GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001643-TA|BGIBMGA001643-PA|undefined
         (404 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.97 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.9  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   6.8  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   6.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   6.8  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   6.8  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   6.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   9.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.0 bits (52), Expect = 0.97
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 64  NVPSVSLSRSI---QTRIASDS-PNTSTTKTRINQPQSLFIQALTK 105
           NVP   +   I   Q +I S S  NTST+ T  N+P S  +  L K
Sbjct: 406 NVPVPPMQSQIINPQPQITSPSNTNTSTSSTNSNKPNSSDLNMLIK 451


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)

Query: 39  DLNSSTPEPPNSFNDASNISLPTNN 63
           D+ S+ P PP   +D SNI  P NN
Sbjct: 208 DVPSTIPPPPPEEDDDSNI--PQNN 230


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 7/63 (11%)

Query: 2   EGKDLNVSTQFGSNCEQV---ENRIG----EDNEMASSREIVSHDLNSSTPEPPNSFNDA 54
           EG  +  S     N E++   +N +G    ++NE+      V H +  ST +P N  ND 
Sbjct: 599 EGNQVEGSPVTSLNREEIKRLDNGVGFLKVKENEITLLVATVRHVMAPSTCQPQNPDNDV 658

Query: 55  SNI 57
            +I
Sbjct: 659 HSI 661


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)

Query: 206 GFSPMFVSCPEC 217
           GF   FV CPEC
Sbjct: 5   GFIRKFVLCPEC 16


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 57  ISLPTNNNVPSVSLSRSIQTRIASDSPNTSTT 88
           ++LP    +PS   S  I     S SP T  T
Sbjct: 69  VALPPKREIPSPKRSSPILAEKVSVSPTTPPT 100


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 14/61 (22%), Positives = 26/61 (42%)

Query: 123 QEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPP 182
           + ++ M L  ++ T    D ++ A  +YS + R +   P   +  T+I         PP 
Sbjct: 143 ERISVMNLITEEITTHQADLIIEADGAYSTLRRYMQLTPLFEYSQTYIQHGYLELVIPPE 202

Query: 183 N 183
           N
Sbjct: 203 N 203


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 14/61 (22%), Positives = 26/61 (42%)

Query: 123 QEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPP 182
           + ++ M L  ++ T    D ++ A  +YS + R +   P   +  T+I         PP 
Sbjct: 143 ERISVMNLITEEITTHQADLIIEADGAYSTLRRYMQLTPLFEYSQTYIQHGYLELVIPPE 202

Query: 183 N 183
           N
Sbjct: 203 N 203


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 14/61 (22%), Positives = 26/61 (42%)

Query: 123 QEMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPP 182
           + ++ M L  ++ T    D ++ A  +YS + R +   P   +  T+I         PP 
Sbjct: 143 ERISVMNLITEEITTHQADLIIEADGAYSTLRRYMQLTPLFEYSQTYIQHGYLELVIPPE 202

Query: 183 N 183
           N
Sbjct: 203 N 203


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 12/43 (27%), Positives = 14/43 (32%)

Query: 329  PDIEEEEGFVPVISHGRRPGKNRRDRERKAPPRAHKTPQQHAD 371
            P I+EE   V  +   R             PP  H T Q   D
Sbjct: 1776 PPIDEEPPSVEAVEEEREEAPPSVHSSTVVPPPQHSTTQSLVD 1818


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.131    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,353
Number of Sequences: 317
Number of extensions: 4309
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 10
length of query: 404
length of database: 114,650
effective HSP length: 58
effective length of query: 346
effective length of database: 96,264
effective search space: 33307344
effective search space used: 33307344
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)