Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001643-TA|BGIBMGA001643-PA|undefined
(404 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 37 0.034
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 33 0.55
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.72
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044) 31 2.2
SB_23233| Best HMM Match : Mucin (HMM E-Value=2.1) 30 2.9
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_9819| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 3.9
SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16) 30 3.9
SB_22988| Best HMM Match : RVT_1 (HMM E-Value=5.70328e-43) 30 3.9
SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7) 30 3.9
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 30 3.9
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 30 3.9
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 29 5.1
SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17) 29 5.1
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 29 5.1
SB_48385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08) 29 5.1
SB_28998| Best HMM Match : eIF_4EBP (HMM E-Value=4.5) 29 6.7
SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19) 29 6.7
SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.7
SB_52574| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 29 8.9
SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0) 29 8.9
SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_34509| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 29 8.9
SB_4446| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.9
SB_3348| Best HMM Match : Borrelia_orfA (HMM E-Value=0.71) 29 8.9
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 36.7 bits (81), Expect = 0.034
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 3 GKDLNVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTN 62
G D + S F S+ +N +++ +S S+ NS T + S N + S P N
Sbjct: 370 GSDNSSSGNFNSDNSTSDNSNSDNSTSDNSSSDNSNSDNSYT-DNSTSDNSKKDKSNPNN 428
Query: 63 NNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLNEDSVKFTVINIIKTQ 122
+N + S +R +TRIA T T TRI +P+ + + +T + T II T+
Sbjct: 429 SNTDNSSSARITRTRIA----KTRITPTRITRPR-ITRKRITLTRITQTRITRTRIIPTR 483
Score = 29.1 bits (62), Expect = 6.7
Identities = 20/84 (23%), Positives = 32/84 (38%)
Query: 7 NVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVP 66
N +T ++ + DN + + + N+S PE S N SN S N+N
Sbjct: 82 NSNTDNSNSDNSSSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSD 141
Query: 67 SVSLSRSIQTRIASDSPNTSTTKT 90
S SD+ NT + +
Sbjct: 142 DSKPDNSNTNNSNSDNSNTDNSNS 165
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/73 (26%), Positives = 30/73 (41%)
Query: 26 DNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNT 85
DN + + + N+S PE S N SN S N+N S SD+ N+
Sbjct: 287 DNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDNSNS 346
Query: 86 STTKTRINQPQSL 98
+ + + P +L
Sbjct: 347 DNSTSDNSNPDNL 359
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 32.7 bits (71), Expect = 0.55
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 1 MEGKDLNVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNS-FNDASNISL 59
