Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001641-TA|BGIBMGA001641-PA|IPR001930|Peptidase M1,
membrane alanine aminopeptidase
(541 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces pombe... 66 9e-12
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 37 0.006
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 34 0.058
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 29 2.2
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 28 3.8
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 27 6.6
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 27 6.6
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 27 6.6
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 27 6.6
>SPBC1921.05 |ape2||aminopeptidase Ape2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 882
Score = 66.5 bits (155), Expect = 9e-12
Identities = 84/326 (25%), Positives = 131/326 (40%), Gaps = 45/326 (13%)
Query: 205 GEVSIDLKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVLDYPQADQTYIEFKEK 264
G+V + L V D+ + L+ ++ + AL GS S V Y ++ ++F
Sbjct: 44 GKVVVTLDVLEDSNSITLHGINLRILTAAL--EWGSQTVWASEV-SYGD-ERIVLQFPST 99
Query: 265 IRRKYNYTLSLRFITRLERSDKQRGFFLT------GNQRHRCAVSRFWLTHARSTFPCFD 318
+ L+L F R+ S GF+ + GN ++ A ++ T AR FPC+D
Sbjct: 100 VPANSVAVLTLPFTARI--SSGMEGFYRSSYVDSDGNTKY-LATTQMEPTSARRAFPCWD 156
Query: 319 EPNLRASFKLTIVRDRFHVSLTNMPIVATEEAGFYLGHRLLQDEFATSXXXXXXXXXXXX 378
EP L+A+F + I + L+NM A EE ++D T+
Sbjct: 157 EPALKATFTIDITAKENYTILSNMN--AVEET--------VKDGLKTARFAET------- 199
Query: 379 CRLQRASXXXXXXXXXXXXXXXXXXXXXXXPEISLYTDHPSILQESGPLLEWLQKTIQQF 438
CR+ P + +YT P ++ E KT+ F
Sbjct: 200 CRMSTYLLAWIVAELEYVEYFTPGKHCPRLP-VRVYTT-PGFSEQGKFAAELGAKTLDFF 257
Query: 439 SYELNTSYPLPKFDVVVV-DSANHYSEGWGLIT--LAPATLSD----------TKTIARL 485
S YPLPK D+V + D E WGL+T LA +S+ + +
Sbjct: 258 SGVFGEPYPLPKCDMVAIPDFEAGAMENWGLVTYRLAAILVSEDSAATVIERVAEVVQHE 317
Query: 486 LAQQWFGGLVSPRWWASQWLMEALTS 511
LA QWFG LV+ ++W WL E +
Sbjct: 318 LAHQWFGNLVTMQFWDGLWLNEGFAT 343
>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 612
Score = 37.1 bits (82), Expect = 0.006
Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 7/114 (6%)
Query: 409 PEISLYTDHPSILQESGPLLEWLQKTIQQFSYELNTSYPLPKFDVVVVDSANHY------ 462
P S+YT+ P L E + + + +L Y ++D V++ + Y
Sbjct: 214 PRSSVYTE-PGNLLACKYEFEHDMENFMEAAEQLTLPYCWTRYDFVILPPSFPYGGMENP 272
Query: 463 SEGWGLITLAPATLSDTKTIARLLAQQWFGGLVSPRWWASQWLMEALTSLIAEK 516
+ + TL S+ IA LA W G LV+ W WL E +T + K
Sbjct: 273 NATFATPTLIAGDRSNVNVIAHELAHSWSGNLVTNESWQCFWLNEGMTVFLERK 326
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 33.9 bits (74), Expect = 0.058
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 479 TKTIARLLAQQWFGGLVSPRWWASQWLMEALTSLI 513
TKT+ LA QW G + P+ W+ WL+ L+ I
Sbjct: 382 TKTLTWALASQWIGVYLIPKAWSDLWLIYGLSYYI 416
Score = 30.3 bits (65), Expect = 0.71
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 155 FVIPKHYS-LWLHPNLTTGELRGNTSLRKVLQTIDWHFDCVLAVIHAL------PSTGEV 207
++IPK +S LWL L+ + G L+K++ D+ F V L P +
Sbjct: 397 YLIPKAWSDLWLIYGLSY-YICG-LFLKKLMGNNDYRFRLKKQVYRLLELDIGKPPISQR 454
Query: 208 SIDLKVDRDTT-FVVL-NVRDMNVTERALFKSGGSLGPKISRVL 249
+I++ +D +T F+ L + +++ ER L K+GGSLG +SRV+
Sbjct: 455 NINIPIDPNTLDFIALKSPLVIHILERRLTKTGGSLG--MSRVI 496
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 28.7 bits (61), Expect = 2.2
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 287 QRGFFLTGNQRHRCAVSRFWLTHARSTFPCFDEPNLRASFKLTIVRDRFHVSLTNMPIVA 346
+RG ++G ++ R AVSR L + F FDE A+ L +R + N I
Sbjct: 575 ERGLMISGGEKQRLAVSRLLLKNPEILF--FDE----ATSALDTNTERALLRNINDLIKG 628
Query: 347 TEEAGFYLGHRL 358
+ + ++ HRL
Sbjct: 629 SHKTSVFIAHRL 640
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 154 TFVIPKHYSLWLHPNLTTGELRGNTSLRKVLQTIDWHFDCVLA 196
+ ++P++Y WLH N T G + ++Q I F +LA
Sbjct: 558 SLILPEYYQYWLHSNQTVNLASGG---KAIIQGITSDFGFLLA 597
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 206 EVSIDLKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVLDYPQADQTYIEFKEK 264
E S+ LK R TF + N++D+ E L GSL ++S + P + +E E+
Sbjct: 355 EESLQLKRARYDTFGLGNIKDLEEEEEKLRSVEGSLNEELSEE-EKPAESREQLESAEQ 412
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 264 KIRRKYNYTLSLRFITRLERSDKQRGFFLTGNQRHRCAVSR 304
K+ Y++ ++L + + QRGF ++G Q+ R A++R
Sbjct: 542 KLANAYDFIMTLP--EQFSTNVGQRGFLMSGGQKQRIAIAR 580
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 13 KADRNGSAKAAAWRNMVDQDLDDVAFLAGTYWLVQAGFKVVFRWVKDT 60
K D NG K + + V F AG +WL +G+ W+ T
Sbjct: 394 KLDANGG-KPVPEARLPPMMIGSVLFPAGIFWLAWSGYYTHVHWIVPT 440
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 122 PPTDADNVASSANKERIASNGAVFPWRGARLPTFVIPKH 160
P T ++ +SS +K+R N P GAR P + H
Sbjct: 230 PETTLESFSSSISKKRRRKNAEFTPQAGARSPLILCEGH 268
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.135 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,284,921
Number of Sequences: 5004
Number of extensions: 90447
Number of successful extensions: 199
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 186
Number of HSP's gapped (non-prelim): 15
length of query: 541
length of database: 2,362,478
effective HSP length: 76
effective length of query: 465
effective length of database: 1,982,174
effective search space: 921710910
effective search space used: 921710910
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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