (27%), Positives = 25/61 (40%)
Query: 2186 DLLCHQTAKVSRSTEKVFVVGSAGTGQSSVKYPNLDFEPTALYALGSPIAIFECIRGVES 2245
D+L ++ R T F+ Q K PNL EP Y + + C++ V S
Sbjct: 178 DILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNLQLEPLCCYLSELSMLDYSCVKFVPS 237
Query: 2246 L 2246
L
Sbjct: 238 L 238
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.131 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,923,212
Number of Sequences: 28952
Number of extensions: 2647011
Number of successful extensions: 6309
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 6254
Number of HSP's gapped (non-prelim): 78
length of query: 2399
length of database: 12,070,560
effective HSP length: 93
effective length of query: 2306
effective length of database: 9,378,024
effective search space: 21625723344
effective search space used: 21625723344
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 67 (31.1 bits)
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