Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001644-TA|BGIBMGA001644-PA|IPR006630|RNA-binding protein
Lupus La, IPR006607|Protein of unknown function DM15
(1490 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 217 4e-56
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 217 4e-56
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 62 3e-09
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 62 3e-09
AF003140-7|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 48 4e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 37 0.095
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 37 0.095
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 36 0.22
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 36 0.22
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 36 0.22
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 36 0.29
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 36 0.29
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 35 0.51
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 35 0.51
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 35 0.51
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 33 1.5
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 33 1.5
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 33 1.5
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 33 2.0
AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical ... 32 2.7
U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical pr... 31 4.7
AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 4.7
Z81586-12|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 31 6.2
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 31 6.2
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 31 6.2
Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical pr... 31 6.2
Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical pr... 31 6.2
Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical pr... 31 6.2
U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein. 31 6.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 6.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 6.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 6.2
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 31 8.2
Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical pr... 31 8.2
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 31 8.2
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 31 8.2
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 31 8.2
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 31 8.2
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 31 8.2
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 31 8.2
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 31 8.2
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 31 8.2
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 31 8.2
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding la
related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 217 bits (531), Expect = 4e-56
Identities = 117/239 (48%), Positives = 151/239 (63%), Gaps = 15/239 (6%)
Query: 1221 KASRPRRTARFYAASKDPHATDVICSRKHKTRYSLNPPVEHHVGWIMDVREHRPRTQSTG 1280
+ S ++ RFY SK D RK KTR+S PPVE V W++ RE
Sbjct: 619 RESEEQKMNRFYPISKPTAPLDAKSPRKKKTRHSEKPPVEMPVAWVLG-RE--------- 668
Query: 1281 SSLGASPTLGSSCGSMPQSLPTFHHPSHGLLRENHFTQQAYHKYHSRCLKERKKLGIGQS 1340
+L A+P +G + S +P +HPS LL+E+ F Q Y + CLK+RK LG
Sbjct: 669 DALPAAP-IGIAASS--SQVPA-NHPSISLLQEDRFVQNVYSTWRQACLKQRKSLGY-DC 723
