GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001643-TA|BGIBMGA001643-PA|undefined
         (404 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   1.6  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   2.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    25   2.8  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       25   2.8  
AY341150-1|AAR13714.1|  164|Anopheles gambiae aminopeptidase N p...    25   3.7  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   4.9  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   8.5  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   8.5  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 1.6
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 121  TQQEMAKMA--LNDDQHTLSAPDSLMSAPPSYSFVLRQIAARPRTRFMGTFIPSPSFIQH 178
            T++E +K    ++D   + ++P     +      ++ Q  + P T    TFI  P   Q 
Sbjct: 1573 TRRERSKQGRKVSDQSSSQTSPSKRKDSVTKRDRIILQDESEPNTSQYSTFIHEPKHHQE 1632

Query: 179  TPP 181
             PP
Sbjct: 1633 DPP 1635


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
          protein.
          Length = 755

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 13 GSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSV 68
          G   +Q  +R  +D      +       +S   EPP++F  A++  L T+ +VPS+
Sbjct: 24 GVRVQQHTSRRFKDESFGHDQTPAGSWWSSHLTEPPSNFYQATHGLLQTHPSVPSL 79


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
          protein.
          Length = 753

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 13 GSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSV 68
          G   +Q  +R  +D      +       +S   EPP++F  A++  L T+ +VPS+
Sbjct: 24 GVRVQQHTSRRFKDESFGHDQTPAGSWWSSHLTEPPSNFYQATHGLLQTHPSVPSL 79


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 25.4 bits (53), Expect = 2.8
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 29  MASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIASDSPN-TST 87
           M   R +V+    S+T  PP+     S ++  T    P+ +   + Q    SD+PN T+T
Sbjct: 392 MHEIRSLVNGGTPSTTTMPPSVAPTTSTVAPGTTTTTPTGANPGTTQPP-TSDAPNHTTT 450

Query: 88  TKTRINQP 95
           + T    P
Sbjct: 451 STTTEGNP 458


>AY341150-1|AAR13714.1|  164|Anopheles gambiae aminopeptidase N
           protein.
          Length = 164

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)

Query: 91  RINQPQSLFIQALTKLNED 109
           R+N  ++L+I+ +TKLN D
Sbjct: 127 RVNYDENLWIRLITKLNSD 145


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 3.7
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 30  ASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSIQTRIAS 80
           A S   +SH      P+PP   +   + S+PT+    + + S SI + ++S
Sbjct: 603 AGSSLNLSHPSAGMVPQPPPPGSALGHPSIPTSLAAAAAAYSHSIASTMSS 653


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 4.9
 Identities = 19/104 (18%), Positives = 46/104 (44%), Gaps = 1/104 (0%)

Query: 15  NCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNNVPSVSLSRSI 74
           N +   + + E  ++  +  I    L+  TP P +S   A+ +S+      P  + + ++
Sbjct: 6   NLDSYRHELYEQQQLLGTSPIQYTVLSMDTPSPSSSSAAAAVVSVGEFTLGPGRTYASAL 65

Query: 75  QTRIASDSPNTSTTKTRINQPQSLFIQALTKLNEDSVKFTVINI 118
               +S SP++ ++    N   S  +   +  ++ S  +T+ N+
Sbjct: 66  SPSSSSASPSSPSSVASPNSRAS-NMSPESSASDQSAAYTLQNL 108


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 15/68 (22%), Positives = 32/68 (47%)

Query: 5   DLNVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNN 64
           +LN     GS+       +G  ++ A S  + S  ++S      +S + +S +S    ++
Sbjct: 44  ELNNGAAIGSHQLSAAAGVGLSSQSAQSGSLASGVMSSVPAAGASSSSSSSLLSSSAEDD 103

Query: 65  VPSVSLSR 72
           V  ++LS+
Sbjct: 104 VARITLSK 111


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 8.5
 Identities = 15/68 (22%), Positives = 32/68 (47%)

Query: 5   DLNVSTQFGSNCEQVENRIGEDNEMASSREIVSHDLNSSTPEPPNSFNDASNISLPTNNN 64
           +LN     GS+       +G  ++ A S  + S  ++S      +S + +S +S    ++
Sbjct: 44  ELNNGAAIGSHQLSAAAGVGLSSQSAQSGSLASGVMSSVPAAGASSSSSSSLLSSSAEDD 103

Query: 65  VPSVSLSR 72
           V  ++LS+
Sbjct: 104 VARITLSK 111


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.131    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,173
Number of Sequences: 2123
Number of extensions: 17791
Number of successful extensions: 47
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 12
length of query: 404
length of database: 516,269
effective HSP length: 66
effective length of query: 338
effective length of database: 376,151
effective search space: 127139038
effective search space used: 127139038
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)