Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001641-TA|BGIBMGA001641-PA|IPR001930|Peptidase M1,
membrane alanine aminopeptidase
(541 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 78 2e-14
SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 65 2e-10
SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 64 4e-10
SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 56 7e-08
SB_32141| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 1e-07
SB_54833| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-06
SB_28575| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-07) 48 1e-05
SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08) 48 3e-05
SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 45 2e-04
SB_35142| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-13) 42 0.001
SB_41061| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_45004| Best HMM Match : Peptidase_M1 (HMM E-Value=0.0054) 41 0.003
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07) 38 0.015
SB_16863| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.047
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 36 0.11
SB_45006| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.11
SB_7564| Best HMM Match : Peptidase_M1 (HMM E-Value=6.8e-08) 31 3.1
SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041) 30 4.1
SB_34640| Best HMM Match : Phosphodiest (HMM E-Value=1.4e-34) 30 5.4
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 29 7.2
SB_52549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_47737| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
>SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 1240
Score = 77.8 bits (183), Expect = 2e-14
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 204 TGEVSIDLKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVLDYPQADQTYIEFKE 263
+G VS+ +K + DT ++ ++ + M +T+ + G KI + + + I+ K
Sbjct: 157 SGNVSVRVKCNEDTDYIFIHAKQMRLTKFEVLNQGKE-PLKIMETANCEKLEMFSIKVKG 215
Query: 264 KIRRKYNYTLSLRFITRLERSDKQRGFFLT------GNQRHRCAVSRFWLTHARSTFPCF 317
+++ +Y L + F L ++K GF+ + GN R+ A + F T AR+ FPCF
Sbjct: 216 GLKKGESYVLQIDFNAVL--AEKLTGFYKSSYKDKDGNTRY-LATTHFEPTDARAAFPCF 272
Query: 318 DEPNLRASFKLTIVRDRFHVSLTNMPIVAT 347
DEP L+A F + I R HVSL+NMPI T
Sbjct: 273 DEPALKAVFNMVIYRKAEHVSLSNMPIKET 302
Score = 46.8 bits (106), Expect = 4e-05
Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 13/99 (13%)
Query: 449 PKFDVVVVDSANHYSEGWGLITLAPATL--------SDTK-----TIARLLAQQWFGGLV 495
P + + + D E WGLIT +L D K +A LA QWFG LV
Sbjct: 567 PPYLIAIPDFPTGAMENWGLITYRMTSLLYRPGFSSDDNKQWISVVVAHELAHQWFGNLV 626
Query: 496 SPRWWASQWLMEALTSLIAEKAPPFKNSALKQEEALLLD 534
+ +WW WL E S + + E LLD
Sbjct: 627 TMKWWNDLWLNEGFASFVENIGVNHTTPEWRMMEQFLLD 665
Score = 32.7 bits (71), Expect = 0.77
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 446 YPLPKFDVVVV-DSANHYSEGWGLITLAPATLSDTKTIARLLAQQWFGGLVS 496
YPLPK D++ + D A E WGLIT +L ++ +QW +V+
Sbjct: 380 YPLPKQDLIAIPDFAAGAMENWGLITYRLTSLLYDPEVSSDSNKQWVAVVVA 431
>SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 890
Score = 64.9 bits (151), Expect = 2e-10
Identities = 45/145 (31%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 205 GEVSIDLKVDRDTTFVVLNVRDMNVTERALFKSG--GSLGPKISRVLDYPQADQTYIEFK 262
G+V I + V + T ++++ R +NV++ + K+G GSLG I + + + +Q Y+
Sbjct: 129 GKVDIYINVFKATKIIIVHNRRLNVSDIDIRKTGSQGSLG--IRQHFPFKK-NQFYVMEA 185
