BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001643-TA|BGIBMGA001643-PA|undefined (404 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0299 - 2322204-2322734,2324089-2326164 36 0.058 12_02_1200 + 26937624-26937674,26937913-26938005,26938582-269387... 34 0.18 03_05_0718 - 27100882-27100929,27101197-27101303,27101446-271015... 33 0.54 09_02_0351 - 7686974-7686983,7687142-7687195,7687363-7687408,768... 32 0.71 01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402... 32 0.71 04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 32 0.94 02_05_0190 - 26592452-26592693,26592911-26593004,26593425-265936... 32 0.94 06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 31 1.2 10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 31 1.6 10_01_0073 - 955746-955758,955811-956832 31 1.6 10_01_0072 - 918323-918335,918388-919409 31 1.6 04_04_1257 - 32155935-32156526,32156655-32157067 31 2.2 12_02_0046 + 12830974-12832386 30 3.8 08_02_0593 + 19078264-19078609,19078724-19082256 30 3.8 02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 30 3.8 03_01_0540 - 4055635-4055743,4055829-4055981,4056037-4056104,405... 29 5.0 01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667 29 6.6 11_06_0717 - 26575009-26575152,26576461-26577978 29 8.8 07_03_1756 - 29239137-29239325,29239741-29240259,29240693-292408... 29 8.8 06_03_0138 + 17093196-17093325,17095704-17095804,17096224-170962... 29 8.8 04_04_1202 - 31700414-31700854 29 8.8 04_04_0827 - 28457858-28458028,28458513-28458669,28458984-284590... 29 8.8 04_01_0611 - 8029101-8029205,8029985-8030107,8030191-8030556,803... 29 8.8 >05_01_0299 - 2322204-2322734,2324089-2326164 Length = 868 Score = 35.9 bits (79), Expect = 0.058 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%) Query: 44 TPEPPNSFN--DASNISLPTNNNVPS--VSLSRSIQTRIASDSPNTSTTKTRINQPQSLF 99 TP PPNS+N A + + P N NVPS S+S Q+ I + P ++ + + F Sbjct: 282 TPVPPNSYNTAKADSSATPANLNVPSSKPSVSGKAQSEIPNLKPKENSNPVPDHSEEQPF 341 Query: 100 IQALTKLNED 109 + A T+ +D Sbjct: 342 VAAATQPVKD 351 >12_02_1200 + 26937624-26937674,26937913-26938005,26938582-26938728, 26940299-26940379,26940711-26940849,26940977-26941013, 26941095-26941202,26941434-26941533,26941638-26941783, 26941862-26941953,26942086-26942180,26942435-26942531, 26942623-26942766,26942912-26943129,26943213-26943323 Length = 552 Score = 34.3 bits (75), Expect = 0.18 Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 14/129 (10%) Query: 251 LPYVMRSCKH----HGCALVIASRRGARARTYIRDSGGVMAARVSAEGAGPSYASVLNFK 306 L YVM C H HG +S G + Y+ + G A V+ E N Sbjct: 71 LGYVMYDCTHYYLHHGQP---SSDPGKHLKKYLHNMAGGSADAVTKEMEALLVGQNPNAV 127 Query: 307 GGE----SNKENIEAHAEEALDAPPRPDIEEEEGFVPVISHGRRPGKNRRDRERKAPPRA 362 GE S+KE A + + +PP D +E +G P G K ++ +K+ + Sbjct: 128 SGETCETSSKEGKVADSNGSHSSPPEDDDDEAQGDGPSQDGGSEAAKKKK---KKSKSKK 184 Query: 363 HKTPQQHAD 371 K P Q D Sbjct: 185 KKGPLQQTD 193 >03_05_0718 - 27100882-27100929,27101197-27101303,27101446-27101593, 27102195-27102328,27102608-27102929 Length = 252 Score = 32.7 bits (71), Expect = 0.54 