Query: 1341 QEMNTLFRFWSFFLRDHFNRTMYNEFRSLAIEDAQAGFRYGLECLFRFYSYGLERKFRPE 1400
EMNTL+RFWSFFLRD+FNR MY EFR LA+EDA+ G RYG+E LFRFYSYGLE+KFRPE
Sbjct: 724 AEMNTLYRFWSFFLRDNFNRNMYEEFRKLALEDAEIGSRYGIEALFRFYSYGLEKKFRPE 783
Query: 1401 LYQHFQTETMADYEKGQLYGLEKFWAFLKYYKHASALQVEPKLQGYLSKFKSIEDFRVL 1459
+Y++F + D +KG+LYGLEK +AFL+ K A L V+ L L+K+KS +DFR L
Sbjct: 784 IYKNFMKDVTTDVQKGELYGLEKLFAFLQRSKIAKQLVVDDYLTKELNKYKSTDDFRNL 842
Score = 99.5 bits (237), Expect = 2e-20
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 188 YSRLLCEYYFSPDNLARDFFLRRKMSPDGTIPVTLIASFHRVRALTSDVQLVLDAIRDSE 247
Y R EYYFS +NL +DFFLRRKM P+G +PV LIASF RVR+LT D L+L+A++DS
Sbjct: 326 YVRKQIEYYFSEENLQKDFFLRRKMGPEGYLPVALIASFPRVRSLTEDYSLILEALKDST 385
Query: 248 RLELI-SGFKVRTVFEPTKWPILDVATSSD 276
++++ G ++R PT WP++ + +D
Sbjct: 386 KVDMSPDGLQIRAPVNPTIWPLMPTVSGAD 415
Score = 41.5 bits (93), Expect = 0.004
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 1130 PPRHNTFTDAWSDEESDAEFTDGDVGRLLIVTQTTRAAKHDGHDRQGDWTSRTKITQDLE 1189
P R A+ E D + +L+I+T + R DR GD+++R++ +
Sbjct: 474 PKRPEKSKKAFLSAIDSEEIGDDVISKLIIMTPSRRTL-----DRTGDFSTRSQNQGEFN 528
Query: 1190 QVITDGLRRYEEDLW 1204
+ + GLRRYEE+LW
Sbjct: 529 EEVEIGLRRYEEELW 543
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding la
related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 217 bits (531), Expect = 4e-56
Identities = 117/239 (48%), Positives = 151/239 (63%), Gaps = 15/239 (6%)
Query: 1221 KASRPRRTARFYAASKDPHATDVICSRKHKTRYSLNPPVEHHVGWIMDVREHRPRTQSTG 1280
+ S ++ RFY SK D RK KTR+S PPVE V W++ RE
Sbjct: 816 RESEEQKMNRFYPISKPTAPLDAKSPRKKKTRHSEKPPVEMPVAWVLG-RE--------- 865
Query: 1281 SSLGASPTLGSSCGSMPQSLPTFHHPSHGLLRENHFTQQAYHKYHSRCLKERKKLGIGQS 1340
+L A+P +G + S +P +HPS LL+E+ F Q Y + CLK+RK LG
Sbjct: 866 DALPAAP-IGIAASS--SQVPA-NHPSISLLQEDRFVQNVYSTWRQACLKQRKSLGY-DC 920
Query: 1341 QEMNTLFRFWSFFLRDHFNRTMYNEFRSLAIEDAQAGFRYGLECLFRFYSYGLERKFRPE 1400
EMNTL+RFWSFFLRD+FNR MY EFR LA+EDA+ G RYG+E LFRFYSYGLE+KFRPE
Sbjct: 921 AEMNTLYRFWSFFLRDNFNRNMYEEFRKLALEDAEIGSRYGIEALFRFYSYGLEKKFRPE 980
Query: 1401 LYQHFQTETMADYEKGQLYGLEKFWAFLKYYKHASALQVEPKLQGYLSKFKSIEDFRVL 1459
+Y++F + D +KG+LYGLEK +AFL+ K A L V+ L L+K+KS +DFR L
Sbjct: 981 IYKNFMKDVTTDVQKGELYGLEKLFAFLQRSKIAKQLVVDDYLTKELNKYKSTDDFRNL 1039
Score = 99.5 bits (237), Expect = 2e-20
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 188 YSRLLCEYYFSPDNLARDFFLRRKMSPDGTIPVTLIASFHRVRALTSDVQLVLDAIRDSE 247
Y R EYYFS +NL +DFFLRRKM P+G +PV LIASF RVR+LT D L+L+A++DS
Sbjct: 523 YVRKQIEYYFSEENLQKDFFLRRKMGPEGYLPVALIASFPRVRSLTEDYSLILEALKDST 582
Query: 248 RLELI-SGFKVRTVFEPTKWPILDVATSSD 276
++++ G ++R PT WP++ + +D
Sbjct: 583 KVDMSPDGLQIRAPVNPTIWPLMPTVSGAD 612
Score = 41.5 bits (93), Expect = 0.004
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 1130 PPRHNTFTDAWSDEESDAEFTDGDVGRLLIVTQTTRAAKHDGHDRQGDWTSRTKITQDLE 1189
P R A+ E D + +L+I+T + R DR GD+++R++ +
Sbjct: 671 PKRPEKSKKAFLSAIDSEEIGDDVISKLIIMTPSRRTL-----DRTGDFSTRSQNQGEFN 725
Query: 1190 QVITDGLRRYEEDLW 1204
+ + GLRRYEE+LW
Sbjct: 726 EEVEIGLRRYEEELW 740
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 62.1 bits (144), Expect = 3e-09
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 194 EYYFSPDNLARDFFLRRKMSPDGTIPVTLIASFHRVRALTSDVQLVLDAIRDSERLELIS 253
EYYFS +NL+ D +L+ +M D +P+ ++A F ++ LT+DV L+++A+++S +EL
Sbjct: 147 EYYFSRENLSSDRYLKCQMDSDNYVPINVLAGFPKIMRLTTDVDLIVEALKESTNVELDE 206
Query: 254 GF-KVRTV 260
F KVR +
Sbjct: 207 KFEKVRAI 214
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 62.1 bits (144), Expect = 3e-09