++G N ++ SN N +N ++S +++ N+++ NS N SN +
Sbjct: 349 VDGSMFNSNSNSNSNSNSTSNSNSNNNSNSNSNNNSNNNNNNNSNSNSNSNSNSNSNSNS 408
Query: 60 PTNNNVPSVSLSRSIQTRIASDSPNTSTTKT 90
+N+N S S S S T + + +TT T
Sbjct: 409 NSNSNSNSNSNSNSTVTATTTTTVTVTTTAT 439
Score = 28.7 bits (61), Expect = 8.9
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 10 TQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVS 69
+ F SN N N +++ S+ N+S N+ N SN + +N+N S S
Sbjct: 352 SMFNSNSNSNSNSNSTSNSNSNNNSN-SNSNNNSNNNNNNNSNSNSNSNSNSNSNSNSNS 410
Query: 70 LSRSIQTRIASDSPNTSTTKTRI 92
S S + S+S T+TT T +
Sbjct: 411 NSNS-NSNSNSNSTVTATTTTTV 432
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 32.3 bits (70), Expect = 0.72
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 20 ENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIA 79
+N DN S S + N S ++ N + N ++ NNN + + S + T
Sbjct: 234 DNNNTSDNNNISDNNNTSDNNNISDNNNSDNNNTSDNNNISDNNNSDNNNTSDNNNTSDN 293
Query: 80 SDSPNTSTTKTRINQPQ 96
++S N +T+ + QPQ
Sbjct: 294 NNSDNNNTSDNKHQQPQ 310
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 43 STPEPPNSFNDASNISLPTNNNVPSV-SLSRSIQTRIASDSPNTSTTKTRINQPQS 97
STP P++ + S S+P + PS S ++ T I +P+T +T + + P +
Sbjct: 205 STPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPST 260
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 43 STPEPPNSFNDASNISLPTNNNVPSV-SLSRSIQTRIASDSPNTSTTKTRINQPQS 97
STP P++ + S S+P + PS S ++ T I +P+T +T + + P +
Sbjct: 755 STPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPITPSTPSTPSTPSTPSMPST 810
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 29 MASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSV-SLSRSIQTRIASDSPNTST 87
M S+ S STP PN+ + S S+P+ + PS S + T A +P+T +
Sbjct: 257 MPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPS 316
Query: 88 TKTRINQPQS 97
T + + P++
Sbjct: 317 TPSTPSTPKT 326
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 29 MASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSV-SLSRSIQTRIASDSPNTST 87
M S+ S STP PN+ + S S+P+ + PS S + T A +P+T +
Sbjct: 807 MPSTPSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPS 866
Query: 88 TKTRINQPQS 97
T + + P++
Sbjct: 867 TPSTPSTPKT 876
>SB_53730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 43 STPEPPNSFNDASNISLPTNNNVP-SVSLSRSIQTRIASDSPNTSTTKTRINQPQS 97
++P PNS N ++I+ P + N P S + S + + +SPN+ + N P S
Sbjct: 78 NSPNSPNSPNSPNSINSPNSPNSPNSTNSPNSPNSPNSPNSPNSPNSPNSPNSPNS 133
Score = 29.5 bits (63), Expect = 5.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 41 NSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIAS-DSPNTSTTKTRINQPQS 97
++++P PNS N ++ + P + N P+ S + I S +SPN+ + N P S
Sbjct: 55 STNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSINSPNSPNSPNSTNSPNSPNS 112
Score = 29.1 bits (62), Expect = 6.7
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 43 STPEPPNSFNDASNISLPTNNNVP-SVSLSRSIQTRIASDSPNTSTTKTRINQPQSL 98
++P PNS N ++ + P + N P S + S + + +SPN+ + N P S+
Sbjct: 36 NSPNSPNSPNSPNSPNSPNSTNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSPNSI 92
Score = 28.7 bits (61), Expect = 8.9
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 43 STPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQS 97
++P PNS N ++I+ P + N P + S + + +SPN+ + N P S
