GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001645-TA|BGIBMGA001645-PA|undefined
         (271 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 174 YYILPDVDPSVGVEIT 189
           +YILPD+D   G  +T
Sbjct: 186 FYILPDLDVVKGAMLT 201


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 174 YYILPDVDPSVGVEIT 189
           +YILPD+D   G  +T
Sbjct: 186 FYILPDLDVVKGAMLT 201


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 174 YYILPDVDPSVGVEIT 189
           +YILPD+D   G  +T
Sbjct: 186 FYILPDLDVVKGAMLT 201


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 174 YYILPDVDPSVGVEIT 189
           +YILPD+D   G  +T
Sbjct: 186 FYILPDLDVVKGAMLT 201


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 30  LGYLSLKNLQRKQLWVVKVETDKA 53
           L Y  + N  R Q W+V  +T  A
Sbjct: 904 LAYYEICNRIRNQRWIVNRDTSGA 927


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.129    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,949
Number of Sequences: 317
Number of extensions: 2132
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 271
length of database: 114,650
effective HSP length: 56
effective length of query: 215
effective length of database: 96,898
effective search space: 20833070
effective search space used: 20833070
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 42 (21.0 bits)