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 194 EYYFSPDNLARDFFLRRKMSPDGTIPVTLIASFHRVRALTSDVQLVLDAIRDSERLELIS 253
EYYFS +NL+ D +L+ +M D +P+ ++A F ++ LT+DV L+++A+++S +EL
Sbjct: 49 EYYFSRENLSSDRYLKCQMDSDNYVPINVLAGFPKIMRLTTDVDLIVEALKESTNVELDE 108
Query: 254 GF-KVRTV 260
F KVR +
Sbjct: 109 KFEKVRAI 116
>AF003140-7|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 48.4 bits (110), Expect = 4e-05
Identities = 20/54 (37%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 194 EYYFSPDNLARDFFLRRKMSPD-GTIPVTLIASFHRVRALTSDVQLVLDAIRDS 246
EYYF NL RD FL+ K+ D G +P+T + +F+R+ +++ D + + +A+++S
Sbjct: 21 EYYFGNINLPRDKFLQEKLKEDDGWVPITTMLNFNRLASISKDTEKIANAVKNS 74
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 37.1 bits (82), Expect = 0.095
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 1050 RRQQDNGSQPGEQPGGRPRSAAHSPQAEGGAADWTEVKR-----RTKAGSRERSAAGGPA 1104
R ++DN S G GGR RS + SP+AE A+ +R R+++ SR RSA+ P+
Sbjct: 193 RVREDNSSGGGSGGGGRDRSRSRSPRAERRASPKYSPRRSRSRSRSRSRSRSRSASRSPS 252
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 37.1 bits (82), Expect = 0.095
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 1050 RRQQDNGSQPGEQPGGRPRSAAHSPQAEGGAADWTEVKR-----RTKAGSRERSAAGGPA 1104
R ++DN S G GGR RS + SP+AE A+ +R R+++ SR RSA+ P+
Sbjct: 193 RVREDNSSGGGSGGGGRDRSRSRSPRAERRASPKYSPRRSRSRSRSRSRSRSRSASRSPS 252
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 35.9 bits (79), Expect = 0.22
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 69 PNSIMLLIFQEQERKPLEEHHQHPQNQAKVDKPE 102
PN +M L+ Q+++ ++HHQH +NQ V P+
Sbjct: 139 PNGMMQLLSMVQQQQQQQQHHQHIENQQSVSPPQ 172
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 35.9 bits (79), Expect = 0.22
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 69 PNSIMLLIFQEQERKPLEEHHQHPQNQAKVDKPE 102
PN +M L+ Q+++ ++HHQH +NQ V P+
Sbjct: 139 PNGMMQLLSMVQQQQQQQQHHQHIENQQSVSPPQ 172
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 35.9 bits (79), Expect = 0.22
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 69 PNSIMLLIFQEQERKPLEEHHQHPQNQAKVDKPE 102
PN +M L+ Q+++ ++HHQH +NQ V P+
Sbjct: 139 PNGMMQLLSMVQQQQQQQQHHQHIENQQSVSPPQ 172
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 35.5 bits (78), Expect = 0.29
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 5/141 (3%)
Query: 982 PGEKRRKKQMVGIFPLATMGGPLVAPVSGLLRAVXXXXXXRMFRTSRPGPTPPHDSLDPN 1041
P + +++Q P + GGP A VSG + S +
Sbjct: 31 PSQNAQQQQQQASAPGTSSGGPSQA-VSGASSGASMKTEPVARQVSTAQMKRDLEQAAVY 89
Query: 1042 VPEFVPQARRQQDNGSQPGEQPGGRPRSAAHSPQ-AEGGAADWTEVKRRTKAGSRERSAA 1100
VP +P+ Q Q QP R S + + AA T K+ + SRE+ A
Sbjct: 90 VPTPIPEGSTQPQQRQQQQSQPQARQMSTQQAANLRKNAAAAGTPPKQAMQGASREQGNA 149
Query: 1101 GGPATDGEVP--DEEPREELH 1119
P T G++P +P ++ H
Sbjct: 150 HQP-TAGQIPQSSNQPAQQTH 169
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 35.5 bits (78), Expect = 0.29
Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 5/141 (3%)
Query: 982 PGEKRRKKQMVGIFPLATMGGPLVAPVSGLLRAVXXXXXXRMFRTSRPGPTPPHDSLDPN 1041
P + +++Q P + GGP A VSG + S +
Sbjct: 31 PSQNAQQQQQQASAPGTSSGGPSQA-VSGASSGASMKTEPVARQVSTAQMKRDLEQAAVY 89
Query: 1042 VPEFVPQARRQQDNGSQPGEQPGGRPRSAAHSPQ-AEGGAADWTEVKRRTKAGSRERSAA 1100
VP +P+ Q Q QP R S + + AA T K+ + SRE+ A
Sbjct: 90 VPTPIPEGSTQPQQRQQQQSQPQARQMSTQQAANLRKNAAAAGTPPKQAMQGASREQGNA 149
Query: 1101 GGPATDGEVP--DEEPREELH 1119
P T G++P +P ++ H
Sbjct: 150 HQP-TAGQIPQSSNQPAQQTH 169
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical protein
ZC373.7 protein.