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Query: 248 CVPLPYVMRSCKHHGCALVIASRRGARARTYIRDSGGVMAARVSAEGAGPSYASVLNFKG 307 C+P+ + K G + + + R G R RD GV+ A VSA AG + AS + G Sbjct: 37 CLPVLLHVNGSKKQGSSFLSSQRIGLSRRRRRRDLSGVVVAEVSA-AAGVTPASSSSSPG 95 Query: 308 GES 310 G S Sbjct: 96 GIS 98 >09_02_0351 - 7686974-7686983,7687142-7687195,7687363-7687408, 7688179-7688280,7688683-7689284,7689599-7689783 Length = 332 Score = 32.3 bits (70), Expect = 0.71 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 8/95 (8%) Query: 252 PYVMRSCKHHGCALVIASRRGARARTYIRDSGGVMAARVSAEGAGPSYASVLNFKGGESN 311 P+++R+ K CALV+AS+ A A D G GAG S + + GE Sbjct: 88 PFILRN-KKRNCALVVASKPAAEAAG--GDKQGTTKPEQIVPGAGSSSSRTHQPQTGERR 144 Query: 312 KENIEAHAEEALDAPPRPDIEEEEGFVPVI--SHG 344 + E + ++ A RP EEG + V+ HG Sbjct: 145 RSTPETGSSKS--AGKRP-ARREEGPLQVVLGKHG 176 >01_07_0306 + 42638683-42638990,42639074-42639314,42639935-42640236, 42640431-42640607,42640853-42641617,42641697-42641791, 42641889-42641951,42642047-42642135,42642229-42642324, 42642457-42643104,42643596-42643628,42643838-42643912, 42644442-42644603,42644604-42644674,42644758-42644815, 42645196-42645394,42645487-42645552,42645699-42646183 Length = 1310 Score = 32.3 bits (70), Expect = 0.71 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%) Query: 25 EDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRS--IQTRIASD- 81 E+ EM S+ H+LN+ST + N SLP +N+ S+ S + +TR + D Sbjct: 685 EELEMGMSKSSDEHNLNTST-NYSGPLSMGQNSSLPQSNSCVSLEQSEANGPRTRESIDI 743 Query: 82 -SPNTSTTKTRINQPQSLF 99 SPN T ++ + LF Sbjct: 744 LSPNDENTASQKTHAEELF 762 >04_04_0411 - 25014511-25015015,25015098-25015169,25015700-25015734, 25015805-25015873,25015993-25016044,25016444-25016526, 25016625-25016726,25017150-25017884,25017962-25018012, 25018792-25018983,25019066-25019216,25020012-25020193, 25020329-25020532,25020752-25020859 Length = 846 Score = 31.9 bits (69), Expect = 0.94 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 10/97 (10%) Query: 279 IRDSGGVMAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPPRPDIEEEEGFV 338 + DSGG R++ + S S GES+K+ + + ++ D PP D +E+ Sbjct: 484 VSDSGGRATRRLAKDDDIKS--SFKKTGEGESSKKKQKENLKQQEDTPPDEDTDEDLSLK 541 Query: 339 PVIS--HGRRPGKNRRD------RERKAPPRAHKTPQ 367 ++S + GKN+ +RK A +TPQ Sbjct: 542 DIVSPKSSAKTGKNKGQAGDSGGSKRKRAQEAEETPQ 578 >02_05_0190 - 26592452-26592693,26592911-26593004,26593425-26593656, 26594660-26595066 Length = 324 Score = 31.9 bits (69), Expect = 0.94 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Query: 268 ASRRGARARTYIRDSGGVMAARV----SAEGAGPSYASVLNFKGGESNKENIEAHAEEAL 323 +S G R RT R G ++ A SA A + S + GE E + A AEEA+ Sbjct: 43 SSSSGGRPRT--RSGGRLLRATSPPPPSAIAAAACWESRTMRREGEEEWEEVVAGAEEAV 100 Query: 324 DAPPRPDIEEEEGF 337 P P EEEE + Sbjct: 101 HGAPVPVAEEEEEY 114 >06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507, 8057595-8058314,8058404-8058603,8058988-8059172, 8059287-8059354,8059432-8060246,8060502-8060599, 8060702-8060887,8061358-8061538,8061651-8061812, 8061894-8061937,8062059-8062115,8062409-8062505, 8062614-8062786,8062868-8063081,8063270-8063395, 