Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001641-TA|BGIBMGA001641-PA|IPR001930|Peptidase M1,
membrane alanine aminopeptidase
(541 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 69 1e-11
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 66 7e-11
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910... 62 1e-09
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 54 4e-07
11_03_0024 - 9035932-9035989,9036190-9036400,9038230-9038638 32 1.0
04_04_1374 - 33028790-33028951,33029033-33029087,33029402-330294... 31 1.8
03_06_0470 + 34164873-34165856,34166335-34166568,34166680-341670... 31 3.1
06_03_1267 - 28851286-28851306,28851452-28851520,28852031-288520... 30 5.4
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 29 7.1
01_06_1617 - 38678668-38678925,38679015-38679117,38680629-38681290 29 7.1
06_03_0772 + 24483314-24486781,24487148-24487240,24488366-24488458 29 9.4
05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422 29 9.4
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 29 9.4
>09_03_0039 +
11799277-11799486,11799565-11799710,11800758-11800860,
11800996-11801182,11801299-11801392,11801530-11801683,
11801963-11802067,11802151-11802267,11802688-11802801,
11803171-11803260,11803875-11804057,11809196-11809550,
11809574-11809643,11809993-11810167,11810251-11810351,
11810390-11810516,11810639-11810716,11811926-11812270
Length = 917
Score = 68.5 bits (160), Expect = 1e-11
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 204 TGEVSIDLKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVLDYPQADQTYIEFKE 263
+GE S+ + V T F+VLN D+ V +RA + G L P + V + + + +EF
Sbjct: 37 SGEASVAVDVSAPTRFLVLNAADLAV-DRASIRFQG-LAP--AEVSVFEEDEILVLEFAG 92
Query: 264 KIRRKYNYTLSLRFITRLERSDKQRGFFLTG----NQRHRCAVSRFWLTHARSTFPCFDE 319
++ L++RF L +D+ RGF+ + + AV++F AR FPC+DE
Sbjct: 93 ELPLGEG-VLAMRFNGTL--NDQMRGFYRSKYEYKGETKNMAVTQFESVDARRCFPCWDE 149
Query: 320 PNLRASFKLTIVRDRFHVSLTNMPIVATEEAG 351
P+ +A FKLT+ V+L+NMPIV + AG
Sbjct: 150 PSFKAKFKLTLEVPSELVALSNMPIVNEKIAG 181
Score = 55.2 bits (127), Expect = 1e-07
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 433 KTIQQFSYELNTSYPLPKFDVVVV-DSANHYSEGWGLITLAPATL--------SDTK--- 480
K++ + +T YPLPK D+V + D N E +GL+T L + TK
Sbjct: 240 KSLNLYKEFFDTPYPLPKLDMVAIPDFTNGAMENYGLVTYREIYLLFDEQSSSASTKQNV 299
Query: 481 --TIARLLAQQWFGGLVSPRWWASQWLMEALTS 511
T+A LA QWFG LV+ WW WL E +
Sbjct: 300 AITVAHELAHQWFGNLVTMEWWTHLWLNEGFAT 332
Score = 29.9 bits (64), Expect = 5.4
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 143 AVFPWRG-ARLPTFVIPKHYSLWLHPNLTTGELRGNTSL 180
A +RG ARLP F P+ Y L L P+L G S+
Sbjct: 4 AAAEFRGQARLPRFAAPRRYELRLRPDLAACVFSGEASV 42
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 66.1 bits (154), Expect = 7e-11
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 13/156 (8%)
Query: 204 TGEVSIDLKVDRDTTFVVLNVRDMNVTERAL-FKSGGS---LGPKISRVLDYPQADQTYI 259
TG V + + V T F+VLN ++ V+ + FK G+ L P + V + P+ + I
Sbjct: 40 TGSVDVSVDVTAPTRFLVLNAAELEVSPGGVQFKPHGAEQELHP--AEVTNVPEDEILII 97
Query: 260 EFKEKIRRKYNYTLSLRFITRLERSDKQRGFFLT----GNQRHRCAVSRFWLTHARSTFP 315
F E + TL + F L +DK GF+ + ++ AV++F AR FP
Sbjct: 98 RFNEVLPVGEG-TLVIAFKGTL--NDKMHGFYRSVYELNGEKKNMAVTQFEPADARRCFP 154
Query: 316 CFDEPNLRASFKLTIVRDRFHVSLTNMPIVATEEAG 351
C+DEP+ +A FK+T+ V+L+NMP+V + G
Sbjct: 155 CWDEPSFKAIFKITLEVPSETVALSNMPVVEEKVNG 190
Score = 54.8 bits (126), Expect = 2e-07