Length = 297
Score = 34.7 bits (76), Expect = 0.51
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 1029 PGPTPPHDSLDPNVPEFVPQARRQQDNGSQPGE--QPGGRPRSAAHSPQAEGGAADWTEV 1086
PGP P S P P+ Q + PG QPG + + A P A GG +
Sbjct: 151 PGPAGPAGSAGPAGPKGPDGRPGQPGSAGHPGAPGQPGSKGNNGA--PGAAGGPG---QP 205
Query: 1087 KRRTKAGSRERSAAGGPATDGEVPDEEP 1114
R K G R + +AG P G+ P
Sbjct: 206 GRPGKDGQRGKGSAGAPGAPGKAGPAGP 233
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 34.7 bits (76), Expect = 0.51
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 300 ENNEKEQAKTNADDVVQVKQVACVSLPPKNVKTNKSFYIFRNATNIPQDCSDVESELFDS 359
+ E +++K + VV+ K+ P+ KT K R+ T+ + ESE D
Sbjct: 214 DEKEVKKSKKKSKKVVK-KESESEDEAPEKKKTEKRK---RSKTSSEESS---ESEKSDE 266
Query: 360 DGELLDTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDCENMPNKRTRRCMRFPSSS 419
+ E ++ P+ + LSSDEE S +SD E +P K+ R + S S
Sbjct: 267 EEEEKESSPKPKKKKPLAVKKLSSDEE---------SEESDVEVLPQKKKRGAVTLISDS 317
Query: 420 EDEDGSNVPNQQTEI 434
EDE ++ +++
Sbjct: 318 EDEKDQKSESEASDV 332
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 34.7 bits (76), Expect = 0.51
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 16/135 (11%)
Query: 300 ENNEKEQAKTNADDVVQVKQVACVSLPPKNVKTNKSFYIFRNATNIPQDCSDVESELFDS 359
+ E +++K + VV+ K+ P+ KT K R+ T+ + ESE D
Sbjct: 214 DEKEVKKSKKKSKKVVK-KESESEDEAPEKKKTEKRK---RSKTSSEESS---ESEKSDE 266
Query: 360 DGELLDTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDCENMPNKRTRRCMRFPSSS 419
+ E ++ P+ + LSSDEE S +SD E +P K+ R + S S
Sbjct: 267 EEEEKESSPKPKKKKPLAVKKLSSDEE---------SEESDVEVLPQKKKRGAVTLISDS 317
Query: 420 EDEDGSNVPNQQTEI 434
EDE ++ +++
Sbjct: 318 EDEKDQKSESEASDV 332
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical protein
Y57G11A.2 protein.