Sbjct: 3 NSPNSPNSPNSPNSINSPNSPNSP--NSPNSPNSPNSPNSPNSPNSPNSPNSPNS 55
>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1276
Score = 31.1 bits (67), Expect = 1.7
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 3/99 (3%)
Query: 39 DLNSSTPEPPNSFNDASNISLPTNNNVPSVS--LSRSIQTRIASDSPNTSTTKTRINQPQ 96
D + STP+ P S + A+ + L TN V + + QT A +TT+T+ +
Sbjct: 76 DKSISTPKGPPSGDTATAVELATNTPVVGEADVTPQKTQTTAALTQTQDATTQTQQDAAA 135
Query: 97 SLFIQ-ALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQ 134
Q A T+ +D+ T TQ + AL Q
Sbjct: 136 LTQTQDATTQTQQDAAALTQTQDATTQTQQDAAALTQTQ 174
>SB_57427| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00044)
Length = 1693
Score = 30.7 bits (66), Expect = 2.2
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 87 TTK-TRINQPQSLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMS 145
TTK T NQP L I T N ++ N T + + H +P+S +
Sbjct: 1452 TTKPTCSNQPSKLIINNKTVKNPKAIAIAFNNFFAT---IGSQLASKIPHVDRSPESFLG 1508
Query: 146 APPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPPNYASAFDVYVDNPMPRPSRIYNF 205
P SFVL + A + PS + ++ P Y+ P+ +YN
Sbjct: 1509 PPLVNSFVLSPVTAFEIEDIISGLNPSKASGPYSIPVCLLKFLKSYLSVPL---EILYNH 1565
Query: 206 GFS 208
FS
Sbjct: 1566 SFS 1568
>SB_23233| Best HMM Match : Mucin (HMM E-Value=2.1)
Length = 350
Score = 30.3 bits (65), Expect = 2.9
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 33 REIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRI 92
+EI S T NDA +L T + + S SI T S + T+TT T +
Sbjct: 129 QEICDQYRTSKTKVYLGRTNDAPQTTLSTLTTTTTTTTSSSIATPSTSGTYTTATTTTTV 188
Query: 93 NQPQSLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDD 133
+ S+ + T + S F + I + + + DD
Sbjct: 189 S--SSIATPSTTIVTSPSPSFDELFISRQSLPIVPQVIEDD 227
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 30.3 bits (65), Expect = 2.9
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 7 NVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVP 66
N + SN N N ++S + + NSS+ NS N SN + +N+N
Sbjct: 441 NSKSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSSSSSSSNS-NSNSNSNSNSNSNSN 499
Query: 67 SVSLSRSIQTRIASDSPNTSTTKTRIN 93
S S S S SDS N S + + N
Sbjct: 500 SNSNSNSNSN---SDSNNNSNSNSNSN 523
Score = 29.9 bits (64), Expect = 3.9
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 7 NVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVP 66
N ++ SN N + ++S + + NS++ NS N SN + +NNN
Sbjct: 459 NSNSNSNSNSNSNSNSNSSSSSSSNSNSNSNSNSNSNSNSNSNS-NSNSNSNSDSNNNSN 517
Query: 67 SVSLSRSIQTRIASDSPNTSTTKT 90
S S S S ++ + N++ T T
Sbjct: 518 SNSNSNSNSNSNSNSNSNSTVTVT 541
Score = 28.7 bits (61), Expect = 8.9
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 7 NVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVP 66
N+++ SN N N ++S ++ + NS++ NS N +NI+ +N+N+
Sbjct: 118 NINSNRNSNSSSNSN--SNSNNNSNSNNNINSNSNSNSNSNSNS-NSNNNINSNSNSNIN 174
Query: 67 SVSLSRSIQTRIASDSPNTSTTKT 90
S S S S ++ + + T T
Sbjct: 175 SNSNSNSNSNSNSTVTATVTATAT 198
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 30.3 bits (65), Expect = 2.9
Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 9 STQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSV 68
S+ GS+ N N +SS + + NSS+ +S +++S+ S ++N+ S