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 428 LEWLQKTIQQFSYELNTSYPLPKFDVVVV-DSANHYSEGWGLITLAP-ATLSDTK----- 480
LE KT+ F YPLPK D++ + D A+ E +GL+T A L D K
Sbjct: 244 LEVAVKTLVLFKEYFAVPYPLPKMDMIAIPDFASGAMENYGLVTYRETALLFDEKHSAAA 303
Query: 481 -------TIARLLAQQWFGGLVSPRWWASQWLMEALTSLIA 514
+A LA QWFG LV+ WW WL E + ++
Sbjct: 304 NKQRVAVVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVS 344
>09_03_0038 +
11790075-11790302,11790397-11790542,11790915-11791017,
11791148-11791334,11791466-11791559,11791702-11791855,
11792189-11792305,11792695-11792808,11793629-11793811,
11794209-11794494,11794592-11794713,11794746-11794802,
11794803-11794900,11795036-11795213,11795355-11795455,
11795530-11795629,11795751-11795828,11796785-11796862,
11796956-11797138
Length = 868
Score = 61.7 bits (143), Expect = 1e-09
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 204 TGEVSIDLKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVLDYPQADQTYIEFKE 263
TG+ S+ + V T F+VLN D+ V +RA + G L P + V + + +EF
Sbjct: 43 TGDASVVVDVSAPTRFLVLNAADLAV-DRASIRFQG-LAP--TEVSLFEDDEILVLEFDG 98
Query: 264 KIRRKYNYTLSLRFITRLERSDKQRGFFLTG----NQRHRCAVSRFWLTHARSTFPCFDE 319
++ L++ F L +D+ RGF+ + + AV++F AR FPC+DE
Sbjct: 99 ELPLGEG-VLAMDFNGTL--NDQMRGFYRSKYEYKGETKNMAVTQFEAVDARRCFPCWDE 155
Query: 320 PNLRASFKLTIVRDRFHVSLTNMPIVATEEAG 351
P +A FKLT+ V+L+NMP+ AG
Sbjct: 156 PAFKAKFKLTLEVPSELVALSNMPVACETIAG 187
Score = 31.9 bits (69), Expect = 1.3
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 433 KTIQQFSYELNTSYPLPKFDVVVV-DSANHYSEGWGLITLAPATL 476
K++ + +T YPLPK D+V + D A E +GL+T +L
Sbjct: 246 KSLNFYKDYFDTPYPLPKLDMVAIPDFAAGAMENYGLVTYREVSL 290
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 53.6 bits (123), Expect = 4e-07
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 204 TGEVSIDLKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVLDYPQADQTYIEFKE 263
+G ++ + V T F+VLN ++ V GS S V+ + + + I F +
Sbjct: 37 SGSAAVAVAVSAPTRFLVLNAAELAVD--------GSSDLVPSEVVQFEEDEIVVIGFGQ 88
Query: 264 KIRRKYNYTLSLRFITRLERSDKQRGFFLTG----NQRHRCAVSRFWLTHARSTFPCFDE 319
+ L + F L +D+ RGF+ + + AV++F AR FPC+DE
Sbjct: 89 DLPIGEG-VLKMDFTGTL--NDQMRGFYRSKYEYKGESRNMAVTQFEAADARRCFPCWDE 145
Query: 320 PNLRASFKLTIVRDRFHVSLTNMPIV 345
P +A FKLT+ V+L+NMP++
Sbjct: 146 PAFKAKFKLTLEVPSELVALSNMPVI 171
Score = 31.9 bits (69), Expect = 1.3
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 433 KTIQQFSYELNTSYPLPKFDVVVV-DSANHYSEGWGLITLAPATL 476
K++ F T YPLPK D+V + D A E +GL+T L
Sbjct: 236 KSLDLFKDYFATPYPLPKLDMVAIPDFAAGAMENYGLVTYRETAL 280
>11_03_0024 - 9035932-9035989,9036190-9036400,9038230-9038638
Length = 225
Score = 32.3 bits (70), Expect = 1.0
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 159 KHYSLWLHPNLTTGELRGNTSLRKVLQTIDWHFDCVLAV-IHALPSTGEVSIDL 211
K Y L + ++ G L T ++V Q I W FDC V + +P + +DL
Sbjct: 126 KRYKLDVSVSMGFGGLGKTTLAKQVYQKIKWQFDCAAFVFVSQMPDMKRILLDL 179
>04_04_1374 -
33028790-33028951,33029033-33029087,33029402-33029466,
33029558-33029701,33029825-33029878,33029971-33030220,
33030340-33030446,33031206-33031216,33032682-33032796,
33032897-33033005,33033088-33033203,33033288-33033647
Length = 515
Score = 31.5 bits (68), Expect = 1.8
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 94 FATSLLVVYASPQPECPCAEETTLIVGQPPTDADNVASSANKERIASNGAVFPWRGARLP 153
+ +L +Y S A + + P + + A+ ++AS+ + PWRG RL
Sbjct: 73 YTRGILHLYRSSSSSSSTASYASAVAATPSSSSSGPAAP----QLASDCLLPPWRGTRLL 128
Query: 154 TFVIPKHYS 162
+P H S
