Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001642-TA|BGIBMGA001642-PA|IPR001930|Peptidase M1,
membrane alanine aminopeptidase
(544 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 57 4e-08
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 50 5e-06
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910... 50 6e-06
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 37 0.036
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 30 5.4
05_01_0297 - 2314687-2316021 30 5.4
12_01_0828 + 7663958-7664114,7664345-7664479,7664588-7664680,766... 29 9.4
04_03_0939 + 20934694-20935050,20936324-20936519,20936645-20937708 29 9.4
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 56.8 bits (131), Expect = 4e-08
Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 10/222 (4%)
Query: 297 WIRYNVGARGLYRVAPQDRAGEEASDAARVYDGASAAERALILDDAFVLSRAGRLPASXX 356
WI+ NV G YRV+ + A + SAA+R +LDD + L AG+
Sbjct: 535 WIKLNVNQTGFYRVSYDEELASRLRYAIEA-NKLSAADRYGVLDDTYALCMAGKQKLVSL 593
Query: 357 XXXXXXXXGEQHWAPW-RVVLSHMSWWXXXXXXXXXXXXXXXXXXXXH-PPIALRHQRDA 414
E + RV+ + +S P A R DA
Sbjct: 594 LHLIAAYKDETEYTVLARVIDTSLSIVEMVAVAAPEGLGKLKKFLIDFLEPFAQRIGWDA 653
Query: 415 DSDD-HL--WLRGALLASGVEWGNQGITNEAVQLFDLWMEKNHT--IPEIYQEAAFTAGV 469
S + HL LRG LL + E G++ NEAV+ F++++E T +P ++AA+ A +
Sbjct: 654 KSGEGHLDALLRGTLLTALAELGHEATINEAVRRFNIFVEDRETPLLPPDVRKAAYVALM 713
Query: 470 RTHGRVAWRACWRALVDSYSAPRPTYSHRALLAALAS-PEDD 510
+T + + RA + +L+ Y + +L +LAS P+ D
Sbjct: 714 QTVNK-SNRAGYESLLKIYKETDLSQEKVRILGSLASCPDPD 754
Score = 48.8 bits (111), Expect = 1e-05
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 24 DIESATDELSLHKGAAIVSMAIEAAGEETGXXXXXXXXXDHRYASADARDLWRALQRDNP 83
+I+ D +S KGAA++ M G ET Y++A DLW AL+ +
Sbjct: 389 EIDEIFDAISYRKGAAVIRMLQSYLGAETFQKSLAAYIEKFAYSNAKTEDLWAALEEGSG 448
Query: 84 DDASVQAHAWDGWCEKPGYPLLSATTVGDDVILKQERF 121
+ H+ W ++ GYP+++ + ++Q +F
Sbjct: 449 EPVKTLMHS---WTKQQGYPVVNVKLKDGKLEMEQTQF 483
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 50.0 bits (114), Expect = 5e-06
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 23 ADIESATDELSLHKGAAIVSMAIEAAGEETGXXXXXXXXXDHRYASADARDLWRALQRDN 82
++I++ D +S KGA+++ M G E + Y++A DLW L+ ++
Sbjct: 347 SEIDAIFDSISYDKGASVIRMLQSYLGAERFQKALASYIKKYAYSNAKTEDLWAVLEEES 406
Query: 83 PDDASVQAHAWDGWCEKPGYPLLSATTVGDDVILKQERF 121
+ W ++ GYP++ A G D+ L+Q++F
Sbjct: 407 GEPVK---DLMTTWTKQQGYPVIYAKLDGHDLHLEQKKF 442
Score = 37.1 bits (82), Expect = 0.036
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 18/249 (7%)
Query: 293 GKHKWIRYNVGARGLYRVAPQDRAGEEASDAARVYDGASAAERALILDDAFVLSRAGRLP 352
G++ WI+ NV G YRV D A + + S ++ I++D++ LS A +
Sbjct: 466 GENCWIKLNVDQTGFYRVKYDDELAAGLEKAIKA-NKLSLMDKIGIVEDSYSLSVARKQT 524
Query: 353 ASXXXXXXXXXXGEQHWAPWRVVLSHMSWWXXXXXXXXXXXXXXXXXXXXHPPIALR--- 409
+ E + VLSH++ I L
Sbjct: 525 LTSLLRLLNAYRNESDY----TVLSHVTSVCLGIDKISVDATPELSRDIKQLLINLLLSA 580
Query: 410 ------HQRDADSDDHLWLRGALLASGVEWGNQGITNEAVQLFDLWME--KNHTIPEIYQ 461
++ +S + LR LL + V+ G+ NE V+ F ++++ K + +P +
Sbjct: 581 AKTLGWDPKEGESHLDVMLRSLLLIALVKLGHDETINEGVRRFHIFIKDRKTNILPPDTR 640
Query: 462 EAAFTAGVRTHGRVAWRACWRALVDSYSAPRPTYSHRALLAALASPEDDWLFYRFAFTVL 521
+A++ A +RT + RA + AL+ Y +L +L+S D + A +
Sbjct: 641 KASYLAVMRT-VTTSSRAGYDALLKIYRETAEAQEKSRILGSLSSCLDKDIVLE-ALNFM 698
Query: 522 STEAQRGRD 530
T+ R +D
Sbjct: 699 LTDEVRNQD 707
>09_03_0038 +
11790075-11790302,11790397-11790542,11790915-11791017,
11791148-11791334,11791466-11791559,11791702-11791855,