8064072-8064188,8064459-8064566,8064729-8064898, 8065049-8065127,8065211-8065285,8065845-8065942, 8066030-8066137,8066238-8066295,8066527-8066631, 8067461-8069516,8069804-8070697,8070896-8071852, 8072022-8072075,8072157-8072222,8072294-8073472, 8073868-8075598,8075764-8075829,8076763-8077788, 8077893-8078041 Length = 4264 Score = 31.5 bits (68), Expect = 1.2 Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 8/123 (6%) Query: 28 EMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTST 87 E+ +S E + ++ P PP +DA+++S + +P+ ++ + SP+ + Sbjct: 4129 EIGTSPECDDDQVATAAPHPPTPLSDATDVS--ADVQIPAGISEAKLEQPNETTSPSGAA 4186 Query: 88 TKTRINQPQSLFIQALTKLNEDSVKFTVINIIKTQQEMAKMA-LNDDQHTLSAPDSLMSA 146 T+ N S I L + + + T I T+ + A+ A ++DD++ ++A D SA Sbjct: 4187 TEEN-NTVVSTQIPTLAESEDRTPADTAIQ--GTEVDSAEPASVSDDENKVTAADD--SA 4241 Query: 147 PPS 149 PS Sbjct: 4242 LPS 4244 Score = 28.7 bits (61), Expect = 8.8 Identities = 16/54 (29%), Positives = 28/54 (51%) Query: 270 RRGARARTYIRDSGGVMAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEAL 323 RRG + ++ +G V+ + V A G+G +YAS + + N + A+A L Sbjct: 1748 RRGRKPKSLAASAGDVILSPVVAVGSGEAYASSVVSSYPQGNVSSSHANAMAGL 1801 >10_08_0106 + 14842748-14843085,14843122-14843250,14844145-14844211, 14847177-14847324,14847998-14848097,14848306-14848384, 14848527-14848687,14848829-14848908,14849319-14849475, 14849575-14849723,14849909-14850076,14850426-14850719, 14851002-14851046,14851213-14851462,14851707-14851835, 14852799-14853039,14853977-14854642 Length = 1066 Score = 31.1 bits (67), Expect = 1.6 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 4/97 (4%) Query: 268 ASRRGARARTYIRDSGGVMAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPP 327 ASR A + +++ AR A+G S S ++F GG+ N + + + D PP Sbjct: 900 ASRHEAAEHAHAKNTAAAADARSKAKG---SVFSRISFPGGDGNPSDAKRSRRSSSDKPP 956 Query: 328 RPDIEEEEGFVPVISHGRRPGKNRRDRERKAPPRAHK 364 + ++ G++ R R+A A + Sbjct: 957 ASSSSSSKKARAAVAED-NDGRHHRRHHREAAAAAEE 992 >10_01_0073 - 955746-955758,955811-956832 Length = 344 Score = 31.1 bits (67), Expect = 1.6 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 323 LDAPPRPDIEEEEGFVPVISHGRRPGKNRRDRERKAPPRA 362 +D PP P + ++G P + ++P K+ RE APP A Sbjct: 184 IDEPPPPK-KRQQGRQPKVPRAKKPKKSAAPREDGAPPNA 222 >10_01_0072 - 918323-918335,918388-919409 Length = 344 Score = 31.1 bits (67), Expect = 1.6 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 323 LDAPPRPDIEEEEGFVPVISHGRRPGKNRRDRERKAPPRA 362 +D PP P + ++G P + ++P K+ RE APP A Sbjct: 184 IDEPPPPK-KRQQGRQPKVPRAKKPKKSAAPREDGAPPNA 222 >04_04_1257 - 32155935-32156526,32156655-32157067 Length = 334 Score = 30.7 bits (66), Expect = 2.2 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 2/95 (2%) Query: 4 KDLNVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSST--PEPPNSFNDASNISLPT 61 KD +S E + ++ SS + ++++ P PPNS + SN T Sbjct: 217 KDCQLSVLLTKTAEIQRTTLRLSRQLVSSNSNIDDIIHNTNAPPAPPNSAINHSNNIFST 276 Query: 62 NNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQ 96 N+++ R + + SP + + + NQPQ Sbjct: 277 NHSLHRQPQQRVVVDGRSCVSPRPTPGQAKGNQPQ 311 >12_02_0046 + 12830974-12832386 Length = 470 Score = 29.9 bits (64), Expect = 3.8 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 1/65 (1%) Query: 145 SAPPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPPNYASAFDVYVDNPMPRPSRIYN 204 SAPP + A P R M P P TPP +A D + P P P I + Sbjct: 308 SAPPPWCVPPPPRPAPPSRRVMAPLPPYPMDPFETPPSPHAPRHDPFEPPPSPDPP-IQS 366 Query: 205 FGFSP 209 + P Sbjct: 367 YAIDP 371 >08_02_0593 + 19078264-19078609,19078724-19082256 Length = 1292 Score = 29.9 bits (64), Expect = 3.8 Identities = 22/79 (27%), Positives = 30/79 (37%) Query: 283 GGVMAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPPRPDIEEEEGFVPVIS 342 GG A R A G G + +V+ S E + A AE+ + P +E E + Sbjct: 77 GGSGARREDAAGTGRNAVAVVAGGSATSGAERVAARAEDGRRSMDGPTLELSEMMLHAAQ 136 Query: 343 HGRRPGKNRRDRERKAPPR 361 R R R PPR Sbjct: 137 PWRSRCTQRDVRPGAVPPR 155 >02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184, 9020292-9020435,9020552-9020764,9020859-9021929, 9022365-9022391 Length = 1205 Score = 29.9 bits (64), Expect = 3.8 Identities = 14/48 (29%), Positives = 19/48 (39%) Query: 170 IPSPSFIQHTPPPNYASAFDVYVDNPMPRPSRIYNFGFSPMFVSCPEC 217 IP P H P P + +A+ Y P P P +G+ C C Sbjct: 47 IPPPHLYYHGPFPQHPNAYPSYFARPPPYPVDQTAYGYDKFKSHCCGC 94 >03_01_0540 - 4055635-4055743,4055829-4055981,4056037-4056104, 4056486-4056580,4057180-4057241,4057371-4057410, 4058124-4059141,4059231-4059611,4059873-4059880, 4061005-4061067,4061416-4061719 Length = 766 Score = 29.5 bits (63), Expect = 5.0 Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 4/93 (4%) Query: 151 SFVLRQIAARPRTRFMGTFIPSPSFIQHTPPPNYASAFDVYVDNPMPRPSRIYNFGFSPM 210 S VL ++ PR R GT++ ++ +T P D+ D P P FG P Sbjct: 261 SLVLFRVNLSPRPRRSGTYMSPCNYFVYTAGPG-RPWLDLLPD-PNAMPFNSQQFGLFPC 318 Query: 211 FVSCPECGYTGMSIAISQITMSTHMCAFILCLF 243 E + ++ S+ S C F LC F Sbjct: 319 RSGVSE--HYDVAFLNSEWVASDEACQFELCTF 349 >01_01_0224 - 1905978-1907084,1907489-1908070,1908653-1908667 Length = 567 Score = 29.1 bits (62), Expect = 6.6 Identities = 13/25 (52%), Positives = 15/25 (60%) Query: 179 TPPPNYASAFDVYVDNPMPRPSRIY 203 TPPP+ SA + D P PRPS Y Sbjct: 47 TPPPHPLSATEDDADEPRPRPSGRY 71 >11_06_0717 - 26575009-26575152,26576461-26577978 Length = 553 Score = 28.7 bits (61), Expect = 8.8 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 282 SGGVMAARVSAEGAGPSYASVLNFK-GGESNKENIEAHAEEALDAPPRPDIEEEEGFVPV 340 +G ++ +G + A V K GG++ HA LD+ P D + GF+ + Sbjct: 45 AGATRLMEMTTKGRADANAKVNQLKAGGDTKFLPALKHASGLLDSRPAGDKQYRPGFIFL 104 Query: 341 ISHGRRPG 348 +S G+ G Sbjct: 105 LSDGQDNG 112 >07_03_1756 - 29239137-29239325,29239741-29240259,29240693-29240800, 29240856-29241155,29241730-29241831,29243042-29243209, 29243878-29243991,29244184-29244288,29244372-29244502, 29244794-29244918,29245001-29245172,29245277-29245316, 29245636-29245722,29245803-29245868,29246412-29246510, 29246714-29246836,29247066-29247107,29247195-29247260, 29247362-29247553,29247672-29247737,29248839-29249141 Length = 1038 Score = 28.7 bits (61), Expect = 8.8 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%) Query: 279 IRDSGGVMAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPPRPDIEEEEGFV 338 +R G + RVS G + S N G +S EA AE+A+ A D + V Sbjct: 33 LRVLGALRGGRVSTLGRRARFCS--NSAGSDSEAAAAEAKAEDAVAAEGEADGKASSAIV 90 Query: 339 PVI 341 P + Sbjct: 91 PTV 93 >06_03_0138 + 17093196-17093325,17095704-17095804,17096224-17096292, 17096403-17097650,17097763-17097871,17099459-17099655, 17099732-17099842,17099927-17100079 Length = 705 Score = 28.7 bits (61), Expect = 8.8 Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 18/170 (10%) Query: 57 ISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLNEDSVKFTVI 116 +SLP ++ VPS S ++ + + + P++ I + + +T + + T+ Sbjct: 356 VSLPLDSTVPSASSNKPMNIPVPTYLPSSQPPLANIAASAATVAEPVTLVTPGQLLPTIS 415 Query: 117 NIIKTQQ--EMAKMALNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTRFMGTFIPSPS 174 + + + E A + + S S +A + S V + + +F + +PS Sbjct: 416 STVLSADALETASAMIPSPKAASSMVSSSQAALAASSQVTSSVVSPSEDQFASSPVPSHQ 475 Query: 175 FIQ------HTPPPNY-ASAFDVYVDN-----PMPRP----SRIYNFGFS 208 ++ HT P + A V N P P+P S +FGFS Sbjct: 476 QLEQNNEDRHTKKPEWKAKQHSVAPSNKEPLLPAPKPTLQKSHFQSFGFS 525 >04_04_1202 - 31700414-31700854 Length = 146 Score = 28.7 bits (61), Expect = 8.8 Identities = 16/46 (34%), Positives = 23/46 (50%) Query: 286 MAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPPRPDI 331 + AR S E A P +S++ + ++ AEE DAPP P I Sbjct: 6 LVARFSVEVAPPLLSSIIRPRRRRGFPAMLDTIAEEEPDAPPLPAI 51 >04_04_0827 - 28457858-28458028,28458513-28458669,28458984-28459083, 28459204-28459231,28459321-28459396,28461276-28461355, 28461642-28461805,28461897-28462056,28462154-28462277, 28462901-28463941,28464141-28464259,28464512-28464823, 28465222-28465425,28466068-28466751,28467301-28467474 Length = 1197 Score = 28.7 bits (61), Expect = 8.8 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Query: 28 EMASSREIVSHDLNSSTPEPPNSFND--ASNISLPTNNNVP 66 E S +V S +P PN ND + NI P N N+P Sbjct: 661 EQVSHANVVCRHSESGSPRLPNRDNDEKSINIKQPWNTNIP 701 >04_01_0611 - 8029101-8029205,8029985-8030107,8030191-8030556, 8030639-8031124 Length = 359 Score = 28.7 bits (61), Expect = 8.8 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 17/73 (23%) Query: 279 IRDSGGVMAARVSAEGAGPSY-----------ASVLNFKGGESNKE-NIEAHAEEAL--- 323 +R+ G A RV A+GA PSY A+ + +GG + K +E EE Sbjct: 34 VREEGHSYAVRVPADGANPSYYLQYEKPLTNGAASTSSRGGAARKRCRMEEEEEEESSSG 93 Query: 324 --DAPPRPDIEEE 334 + P PDIEE+ Sbjct: 94 EPEPAPDPDIEED 106 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.317 0.131 0.392 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,586,068 Number of Sequences: 37544 Number of extensions: 579081 Number of successful extensions: 1821 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 1805 Number of HSP's gapped (non-prelim): 31 length of query: 404 length of database: 14,793,348 effective HSP length: 84 effective length of query: 320 effective length of database: 11,639,652 effective search space: 3724688640 effective search space used: 3724688640 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 61 (28.7 bits)
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