Sbjct: 146 SSSSGSSSSSNSNSNSNSNSSSSSNSSSNSNSNSSSSSNSSSNSNSSSNSSSSSNS--SS 203
Query: 69 SLSRSIQTRIASDSPNTSTTKTRINQPQSLFI 100
+ SRS + S+S N+S++ +R + S+ +
Sbjct: 204 NSSRSSSSSSNSNS-NSSSSSSRSSSSSSVAV 234
>SB_9819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 30.3 bits (65), Expect = 2.9
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 64 NVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLNEDSVKFTVINIIKTQQ 123
NVPS LSRS+ I +++ ++T F+ ALTK DS F VI I Q+
Sbjct: 72 NVPSAKLSRSVAEIIRAETEKIKASRTG-------FLSALTKKMNDS-SFVVIGTICGQR 123
Query: 124 E 124
+
Sbjct: 124 D 124
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 3.9
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 28 EMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTST 87
+M SS ++SHD+ T P++F D N S + ++S S+QT +A P T
Sbjct: 357 DMKSSDNLMSHDVQFFT---PSTFPDDKNSS--KQELLKETAVSVSLQTHLAPVVPVTPQ 411
Query: 88 TKTR 91
+ TR
Sbjct: 412 SDTR 415
>SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16)
Length = 411
Score = 29.9 bits (64), Expect = 3.9
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 6/152 (3%)
Query: 9 STQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSV 68
ST FG E E I ED+ A++ EI DL P P S +S+ + V +
Sbjct: 231 STNFGKT-ETGELSIPEDSPKAATGEIEMKDLTLEIPTPRESCQFPGPVSV--SPRVATT 287
Query: 69 SLSRSIQTRIASDSPNTSTTKTRINQPQ-SLFIQALTKLNEDSVKFTVINIIKTQQEMAK 127
I R+ + T++T P S+ + + + ++S K ++ + +
Sbjct: 288 HSPPPISPRVTPEKTPTASTSNGHGIPSASVSLLGILEKKKESPKAPEVSSVSPRPRDEH 347
Query: 128 MALNDDQHTLS--APDSLMSAPPSYSFVLRQI 157
A + + S P+ MS + F+ I
Sbjct: 348 TAKGEPKIVASERKPNVTMSRYSHFDFLANSI 379
>SB_22988| Best HMM Match : RVT_1 (HMM E-Value=5.70328e-43)
Length = 1029
Score = 29.9 bits (64), Expect = 3.9
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 87 TTK-TRINQPQSLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMS 145
TTK T NQP L I T + ++ N T + + H +P+S +
Sbjct: 574 TTKPTCSNQPSKLIINNKTAKDPKAIAIAFNNFFAT---IGSQLASKIPHVDRSPESFLG 630
Query: 146 APPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPPNYASAFDVYVDNPMPRPSRIYNF 205
P SFVL + A + PS + ++ P Y+ P+ +YN
Sbjct: 631 PPLVNSFVLSPVTASEIEDIISGLNPSKASGPYSIPVCLLKFLKSYLSVPL---EILYNH 687
Query: 206 GFS 208
FS
Sbjct: 688 SFS 690
>SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7)
Length = 704
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 276 RTYIRDSGGVMAARVSAEGAGPSYASVLNFKGGESNKENIEAHAEEALDAPPRPDIEEEE 335
R ++ S V A +S AGP S+ + S++ + E+A D +P +EE
Sbjct: 450 RRFLASSSAVSA--LSGVSAGPDDMSIQS-----SSQVSFALDQEDAPDGQHKPPVEETL 502
Query: 336 GFVPVIS 342
GF+P +S
Sbjct: 503 GFIPKLS 509
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 31 SSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKT 90
++ EI ++ S EP +S + S P N PS S S + T +P T T
Sbjct: 296 TTNEIAANGETSGPSEPESSNKSSEPDSTPATNAPPSDSPSTTTPTTPQPPTPTTPKTHP 355
Query: 91 RINQP 95
++ P
Sbjct: 356 QLGPP 360
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 29.9 bits (64), Expect = 3.9
Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Query: 2 EGKDLNVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSF----NDASNI 57
E K + ++ + + VEN + ++ S ++V+ + ST E S D
Sbjct: 247 EEKIVGLTAELDKRGQLVENLEHQISQRPSGNDVVALENKVSTLEQKLSTLQLEKDEEQK 306