Length = 640
Score = 33.1 bits (72), Expect = 1.5
Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 25/192 (13%)
Query: 954 DSAPDTQEDKKLDSSDDPPLQ---TEGTEERPGEKR-RKKQMVGIFPLATMGGPLVAPVS 1009
D+A +T + ++++S + P + TE + + P + + G T GP+ P
Sbjct: 387 DTAEETNNESEVEASTEAPFEVAATEDSNQAPVDPIFTEAPAEGSQEEQTSDGPVFIPED 446
Query: 1010 GLLRA------VXXXXXXRMFRTSRPGPTPPHDSLDPNVPEFVPQARRQQDNGSQPGEQP 1063
G + + V + S GP P P E VP + E P
Sbjct: 447 GSVHSTEAPFEVAATEVSEVTHGSGSGPMPEQTDEVPGPWEPVPSPVPEP-------EDP 499
Query: 1064 GGRPRSAAHS---PQAEGGAADWTEVKRRTKAGSRERSAAGGPATDGEVPD-EEPREELH 1119
RP A + P E D + T G + + GPA E+P+ EP EE
Sbjct: 500 VPRPELATTTEGLPVQE--PEDPNPIPEDTVPGPEDTTP--GPAVTEEIPEVPEPTEEPP 555
Query: 1120 FQLDEELDLPPP 1131
D E+D P P
Sbjct: 556 TPTDSEIDSPTP 567
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical protein
Y57G11A.2 protein.
Length = 640
Score = 33.1 bits (72), Expect = 1.5
Identities = 47/192 (24%), Positives = 72/192 (37%), Gaps = 25/192 (13%)
Query: 954 DSAPDTQEDKKLDSSDDPPLQ---TEGTEERPGEKR-RKKQMVGIFPLATMGGPLVAPVS 1009
D+A +T + ++++S + P + TE + + P + + G T GP+ P
Sbjct: 387 DTAEETNNESEVEASTEAPFEVAATEDSNQAPVDPIFTEAPAEGSQEEQTSDGPVFIPED 446
Query: 1010 GLLRA------VXXXXXXRMFRTSRPGPTPPHDSLDPNVPEFVPQARRQQDNGSQPGEQP 1063
G + + V + S GP P P E VP + E P
Sbjct: 447 GSVHSTEAPFEVAATEVSEVTHGSGSGPMPEQTDEVPGPWEPVPSPVPEP-------EDP 499
Query: 1064 GGRPRSAAHS---PQAEGGAADWTEVKRRTKAGSRERSAAGGPATDGEVPD-EEPREELH 1119
RP A + P E D + T G + + GPA E+P+ EP EE
Sbjct: 500 VPRPELATTTEGLPVQE--PEDPNPIPEDTVPGPEDTTP--GPAVTEEIPEVPEPTEEPP 555
Query: 1120 FQLDEELDLPPP 1131
D E+D P P
Sbjct: 556 TPTDSEIDSPTP 567
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 33.1 bits (72), Expect = 1.5
Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 353 ESELFDSDGELLDTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDCENMPNKRTRRC 412
+++L D + +LD+ N++ S S+ ++ + + SD+D + ++ +R
Sbjct: 350 QTDLDDEEESMLDSDFEISDNEDVSKPSCSTSKKTTNRSRDSSESDNDSRDNELQKKKRK 409
Query: 413 MRFPSSSEDEDGSNVPNQQTEIAADGTI 440
M+ + DGS+V N+ + A G +
Sbjct: 410 MK-RKNVPKTDGSDVSNESFDEDASGEV 436
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily assigned
gene nameprotein 345 protein.
Length = 439
Score = 32.7 bits (71), Expect = 2.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 965 LDSSDDPPLQTEGTEERPGEKRRKKQMVGIFPLATMGG 1002
LD+SD+ + EE +KRRKK+ P+ T+GG
Sbjct: 240 LDASDEATTYEKEEEEESAKKRRKKETKTKVPMVTIGG 277
>AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical
protein ZC190.4 protein.
