BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001645-TA|BGIBMGA001645-PA|undefined (271 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosacc... 27 2.9 SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr 1|... 27 2.9 SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 3.8 SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 26 6.6 >SPAC26H5.06 |pot1||telomere end-binding protein Pot1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 555 Score = 27.1 bits (57), Expect = 2.9 Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 6/89 (6%) Query: 2 DHNYSVEPQNKENPDNISRLNVRQLVDTLGYLSL----KNLQRKQLWVVKVETDKAEASI 57 +H++ KE D + NVR +D LGYL + +R + + KV++++ E + Sbjct: 270 EHDFYCRNYIKEG-DYVVMKNVRTKIDHLGYLECILHGDSAKRYNMSIEKVDSEEPELNE 328 Query: 58 TQSEQVITKMQDSKQTIEIIPQTSTSADQ 86 +S + + +Q+ + IE + + + + Q Sbjct: 329 IKSRKRL-YVQNCQNGIEAVIEKLSQSQQ 356 >SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr 1|||Manual Length = 376 Score = 27.1 bits (57), Expect = 2.9 Identities = 9/13 (69%), Positives = 11/13 (84%) Query: 241 DWVIENAISYDND 253 DW++ENAI YD D Sbjct: 245 DWIVENAIYYDAD 257 >SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1727 Score = 26.6 bits (56), Expect = 3.8 Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 4/102 (3%) Query: 2 DHNYSVEPQNKENPDNISRLNVRQLVDTLGY-LSLKNLQRKQLWVVKVETDKAEASITQS 60 + N S+ + N + I+ L R+ ++TL L+ L ++QL +++T+KA ++ Sbjct: 1237 ESNKSLRENLERNEEVITEL--REKIETLKTDLANFRLNKEQL-ESQLQTEKAAVKKLEN 1293 Query: 61 EQVITKMQDSKQTIEIIPQTSTSADQPASEVLQIMDENAIPE 102 K + + + + TSTS+D + + EN I E Sbjct: 1294 SNEEYKRHNQEILLSLNSSTSTSSDASRLKNELVSKENLIEE 1335 >SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schizosaccharomyces pombe|chr 1|||Manual Length = 666 Score = 25.8 bits (54), Expect = 6.6 Identities = 13/57 (22%), Positives = 27/57 (47%) Query: 48 VETDKAEASITQSEQVITKMQDSKQTIEIIPQTSTSADQPASEVLQIMDENAIPENF 104 +E ++ E S+ + Q +TK+ Q + STS ++ L+ D++ + F Sbjct: 425 MEGEEQEPSLAERLQNLTKLDQQAQALSTQISASTSLSTVLTQALKTNDQSLLESCF 481 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.310 0.129 0.364 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,190,985 Number of Sequences: 5004 Number of extensions: 45312 Number of successful extensions: 96 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 94 Number of HSP's gapped (non-prelim): 4 length of query: 271 length of database: 2,362,478 effective HSP length: 72 effective length of query: 199 effective length of database: 2,002,190 effective search space: 398435810 effective search space used: 398435810 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.7 bits) S2: 53 (25.4 bits)
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