Query: 58 SLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLFIQALTKLNEDSVK---FT 114
L T +N L+ ++QT +++ + N + ++ + Q L I LN+ S K
Sbjct: 307 ELQTKHNAALQDLN-NLQTALSAATDNRRQVQEQLKEKQQLVISLQHDLNQVSSKEAESQ 365
Query: 115 VINIIKTQQEMAKMALNDDQHTL 137
+ ++ Q E K L + + T+
Sbjct: 366 QVRNLQNQLEETKRQLENREKTV 388
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.5 bits (63), Expect = 5.1
Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 8/127 (6%)
Query: 26 DNEMASSREIVSHDLNSS-TPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPN 84
DN++ S V+ N+ TP P + + + P+ ++ V + I P
Sbjct: 984 DNQVTPSPSHVTPTSNNQVTPSPSHVTPTSDDHVTPSGKDISPVQS----ELNIVYQDPR 1039
Query: 85 TSTTKTRINQPQSLFIQALTKLNEDSVKF---TVINIIKTQQEMAKMALNDDQHTLSAPD 141
T S+ ++ K+ +D V+ T I T +E K NDD + D
Sbjct: 1040 CREIATVNTLKDSIVLEPAQKIIDDEVQQKGETKIVTAYTPKESGKEITNDDDLSKLGID 1099
Query: 142 SLMSAPP 148
L S PP
Sbjct: 1100 RLTSTPP 1106
>SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)
Length = 722
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 27 NEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTS 86
++ + + S +S P +S NIS + VPS S S SI + +SP+ S
Sbjct: 492 SKQSQKSSVTSKSSSSPKSSPSSSLQRLPNISSALPS-VPSTSSSSSIGGTVRKNSPSAS 550
Query: 87 TTKTRIN 93
+ R++
Sbjct: 551 SLAARVS 557
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 29.5 bits (63), Expect = 5.1
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Query: 7 NVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPT-NNNV 65
N ST+ +N N ++ ++S S + N+ST NS N SN + T NNN
Sbjct: 148 NNSTRNNNNSTSNSNNSTSNSNNSTSNSNNSSNNNNSTS---NSNNSTSNSNNSTRNNNS 204
Query: 66 PSVSLSRSIQTRIASDSPNTST 87
S + + +I +I + + T+T
Sbjct: 205 SSNNNNSTINNKIVATTTTTTT 226
>SB_48385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 30 ASSREIVSHDLNSSTPEP-PNSFNDASNISLPTNNNVPSVS-----LSRSIQTRIASDSP 83
ASS +++D N+S+ P N +N +S S+ +NN S + + S IA+D
Sbjct: 100 ASSTVPIANDYNTSSTAPIANDYNTSSTASIANDNNASSTAPIANDYNASSTAPIANDY- 158
Query: 84 NTSTT 88
NTS+T
Sbjct: 159 NTSST 163
>SB_16949| Best HMM Match : DUF1174 (HMM E-Value=0.08)
Length = 349
Score = 29.5 bits (63), Expect = 5.1
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 24 GEDNEMASSREIVSHDLNSSTP--EPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASD 81
G D + S S+D +S P N +++NI P+N++ S+S++ S R S
Sbjct: 157 GNDRTTSISITHPSNDRTTSISITHPSNDRTNSTNIIHPSNDSTTSISITHSGNDRTTSI 216
Query: 82 SP----NTSTTKTRINQPQS 97
S N TT I P +
Sbjct: 217 STSHPGNDRTTSISITHPSN 236
>SB_28998| Best HMM Match : eIF_4EBP (HMM E-Value=4.5)
Length = 561
Score = 29.1 bits (62), Expect = 6.7
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 47 PPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDS---PNTSTTKTRINQPQSLFIQAL 103
P ++ ND + + + PS+ + IQ RI S S T T K R + +++ +L
Sbjct: 440 PTSTPNDTNEVKGACASESPSLLSAYDIQERINSLSIHPKETRTQKRRRRREKAMLYASL 499
Query: 104 TKLNEDSVKF-------TVINIIKTQQEMAKMALNDDQHTLSAPDSL 143
L+ D+ T +N+ + +AK LN + A + L
Sbjct: 500 RALSNDTTPVNDSKEDNTQVNVTDIDEAIAKAPLNTRKDVSKADEGL 546
>SB_38777| Best HMM Match : Mov34 (HMM E-Value=1.6e-19)
Length = 431
Score = 29.1 bits (62), Expect = 6.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 171 PSPSFIQHTPPPNYASAFDVYVDNP 195