Sbjct: 129 VLAVPTHVS 137
>03_06_0470 +
34164873-34165856,34166335-34166568,34166680-34167006,
34168426-34168716
Length = 611
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 309 HARSTFPCFDEPNLRASFKLTI 330
HARS FPC D P R +F L +
Sbjct: 134 HARSVFPCHDTPAARITFDLLL 155
>06_03_1267 -
28851286-28851306,28851452-28851520,28852031-28852066,
28852381-28852486,28852869-28852997,28853685-28853797,
28853907-28853993,28854106-28854543
Length = 332
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 237 SGGSLGPKISRVLDYPQADQTYIEFKEKIRRKYNYTLSLRFITRLE---RSDKQRGFFLT 293
SG S S+ L++P + + F+EK R++ N+ +R+ R E R + RG F +
Sbjct: 165 SGASSSAPYSKRLNFPHRVASLMRFREK-RKERNFDKKIRYSVRKEVALRMQRNRGQFTS 223
Query: 294 GNQR 297
+
Sbjct: 224 SKPK 227
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 478 DTKT-IARLLAQQWFGGLVSPRWWASQWLMEALTSLIAE 515
DT+ +A LA+QWFG + +WL++ L + E
Sbjct: 493 DTRIKVAYALARQWFGIYTNAEEATDEWLLDGLAGFLTE 531
>01_06_1617 - 38678668-38678925,38679015-38679117,38680629-38681290
Length = 340
Score = 29.5 bits (63), Expect = 7.1
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 118 IVGQPPTDADNVASSANKERIASNGAVFPWRGARLPTFVIPKHYSLWLHPNLTTGELRGN 177
I G PP + + + AV PWRGA L V + W P+L E G
Sbjct: 44 IHGAPPAPEAAILEERVEVDVDVEAAVVPWRGAFLFP-VAAAVVASWPLPSL-AAEAGGK 101
Query: 178 TSLRKVLQTID 188
SL ++ ID
Sbjct: 102 VSLESIVVAID 112
>06_03_0772 + 24483314-24486781,24487148-24487240,24488366-24488458
Length = 1217
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 491 FGGLVSPRWWASQWLMEALTSLIAE 515
+ GL SP W+ + W M+ALTS+I E
Sbjct: 779 YKGLRSPTWFETNW-MKALTSVILE 802
>05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422
Length = 259
Score = 29.1 bits (62), Expect = 9.4
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 415 TDHPSILQESGPLLEWLQKTIQQFSYELNTSYPLPKFDVVVVDSANHYSEGWGLITLAPA 474
T+ + + PL + ++KT++ SY L S D +VVD + + + L P
Sbjct: 107 TEEDTTSEALAPLSDDVKKTLEDISYRLEAS----SLDSLVVDCGSIRARLHEVQALIPE 162
Query: 475 TLSDTKTIARLLAQQWF 491
L+D T A Q F
Sbjct: 163 ELTDVLTPAAYFEQHQF 179
>01_05_0212 +
19347142-19347444,19348853-19348907,19349117-19349292,
19350033-19350254,19350359-19350597,19351100-19351625,
19351707-19351980,19352166-19352225,19352362-19353025,
19353747-19353975,19354071-19354337,19354414-19354602,
19354771-19355415
Length = 1282
Score = 29.1 bits (62), Expect = 9.4
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Query: 202 PSTGEVSID-LKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVLDYPQADQTYIE 260
P +GEV ID + + R + + E LF S I + Y + DQT E
Sbjct: 435 PQSGEVLIDGIDIRRMNLGWIRGKISLVSQEPVLFSS------TIRENIAYGKEDQTLEE 488
Query: 261 FKEKIRRKYNYTLSLRFITRLERSDKQRGFFLTGNQRHRCAVSRFWLTHAR 311
K + + LE +RG L+G Q+ R A++R + + R
Sbjct: 489 IKRAVELANAAKFVDKLPNGLETMVGERGIQLSGGQKQRIAIARAIIKNPR 539
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.135 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,985,541
Number of Sequences: 37544
Number of extensions: 595411
Number of successful extensions: 1230
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1208
Number of HSP's gapped (non-prelim): 24
length of query: 541
length of database: 14,793,348
effective HSP length: 86
effective length of query: 455
effective length of database: 11,564,564
effective search space: 5261876620
effective search space used: 5261876620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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