Length = 629
Score = 32.3 bits (70), Expect = 2.7
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Query: 1210 TSVDQQPAGGGKASRPRRTARFYAASKDPHATDVICSRKHKTRYSLNPPVEHHVGWIMDV 1269
++++QQP+G A P +R +P ++ + ++ + Y+ N +G I V
Sbjct: 13 SALEQQPSGSSAAIFPPSISRSTQRRPEPLEDQLLMNMQNVSIYTTNDLDLASLG-IQSV 71
Query: 1270 REHRPRTQSTGSSLGASPTLGSSCGSMPQSLPTFHHPSHGLLRENHFTQQAYHKYHSR 1327
Q S G+ T G + GS S P S G LR++H +H+ H +
Sbjct: 72 TMTGNPWQPNSLSFGSVSTNGFT-GSDTSSAPMSPISSPG-LRKHHLQGNGFHQQHQK 127
>U00044-7|AAA50675.1| 990|Caenorhabditis elegans Hypothetical
protein K04C2.2 protein.
Length = 990
Score = 31.5 bits (68), Expect = 4.7
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 353 ESELFDSDGELLDTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDCENMPNKRTRRC 412
+ ++ D +G D P GN ++ A+ D+E D+D N++ D + + N
Sbjct: 585 DEDMEDEEGMPFDESEIPSGNGDDEASDSDDDDEEEDDDEGNEAVDQELLDKLNAALGDA 644
Query: 413 MRFPSSSEDE 422
SSS+ E
Sbjct: 645 APRDSSSDVE 654
>AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.5 bits (68), Expect = 4.7
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 1027 SRPGPTPPHDSLDPNVPEFVPQARRQQDNGSQPGEQPGGRPRSAAHSPQAEGGAADWTEV 1086
++PGP P++S DPN P P + + ++PG P G + + G + ++
Sbjct: 1166 NKPGPNGPNESSDPNKPG--PNGPNEPSDPNKPG--PNGPNGPSDPNKPGPNGPNEPSDP 1221
Query: 1087 KRRTKAGSRERSAAGGPATDGEVPDEEPRE 1116
+ GS S P +G +P +
Sbjct: 1222 NKPGPNGSNGPSDPNKPGPNGPNGPSDPNK 1251
>Z81586-12|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 31.1 bits (67), Expect = 6.2
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 345 IPQDCSDVESELFDSDGELLDTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDCENM 404
I D SD + ++ +S DT+ P+ N+E + DE DE++I+ + D +
Sbjct: 129 ISMDTSDDKLDIAESISVSNDTE-KPEENEEK----VVGDE---DEEDIDDVQEDDEDEA 180
Query: 405 PNKRTRRCMRFPSSSEDED 423
P K+T++ + S+S+D+D
Sbjct: 181 PKKKTKKAV---STSDDDD 196
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical protein
C15A11.1 protein.
Length = 303
Score = 31.1 bits (67), Expect = 6.2
Identities = 24/91 (26%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Query: 1029 PGPTPPHDSLDPNVPEFVPQARRQQDNGSQPGEQ-PGGRP----RSAAHSPQAEGGAADW 1083
PGP P + P P P A + G P G P + A P + GAA
Sbjct: 117 PGPPGPDGNAGPEGPSGAPGADGDAAGPGEAGPAGPAGPPGPDGQPGAPGPNGQPGAAGT 176
Query: 1084 TEVKRRTKAGSRERSAAGGPATDGEVPDEEP 1114
T G GPA + E P
Sbjct: 177 TSTNEPGSPGPAGPPGPAGPAGEDAAAPESP 207
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 31.1 bits (67), Expect = 6.2
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 145 RQNKHGPPHGARPENVRMRSYQGKIG 170
+QN+H P GA PEN R +SY+G G
Sbjct: 656 QQNQHPPREGA-PENYRQQSYRGNRG 680
>Z29561-4|CAD91697.1| 498|Caenorhabditis elegans Hypothetical protein
R10E12.1d protein.
Length = 498
Score = 31.1 bits (67), Expect = 6.2
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 1029 PGPTPPHDSLDPNVPEFVPQARRQQDNGSQPGEQPGGRPRSAAHSPQAE 1077
P P PP + P+V +P R QQ + PG P P PQ +
Sbjct: 371 PRPPPPRPAA-PSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQ 418
>Z29561-2|CAD54152.1| 882|Caenorhabditis elegans Hypothetical protein
R10E12.1b protein.