P+ +F+ P P+YAS F V D P
Sbjct: 214 PNETFVVEPPSPSYASLFSVITDAP 238
>SB_22064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 29.1 bits (62), Expect = 6.7
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 25 EDNEMASSREIVS-HDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSP 83
+DNE+ +E++ D +S +PPNS + +S P S SLS R S P
Sbjct: 79 DDNEIGDDKEVILIEDDDSEDLKPPNSNARGTPVSPPNPTPPISSSLSSLPSERQQSQDP 138
Query: 84 N 84
+
Sbjct: 139 S 139
>SB_1948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 959
Score = 29.1 bits (62), Expect = 6.7
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 47 PPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDS---PNTSTTKTRINQPQSLFIQAL 103
P ++ ND + + + PS+ + IQ RI S S T T K R + +++ +L
Sbjct: 842 PTSTPNDTNEVKGACASESPSLLSAYDIQERINSLSIHPKETRTQKRRRRREKAMLYASL 901
Query: 104 TKLNEDSVKF-------TVINIIKTQQEMAKMALNDDQHTLSAPDSL 143
L+ D+ T +N+ + +AK LN + A + L
Sbjct: 902 RALSNDTTPVNDSKEDNTQVNVTDIDEAIAKAPLNTRKDVSKADEGL 948
>SB_52574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 298
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/97 (19%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 9 STQFGSNCEQVENRIGEDN--EMASSREIVS---HDLNSSTPEPPNSF-NDASNISLPTN 62
S++ + Q ++ EDN SS ++++ L SS+ +P ++ ++ P
Sbjct: 183 SSEIDNQSSQSDSESAEDNVEHRRSSLDVITGFFSGLTSSSTDPDRGTESENTHDKSPGQ 242
Query: 63 NNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQSLF 99
++P + ++ I +D + TT++R+ S++
Sbjct: 243 ESIPDDTKQSELECIIEADDNDADTTESRLRASSSIY 279
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 34 EIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRI 92
E S +S P P + + P++ S +L+ ++ T IA+DS T TT T++
Sbjct: 760 ETSSSSASSLAPSPTATTTSTLQTTEPSSTPSTSPALTVTMTTVIATDSSITPTTVTKV 818
>SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1050
Score = 28.7 bits (61), Expect = 8.9
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 7/105 (6%)
Query: 5 DLN-VSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNN 63
D+N +T ++CE + + + A + LNS +FN + P N
Sbjct: 618 DINECATPVTNDCEMICVNVRSSYKCACPTGFI---LNSDNKTCSANFN-VLQLRTPANA 673
Query: 64 NVPSVSLSRSIQTRIASD--SPNTSTTKTRINQPQSLFIQALTKL 106
P+V + +QTR+ S S T T + + + AL KL
Sbjct: 674 TPPTVGVHTPVQTRVGSSGASATRDTCWTAATRLAKILMNALRKL 718
>SB_48325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 28.7 bits (61), Expect = 8.9
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 87 TTK-TRINQPQSLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMS 145
TTK T NQP L I T + ++ N T + + H +P+S +
Sbjct: 523 TTKPTCSNQPSKLIINNKTVKDPKAIAIAFNNFFAT---IGSQLASKIPHVDRSPESFLG 579
Query: 146 APPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPPNYASAFDVYVDNPMPRPSRIYNF 205
P SFVL + A + PS + ++ P Y+ P+ +YN
Sbjct: 580 PPLVNSFVLSPVTAFEIEDIISGLNPSKASGPYSIPVCLLKFLKSYLSVPL---EILYNH 636
Query: 206 GFS 208
FS
Sbjct: 637 SFS 639
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 28.7 bits (61), Expect = 8.9
Identities = 26/110 (23%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 37 SHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQPQ 96
S +L++S+ P S +DA+ S ++ S S + +++SPN ++T R NQ
Sbjct: 611 SGNLSASSSSPSTSVSDAAVSSYLSSKPATDASSSAYDSSISSTESPNETST-VRANQTT 669