Query: 263 EKIRRKYNYTLSLR---FITRLERSDKQRGFFLTGNQRHRCAVSRFWLTHARSTFPCFDE 319
E+ Y +S+ F ++ R + F QR ++F AR FPCFDE
Sbjct: 186 EQSLEPSLYVVSISYKGFYSKGLRGFYRSSFTQNNGQRVYFVATQFEPVKAREAFPCFDE 245
Query: 320 PNLRASFKLTIVRDRFHVSLTNMPI 344
P ++A+F +TI +V+L+NMPI
Sbjct: 246 PGMKATFNITIAHRPDYVALSNMPI 270
Score = 39.1 bits (87), Expect = 0.009
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 489 QWFGGLVSPRWWASQWLMEALTSLIAEKAPPFKNSALKQEEALLLDHVLPAL 540
+WFG +V+ WW WL EA +L+A K + ++ L+D V A+
Sbjct: 314 KWFGNIVTMAWWDDLWLNEAFATLMAYKGADAAEPSWHVDQHFLVDTVEVAM 365
>SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 854
Score = 63.7 bits (148), Expect = 4e-10
Identities = 61/207 (29%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 146 PWRGARLPTFVIPKHYSLWLHPNLTTGELRGNTS-LRKVLQTIDWHFDCVLAVIHALPST 204
PW RLPT VIP HY L+LHPNLTTG G L VLQ ++ ++H T
Sbjct: 89 PWYKVRLPTNVIPVHYDLFLHPNLTTGTFEGEVEILVDVLQETEY------ILVHTNGMT 142
Query: 205 GEVSIDLKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVLDYPQADQTYIEFKEK 264
S + +++ L V++M + F + K+S V Y F +
Sbjct: 143 VSKSSVHEATKESQKEPLAVKEM-FEYKENFYYVFIMSEKLS-VGRYIVRMDYRAPFSSE 200
Query: 265 IRRKYNYTL-SLRFITRLERSD-KQRGF-FLTGNQRHRCAVSRFWLTHARST-----FPC 316
+ Y T R + D +GF + + + + T T PC
Sbjct: 201 LNGFYLSTYKDKRVFPYAKHGDGHNQGFKAIVSKAAFKLRIPKLATTKFEPTDARKALPC 260
Query: 317 FDEPNLRASFKLTIVRDRFHVSLTNMP 343
FDEP ++A+F TIV + + +LTNMP
Sbjct: 261 FDEPAMKATFTTTIVHEPDYTALTNMP 287
>SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 904
Score = 56.0 bits (129), Expect = 7e-08
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 190 HFDCVLAVI-HALPSTGEVSIDLKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRV 248
H++ L +I L TG I L V + T ++++ MNVT ++ G I +
Sbjct: 249 HYNVYLNIILKELRFTGTSEIHLNVTQSTDLILVHSARMNVTSGSVMNKAGDQ-QAIKKR 307
Query: 249 LDYPQADQTYIEFKEKIRRKYNYTLSLRFITRLERSDKQRGFFLT-----GNQRHRCAVS 303
+ + T ++ + + Y + L F L SD+ G + + + A +
Sbjct: 308 FWFEKNQFTVLQMETALEPG-PYVVMLGFEAFL--SDQLNGLYRSQYTHKDGKNVTIATT 364
Query: 304 RFWLTHARSTFPCFDEPNLRASFKLTIVRDRFHVSLTNMPIVATE 348
+F T AR FPC DEP L+A+F +TI ++++NMPI E
Sbjct: 365 QFQPTDARKAFPCLDEPALKATFNITIEHRPDFIAISNMPIWKNE 409
Score = 37.9 bits (84), Expect = 0.020
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 433 KTIQQFSYELNTSYPLPKFDVVVV-DSANHYSEGWGLITLAPATL 476
K + F + N SYPLPK D++ + D A E WGL+T L
Sbjct: 471 KILDDFEHYYNISYPLPKADMIAIPDFAAGAMENWGLMTYRETAL 515
>SB_32141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 55.2 bits (127), Expect = 1e-07
Identities = 26/47 (55%), Positives = 31/47 (65%)
Query: 301 AVSRFWLTHARSTFPCFDEPNLRASFKLTIVRDRFHVSLTNMPIVAT 347
A + F T AR+ FPCFDEP L+A F + I R HVSL+NMPI T
Sbjct: 43 ATTHFEPTDARAAFPCFDEPALKAVFNMVIYRKAEHVSLSNMPIKET 89
>SB_54833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 52.0 bits (119), Expect = 1e-06
Identities = 25/45 (55%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 146 PWRGARLPTFVIPKHYSLWLHPNLTTGELRGNTS-LRKVLQTIDW 189
PW RLPT VIP HY L+LHPNLTTG G L VLQ ++
Sbjct: 64 PWYKVRLPTNVIPVHYDLFLHPNLTTGTFEGEVEILVDVLQETEY 108
>SB_28575| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-07)
Length = 287
Score = 48.4 bits (110), Expect = 1e-05
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 14/95 (14%)
Query: 433 KTIQQFSYELNTSYPLPKFDVVVV-DSANHYSEGWGLITLAPATL---SDTKT------- 481