11792189-11792305,11792695-11792808,11793629-11793811,
11794209-11794494,11794592-11794713,11794746-11794802,
11794803-11794900,11795036-11795213,11795355-11795455,
11795530-11795629,11795751-11795828,11796785-11796862,
11796956-11797138
Length = 868
Score = 49.6 bits (113), Expect = 6e-06
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 3/118 (2%)
Query: 4 LRLDSGSTVRAFAALRLERADIESATDELSLHKGAAIVSMAIEAAGEETGXXXXXXXXXD 63
L+LDS + ++++ D +S KGA+++ M G E
Sbjct: 331 LKLDSQAESHPIEVEIHHASEVDEIFDAISYDKGASVIRMLQSYLGAERFQKALTSYIKK 390
Query: 64 HRYASADARDLWRALQRDNPDDASVQAHAWDGWCEKPGYPLLSATTVGDDVILKQERF 121
+ Y++A DLW L+ + + W ++ GYP++S G D+ L+Q++F
Sbjct: 391 YAYSNAKTEDLWAVLEEVSGEPVK---DLMTTWTKQQGYPVISVKLKGHDLELEQDQF 445
>09_03_0039 +
11799277-11799486,11799565-11799710,11800758-11800860,
11800996-11801182,11801299-11801392,11801530-11801683,
11801963-11802067,11802151-11802267,11802688-11802801,
11803171-11803260,11803875-11804057,11809196-11809550,
11809574-11809643,11809993-11810167,11810251-11810351,
11810390-11810516,11810639-11810716,11811926-11812270
Length = 917
Score = 37.1 bits (82), Expect = 0.036
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 64 HRYASADARDLWRALQRDNPDDASVQAHAWDGWCEKPGYPLLSATTVGDDVILKQERF 121
+ Y++A DLW L+ + + + W +K GYP++ G DV L+Q++F
Sbjct: 450 YAYSNAKTEDLWAVLEEVSGEPVK---NLMTTWTKKQGYPVIGVKLKGHDVELEQDQF 504
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 29.9 bits (64), Expect = 5.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 271 RWTENTTHLVWMNDTEMVIPDLG 293
RW + HLV NDT++++ DLG
Sbjct: 454 RWGDPMAHLVKRNDTDLLLEDLG 476
>05_01_0297 - 2314687-2316021
Length = 444
Score = 29.9 bits (64), Expect = 5.4
Identities = 26/88 (29%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 446 FDLWMEKNHTIPEIYQEAAFTAGVRTHGR----VAWRACW-RALVDSYSAPRPTYSHRAL 500
F L + NHT+ + A F V R R W R L+D+ S P P++ HR
Sbjct: 162 FVLAVRVNHTMCDAIGAAQFLLAVGELARGLPAPTVRPAWCRELLDARSPPAPSFPHREF 221
Query: 501 -LAALASPEDDWLFYRFAFTVLSTEAQR 527
+ P D + F FT A R
Sbjct: 222 DVVPPPPPPGDLVTRTFTFTAADVAAIR 249
>12_01_0828 +
7663958-7664114,7664345-7664479,7664588-7664680,
7667122-7668368
Length = 543
Score = 29.1 bits (62), Expect = 9.4
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 281 WMNDTEMVIPD--LGKHKWI-RYNVGARGLYRVAPQDRAGEEASDAARVY 327
+ D ++V+ D +W+ RY RGL R P D A E A+ V+
Sbjct: 258 YCGDVQLVVTDGNAATRRWLARYGAVLRGLSRHVPLDLAAEAAAGGGEVH 307
>04_03_0939 + 20934694-20935050,20936324-20936519,20936645-20937708
Length = 538
Score = 29.1 bits (62), Expect = 9.4
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 463 AAFTAGVRTHGRVAWRACWRALVDSYSAPRPTYSHRALLAALASPEDDWLFYRFAFTVLS 522
AA+ A R GR AW A + Y T S + AA DW+FYRF F +L+
Sbjct: 33 AAYVAERR--GRAAWIVAG-AYLSGYVQQGST-SAPGVRAAAVKLFRDWIFYRFVFPLLA 88
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.133 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,382,383
Number of Sequences: 37544
Number of extensions: 548521
Number of successful extensions: 1120
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1107
Number of HSP's gapped (non-prelim): 13
length of query: 544
length of database: 14,793,348
effective HSP length: 86
effective length of query: 458
effective length of database: 11,564,564
effective search space: 5296570312
effective search space used: 5296570312
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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