Query: 97 SLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSA 146
L + T+ + + +++ + ++ +A + D TLS + SA
Sbjct: 670 VLSNVSATQASHTTSATPFLSLEASPVSVSMVASSTD--TLSVSSFINSA 717
>SB_34509| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 144 MSAPPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHT-----PPPNYASAFDVYVDNPMPR 198
MS+ SF + I +RP R + P+P H PP Y F Y D +
Sbjct: 11 MSSSFQSSFTIDSILSRPTYRPRCSAAPAPCLFSHAYPVIPAPPGYLVGFPRYADVLRSQ 70
Query: 199 PSR 201
P R
Sbjct: 71 PKR 73
>SB_24994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 21 NRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNN-NVPSVSLSRSIQTRIA 79
N + N + I +N++ N+ ASN PT+N P+ + + +TR
Sbjct: 194 NAVQPANNTGNPASITGQPVNTTGHPESNAGQPASNTGQPTSNTGQPANNTGQPARTR-- 251
Query: 80 SDSPNTSTTKTRINQPQS 97
D P T+ ++ P S
Sbjct: 252 -DKPRVLRTRITLSMPHS 268
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 28.7 bits (61), Expect = 8.9
Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 8/148 (5%)
Query: 36 VSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTS------TTK 89
+ L++ TP P+S + S T + P+ S S I + S TS TT
Sbjct: 481 IDTQLSTITPTSPSSITSSDVGSTDTATSTPTSSPSSPITSSDVGGSDTTSSLIIIDTTT 540
Query: 90 TRINQPQSLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMSAP-P 148
+ I ++ + LT + ++ + + + + T+S+ + S P
Sbjct: 541 SGITPTSTISVTTLTTTRTHTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIA 600
Query: 149 SYSFVLRQIAARPRTRFMGTFIPSPSFI 176
S S V+ A P + + T +PS S +
Sbjct: 601 SSSMVMTPTAINP-SATVTTTVPSTSVV 627
>SB_4446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 28.7 bits (61), Expect = 8.9
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 36 VSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPNTSTTKTRINQP 95
+S NS P P + S + + V + S S+ + +D + +T+ +P
Sbjct: 289 ISSSRNSIAPYPYSQSGTKGYQS--SQSGVRKSASSNSLVSLSGNDKSESPSTQVARKKP 346
Query: 96 QSLFIQALTKLNEDS 110
+++F+Q+LT+ +E +
Sbjct: 347 RNIFLQSLTRRDEQT 361
>SB_3348| Best HMM Match : Borrelia_orfA (HMM E-Value=0.71)
Length = 500
Score = 28.7 bits (61), Expect = 8.9
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 87 TTK-TRINQPQSLFIQALTKLNEDSVKFTVINIIKTQQEMAKMALNDDQHTLSAPDSLMS 145
TTK T NQP L I T + ++ N T + + H +P+S +
Sbjct: 225 TTKPTCSNQPSKLIINNKTVKDPKAIAIAFNNFFAT---IGSQLASKIPHVDRSPESFLG 281
Query: 146 APPSYSFVLRQIAARPRTRFMGTFIPSPSFIQHTPPPNYASAFDVYVDNPMPRPSRIYNF 205
P SFVL + A + PS + ++ P Y+ P+ +YN
Sbjct: 282 PPLVNSFVLSPVTAFEIEDIISGLNPSKASGPYSIPVCLLKFLKSYLSVPL---EILYNH 338
Query: 206 GFS 208
FS
Sbjct: 339 SFS 341
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.131 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,013,865
Number of Sequences: 59808
Number of extensions: 619100
Number of successful extensions: 2803
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 2602
Number of HSP's gapped (non-prelim): 217
length of query: 404
length of database: 16,821,457
effective HSP length: 84
effective length of query: 320
effective length of database: 11,797,585
effective search space: 3775227200
effective search space used: 3775227200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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