K + ++ YPLPK D++ + D E WGL+ L DT +
Sbjct: 14 KVLPFYAQYFGIDYPLPKADMIALPDFVFRAMENWGLVMYREENLLWREDTSSEVHKQYV 73
Query: 482 ---IARLLAQQWFGGLVSPRWWASQWLMEALTSLI 513
++ LA QWFG LV+ WW WL E S +
Sbjct: 74 GELVSHELAHQWFGNLVTMTWWDDLWLNEGFASYV 108
>SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08)
Length = 326
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 301 AVSRFWLTHARSTFPCFDEPNLRASFKLTIVRDRFHVSLTNMPI 344
A ++F + AR FPC DEP L+A+F +TI +V+L NMPI
Sbjct: 215 AATQFERSDARKAFPCLDEPALKATFNVTIAHHARYVALCNMPI 258
>SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 791
Score = 44.8 bits (101), Expect = 2e-04
Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 15/107 (14%)
Query: 433 KTIQQFSYELNTSYPLPKFDVVVVDSANHYSEGWGLI------TLAPATLSDTKTIARLL 486
+++ Q YPLPK D++ E WGLI L S+ + LL
Sbjct: 241 ESLNQLEQFFGIPYPLPKLDLIATPECLVAMENWGLIHMEEDGLLYKEEFSNEEIKQNLL 300
Query: 487 --------AQQWFGGLVSPRWWASQWLMEALTSLI-AEKAPPFKNSA 524
A WFG LV+ WW WL EA +A P N A
Sbjct: 301 IRWLPHEIAHMWFGNLVTMSWWDDLWLNEAFADYYNYHEASPISNMA 347
Score = 39.5 bits (88), Expect = 0.007
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 309 HARSTFPCFDEPNLRASFKLTIVRDRFHVSLTNMPIVATEEAGFYLGHRLLQDEFATS 366
+AR+ FPCFDEP L+A+F TI + TN V++ G L FATS
Sbjct: 140 YARTAFPCFDEPALKATFNTTITHPSDMQAFTNGAQVSSAPKG-----NLTMTSFATS 192
>SB_35142| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-13)
Length = 302
Score = 42.3 bits (95), Expect = 0.001
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 204 TGEVSIDLKVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVLDYPQADQTYIEFKE 263
TG+ +ID+KV ++T ++VL+ + + + L KI+R+L + +Q +E K+
Sbjct: 116 TGKAAIDIKVVKNTKYIVLHSKKLKIKSYRLVNDKKE-NVKIARMLLNEKLEQLLLEPKQ 174
Query: 264 KIRRKYNYTLSLRFITRLERSDKQRGFFLTGNQRHRCAVSRFW 306
+ + +T+ L F L S+K GF+ + + R R W
Sbjct: 175 GLVKGQKFTIKLEFSGEL--SNKMAGFY-KSSYKTRNGEVRVW 214
Score = 32.7 bits (71), Expect = 0.77
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 443 NTSYPLPKFDVVVV-DSANHYSEGWGLIT 470
N YPLPK D+V V D A E WGL+T
Sbjct: 242 NIPYPLPKIDLVAVPDFAAGAMENWGLMT 270
Score = 31.1 bits (67), Expect = 2.3
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 82 AVCLTVL-AFATIFATSLLVVYASPQPECPCAEETTLIVGQPPTDADNVASSANKERIAS 140
A+ LT L AF + VY S + + + + SSA + +
Sbjct: 15 AISLTFLIAFGGMTIFVFTAVYRSSEQDMNLYRRAASYFTDKIEEIHHKFSSAGQGKFER 74
Query: 141 NGAV------FPWRGARLPTFVIPKHYSLWLHPNLT 170
NG FP + RLP V+P Y+L +HP L+
Sbjct: 75 NGRSVVSNDDFPHKDIRLPKDVVPTKYTLTMHPVLS 110
>SB_41061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 41.1 bits (92), Expect = 0.002
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 479 TKTIARLLAQQWFGGLVSPRWWASQWLMEALTSLIAEKA 517
T IA L QWFG +V+ +WW WL E KA
Sbjct: 42 TSVIAHELVHQWFGNIVTLKWWNDMWLNEGFAKFFEYKA 80
>SB_45004| Best HMM Match : Peptidase_M1 (HMM E-Value=0.0054)
Length = 236
Score = 40.7 bits (91), Expect = 0.003
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 292 LTGNQRHRCAVSRFWLTHARSTFPCFDEPNLRASFKLTI 330
+ N S+F ARS FPCFDEP +A+F LTI
Sbjct: 62 IADNATRSYVASQFGPAEARSVFPCFDEPAFKATFNLTI 100
>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
Length = 1844
Score = 38.3 bits (85), Expect = 0.015
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 418 PSILQE-SGPLLEWLQKTIQQFSYELNTSYPLPKFDVVVVDS--ANHYSEGWGLITLAPA 474
PSI+ S LL ++ I+ S EL YP + D++++ A + L+ L+ +
