GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001644-TA|BGIBMGA001644-PA|IPR006630|RNA-binding protein
Lupus La, IPR006607|Protein of unknown function DM15
         (1490 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    29   0.69 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    29   0.69 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    29   0.91 
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    29   1.2  
AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein pro...    28   2.1  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    28   2.1  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    27   4.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   4.9  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    27   4.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   4.9  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    26   6.4  
DQ212027-1|ABB00972.1|  102|Anopheles gambiae defensin protein.        26   6.4  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    26   6.4  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   6.4  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    26   6.4  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 29.5 bits (63), Expect = 0.69
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 1048 QARRQQDNGS-QPGEQPGGRPRSAAHSPQAEGGAADWTEVKRRTKAGSRERSAAGGPATD 1106
            QA    D G+  P E  G R R +   P +  GAA  T       A +   S  GG    
Sbjct: 1140 QAAAGSDGGAGSPAELSGNRERRSPSIPNSNAGAATPTATTAAPLAPTTGNSKGGGGVVQ 1199

Query: 1107 GE 1108
            G+
Sbjct: 1200 GD 1201


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
            binding protein protein.
          Length = 838

 Score = 29.5 bits (63), Expect = 0.69
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 6/56 (10%)

Query: 1025 RTSRPG-PTPPHDS-LDPNVPEFVPQARRQQDNGSQPGEQPGGRPRSAAHSPQAEG 1078
            RT  P  P PP    + P  P      R Q   G+ PG QPG +PR     P A+G
Sbjct: 202  RTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPR----PPSAQG 253


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 29.1 bits (62), Expect = 0.91
 Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 78   QEQERKPLEEHHQHPQNQAK-VDKPEPLQNHHGSNDKH 114
            Q+Q+++  ++H QH Q+Q +   +P+  Q+ H S+  H
Sbjct: 1312 QQQQQQQQQQHQQHQQHQLQHHHQPQLSQSSHHSSSSH 1349


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
            protein.
          Length = 541

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 34/145 (23%), Positives = 50/145 (34%), Gaps = 9/145 (6%)

Query: 973  LQTEGTEERPGEKRRKKQMVGIFPLATMGGPLVAPVSGLLRAVXXXXXXRMFRTSRPGPT 1032
            LQ E  E +  E++ K QM  +         L+   + LL A              P P 
Sbjct: 128  LQEEKEEAKRREEKLKAQMEKLAAAHQRDRNLL---NSLLAAKVAGGQPSASSRQPPTPL 184

Query: 1033 PPHDSLDPNVPEFVPQARRQQDNGSQPGEQPGGRPRSAAHSPQAEGGAADWTEVKRRTKA 1092
            P   S  P       Q ++QQ    Q  EQP      A   P++E   A   +V      
Sbjct: 185  PRRSSAQPQ------QQQQQQQRNQQEQEQPRASTSHAVMLPRSEASTAVRGDVVPELTF 238

Query: 1093 GSRERSAAGGPATDGEVPDEEPREE 1117
                R    G AT      ++P+++
Sbjct: 239  SEVVRRRYRGKATGKPRSQQQPQQQ 263


>AF457546-1|AAL68776.1|  182|Anopheles gambiae 30 kDa protein
           protein.
          Length = 182

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 350 SDVESELFDSDGE--LLDTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDCE 402
           SD E++   +DGE    DT+   +G+D    + +   EE    D+    +D + E
Sbjct: 75  SDAEADAGAADGEEGATDTESGAEGDDSEMDSAMKEGEEGAGSDDAVSGADDETE 129


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
            protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 2.1
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 1068 RSAAHSPQAEGG-AADWTEVKRRTKAGSRERSAAGGPATDGEVPDEEPRE 1116
            ++ A +PQA    AA  +  K++ K+ SR  SAA    T   V D+ PR+
Sbjct: 67   KTVAPTPQAASHTAAGNSGQKKKKKSRSRFLSAATPAPTHANVEDQHPRD 116


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
            protein.
          Length = 753

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 1386 FRFYSYGLERKFRPELYQHFQTETMADY 1413
            FRFY Y  E  F+P  Y  F      D+
Sbjct: 538  FRFYLYRPEELFQPNTYNRFLVAPTGDH 565


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 419 SEDEDGSNVPNQQTEIAADGTIWTRI--EEGGVVGRLPIHSAFKDVHGPTAHAKRNIMKG 476
           SE +  SN    QT       +  RI  E GGV+G L    A +     T  A+RN MK 
Sbjct: 263 SEQKIESNCATAQTLEQEAKELQERIDTEGGGVLGELEQQLAVESKKEATVAAERNTMKD 322

Query: 477 NL 478
           ++
Sbjct: 323 SI 324


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 365 DTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDCENMPNK 407
           DT      +D++S++  SS     DE +   SS+SD +++ ++
Sbjct: 448 DTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSE 490


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query: 365 DTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDCENMPNK 407
           DT      +D++S++  SS     DE +   SS+SD +++ ++
Sbjct: 448 DTSSDSSSSDDSSSSSSSSSSSESDEHDFYSSSESDSDSLSSE 490


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 6/35 (17%)

Query: 81  ERKPLEEHHQHPQNQAKVDKPEPLQNHHGSNDKHQ 115
           +R P   HHQ  QN  +      + +HH    +HQ
Sbjct: 22  QRSPFHHHHQQQQNHQR------MPHHHQQQQQHQ 50


>DQ212027-1|ABB00972.1|  102|Anopheles gambiae defensin protein.
          Length = 102

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 1091 KAGSRERSAAGGPATDGEVPDEEPREELHFQLD 1123
            +A  +E +A GG A    + DE P E LH  L+
Sbjct: 24   QAAPQEEAALGGGANLNTLLDELPEETLHAALE 56


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
            protein.
          Length = 755

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 1386 FRFYSYGLERKFRPELYQHFQTETMADY 1413
            FRFY Y +E  F P  Y  F      D+
Sbjct: 538  FRFYFYRVEELFTPNTYNKFLVAPGGDH 565


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 339  FRNATNIPQDCSDVESELFDSDGELLDTQIAPQGNDENSANILSSDEEVLDEDNINQSSD 398
            F N  N+P    +V +EL +++   +   +  Q  DE +AN+ ++ E  +  +  NQ+ D
Sbjct: 1297 FGNNDNLP-GVEEVAAELENANESEVAANVENQREDEVAANVENAKENEVAANVENQNED 1355


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcription
            factor protein.
          Length = 593

 Score = 26.2 bits (55), Expect = 6.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 1465 TISNAEQWRVQQIPYYNTEG 1484
            T+S   +W VQ +PY+  +G
Sbjct: 138  TLSQIYEWMVQNVPYFKDKG 157


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.133    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,521,177
Number of Sequences: 2123
Number of extensions: 62693
Number of successful extensions: 205
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 188
Number of HSP's gapped (non-prelim): 27
length of query: 1490
length of database: 516,269
effective HSP length: 73
effective length of query: 1417
effective length of database: 361,290
effective search space: 511947930
effective search space used: 511947930
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)