Length = 882
Score = 31.1 bits (67), Expect = 6.2
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 1029 PGPTPPHDSLDPNVPEFVPQARRQQDNGSQPGEQPGGRPRSAAHSPQAE 1077
P P PP + P+V +P R QQ + PG P P PQ +
Sbjct: 755 PRPPPPRPAA-PSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQ 802
>Z29561-1|CAA82667.2| 861|Caenorhabditis elegans Hypothetical protein
R10E12.1a protein.
Length = 861
Score = 31.1 bits (67), Expect = 6.2
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 1029 PGPTPPHDSLDPNVPEFVPQARRQQDNGSQPGEQPGGRPRSAAHSPQAE 1077
P P PP + P+V +P R QQ + PG P P PQ +
Sbjct: 734 PRPPPPRPAA-PSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQ 781
>U73679-1|AAC67305.1| 861|Caenorhabditis elegans YNK1-a protein.
Length = 861
Score = 31.1 bits (67), Expect = 6.2
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 1029 PGPTPPHDSLDPNVPEFVPQARRQQDNGSQPGEQPGGRPRSAAHSPQAE 1077
P P PP + P+V +P R QQ + PG P P PQ +
Sbjct: 734 PRPPPPRPAA-PSVESPIPPPRTQQSMQATPGAPPQYNPYQQQQQPQMQ 781
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 6.2
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 1030 GPTPPHDSLDPNVPEFVPQARRQQDNGSQP-GEQPGGRPRSAAHSPQAEGGAADWTEVKR 1088
G PP + P P P+ +RQ S P G P G P + G +++ + R
Sbjct: 319 GSPPPAGTGSPPPP---PRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESR 375
Query: 1089 RTKAGSRERSAAGGPATDGEVPDEEPREE 1117
G GGP E E REE
Sbjct: 376 EGPRGGPRGGPRGGPRKSSE-ESSESREE 403
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 6.2
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 1030 GPTPPHDSLDPNVPEFVPQARRQQDNGSQP-GEQPGGRPRSAAHSPQAEGGAADWTEVKR 1088
G PP + P P P+ +RQ S P G P G P + G +++ + R
Sbjct: 340 GSPPPAGTGSPPPP---PRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESR 396
Query: 1089 RTKAGSRERSAAGGPATDGEVPDEEPREE 1117
G GGP E E REE
Sbjct: 397 EGPRGGPRGGPRGGPRKSSE-ESSESREE 424
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 6.2
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 1030 GPTPPHDSLDPNVPEFVPQARRQQDNGSQP-GEQPGGRPRSAAHSPQAEGGAADWTEVKR 1088
G PP + P P P+ +RQ S P G P G P + G +++ + R
Sbjct: 325 GSPPPAGTGSPPPP---PRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESSESR 381
Query: 1089 RTKAGSRERSAAGGPATDGEVPDEEPREE 1117
G GGP E E REE
Sbjct: 382 EGPRGGPRGGPRGGPRKSSE-ESSESREE 409
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 30.7 bits (66), Expect = 8.2
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 342 ATNIPQDCSDVESELFDSDGELLDTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDC 401
A+ + S++E D DG++++ P G E++AN + EEVLDE+ S +
Sbjct: 119 ASEVTVASSEIEQ---DDDGDVMEITEEPNGKSEDTAN-GTVTEEVLDEEEPEPSVNGTT 174
Query: 402 E 402
E
Sbjct: 175 E 175
>Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical protein
C03D6.5 protein.
Length = 245
Score = 30.7 bits (66), Expect = 8.2
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 1105 TDGEVPDEEPREELHFQLDEELDLPPPRHNTFTDAWSDEESDAEFTDGDVGRL 1157
TD E+ + P + L +L +++ R TF W+DE+ AE D + ++
Sbjct: 119 TDEELKENPPAKPLIEKLSRKIETEDLRVTTFPIRWTDEDPVAEPVDEEANKV 171
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 30.7 bits (66), Expect = 8.2
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 1074 PQAEGGAA-DWTEVKRRTKAGSRERS-AAGGPATDGEVPDEEPREELHFQL 1122
P ++GGA + ++++RTK G E + G T VPD P EE F++
Sbjct: 2366 PLSDGGAPIEEYQIEKRTKYGRWEPAITVPGGQTTATVPDLTPNEEYEFRV 2416
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 8.2
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 1074 PQAEGGAA-DWTEVKRRTKAGSRERS-AAGGPATDGEVPDEEPREELHFQL 1122
P ++GGA + ++++RTK G E + G T VPD P EE F++
Sbjct: 2895 PLSDGGAPIEEYQIEKRTKYGRWEPAITVPGGQTTATVPDLTPNEEYEFRV 2945
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 8.2
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 1074 PQAEGGAA-DWTEVKRRTKAGSRERS-AAGGPATDGEVPDEEPREELHFQL 1122
P ++GGA + ++++RTK G E + G T VPD P EE F++
Sbjct: 2576 PLSDGGAPIEEYQIEKRTKYGRWEPAITVPGGQTTATVPDLTPNEEYEFRV 2626
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 30.7 bits (66), Expect = 8.2
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 1074 PQAEGGAA-DWTEVKRRTKAGSRERS-AAGGPATDGEVPDEEPREELHFQL 1122
P ++GGA + ++++RTK G E + G T VPD P EE F++
Sbjct: 2366 PLSDGGAPIEEYQIEKRTKYGRWEPAITVPGGQTTATVPDLTPNEEYEFRV 2416
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 30.7 bits (66), Expect = 8.2
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 1074 PQAEGGAA-DWTEVKRRTKAGSRERS-AAGGPATDGEVPDEEPREELHFQL 1122
P ++GGA + ++++RTK G E + G T VPD P EE F++
Sbjct: 2895 PLSDGGAPIEEYQIEKRTKYGRWEPAITVPGGQTTATVPDLTPNEEYEFRV 2945
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 30.7 bits (66), Expect = 8.2
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 1074 PQAEGGAA-DWTEVKRRTKAGSRERS-AAGGPATDGEVPDEEPREELHFQL 1122
P ++GGA + ++++RTK G E + G T VPD P EE F++
Sbjct: 2576 PLSDGGAPIEEYQIEKRTKYGRWEPAITVPGGQTTATVPDLTPNEEYEFRV 2626
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 30.7 bits (66), Expect = 8.2
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 1074 PQAEGGAA-DWTEVKRRTKAGSRERS-AAGGPATDGEVPDEEPREELHFQL 1122
P ++GGA + ++++RTK G E + G T VPD P EE F++
Sbjct: 1785 PLSDGGAPIEEYQIEKRTKYGRWEPAITVPGGQTTATVPDLTPNEEYEFRV 1835
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein 1,
isoform d protein.
Length = 1106
Score = 30.7 bits (66), Expect = 8.2
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 1064 GGRPRSAAHSPQAEGGAADWTEVKRRTKAGS-----RERSAAGGPATDGEVPDEEPREEL 1118
GG ++AH+ G + D R +K GS R + A P+T G PD P
Sbjct: 82 GGIASTSAHNGMVGGLSRDSRAASRTSKRGSSKSLNRPQIDADEPSTSGTNPDRRP--ST 139
Query: 1119 HFQLD 1123
HF LD
Sbjct: 140 HFVLD 144
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 30.7 bits (66), Expect = 8.2
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 342 ATNIPQDCSDVESELFDSDGELLDTQIAPQGNDENSANILSSDEEVLDEDNINQSSDSDC 401
A+ + S++E D DG++++ P G E++AN + EEVLDE+ S +
Sbjct: 119 ASEVTVASSEIEQ---DDDGDVMEITEEPNGKSEDTAN-GTVTEEVLDEEEPEPSVNGTT 174
Query: 402 E 402
E
Sbjct: 175 E 175
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,291,406
Number of Sequences: 27539
Number of extensions: 1678397
Number of successful extensions: 5811
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 5671
Number of HSP's gapped (non-prelim): 172
length of query: 1490
length of database: 12,573,161
effective HSP length: 91
effective length of query: 1399
effective length of database: 10,067,112
effective search space: 14083889688
effective search space used: 14083889688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)
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