Sbjct: 1468 PSIIDRASDELLSYVPGFIEA-SCELLGPYPFSRLDLLILPKCFACMGLKNPNLVFLSQS 1526
Query: 475 TLSDTKTI----ARLLAQQWFGGLVSPRWWASQWLMEALTSLIAEK 516
L+ +I A ++ WFG L+ + W +WL E ++ I E+
Sbjct: 1527 VLAGDGSIRVRVAHEISHAWFGLLIGAKDWTEEWLSEGFSTYIEER 1572
>SB_16863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 36.7 bits (81), Expect = 0.047
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 301 AVSRFWLTHARSTFPCFDEPNLRASFKLTI 330
A ++F + AR FPC DEP L+A+F +TI
Sbjct: 9 AATQFERSDARKAFPCLDEPALKATFNVTI 38
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 35.5 bits (78), Expect = 0.11
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 128 NVASSANKERIASNGAVFPWRGARLPTFVIPKHYSLWLHPNLTTGELRGNTSLRKVLQTI 187
N + SA+ I + W RLPT VIP +Y L+L N+ G+ + +L T+
Sbjct: 1423 NPSPSASTNPIPTTPGTEAWWNFRLPTNVIPNNYDLYLDVNMKKKNYTGSVN---ILVTV 1479
Query: 188 DWHFDCVLAVIHALPSTGEVSIDLKVDRDT 217
D L ++H S V+ + +D+D+
Sbjct: 1480 TQSTD--LVILHCKGSL-RVTQVVVIDKDS 1506
>SB_45006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 35.5 bits (78), Expect = 0.11
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 128 NVASSANKERIASNGAVFPWRGARLPTFVIPKHYSLWLHPNLTTGELRGNTSLRKVLQTI 187
N + SA+ I + W RLPT VIP +Y L+L N+ G+ + +L T+
Sbjct: 9 NPSPSASTNPIPTTPGTEAWWNFRLPTNVIPNNYDLYLDVNMKKKNYTGSVN---ILVTV 65
Query: 188 DWHFDCVLAVIHALPSTGEVSIDLKVDRDT 217
D L ++H S V+ + +D+D+
Sbjct: 66 TQSTD--LVILHCKGSL-RVTQVVVIDKDS 92
>SB_7564| Best HMM Match : Peptidase_M1 (HMM E-Value=6.8e-08)
Length = 457
Score = 30.7 bits (66), Expect = 3.1
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 293 TGNQRHRCAVSRFWLTHARSTFPCFDEPNLRASF--KLTIVRD 333
T ++H ++ HARS PC D P ++A++ K+++ +D
Sbjct: 73 TSGKKHPYMFTQCQAIHARSIIPCQDSPGVKATYSAKVSVPKD 115
>SB_1013| Best HMM Match : Peptidase_M1 (HMM E-Value=0.041)
Length = 999
Score = 30.3 bits (65), Expect = 4.1
Identities = 22/116 (18%), Positives = 47/116 (40%), Gaps = 12/116 (10%)
Query: 409 PEISLYTDHPSILQESGPLLEWLQKTIQQFSYELNTSYPLPKFDVVVVDSANHYSEGWGL 468
PE++ + P +L +L + + L+ YP + V VD A +
Sbjct: 145 PEVTNFC-LPGLLANLKHSTAFLHDVFEMYEENLSCRYPYTHYKQVFVDQAYSVKAAYAS 203
Query: 469 ITLAPATLSDT-----------KTIARLLAQQWFGGLVSPRWWASQWLMEALTSLI 513
+++ +L + + +A+ LA+Q+FG + + W+ WL + +
Sbjct: 204 MSIFNTSLLHSSRIIDQTFITRRVLAQALAEQFFGCYICMQDWSDAWLCSGIAGYL 259
>SB_34640| Best HMM Match : Phosphodiest (HMM E-Value=1.4e-34)
Length = 253
Score = 29.9 bits (64), Expect = 5.4
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 202 PSTGEVSIDL-KVDRDTTFVVLNVRDMNVTERALFKSGGSLGPKISRVL 249
P + EV I + KVD T ++V ++ ++ E+ + GG+LG I+ +L
Sbjct: 154 PESEEVVIAIRKVDTITGYLVKQLQKRHLLEKVSLEEGGTLGDLITAIL 202
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 29.5 bits (63), Expect = 7.2
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 470 TLAPATLSDTKTIARLLAQQWFGGLVSPRWWASQWLME 507
T +PA S + + R + WF G SPR+ A++WL +
Sbjct: 1479 TESPAPSSTS--LNRFTERDWFSGKFSPRYSAARWLSD 1514
>SB_52549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.1 bits (62), Expect = 9.5
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 247 RVLDYPQADQTY-IE-FKEKIRRKYNYTLSLRFITRLERSDKQRGFFLTGNQ 296
+VL++P+ + T +E F EK R+ YN T+ L F + ++ F L NQ
Sbjct: 136 QVLEFPEPNSTNRLEYFNEKPRQIYNITVCLWFQASKQSTESSTVFSLATNQ 187
>SB_47737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.1 bits (62), Expect = 9.5
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 247 RVLDYPQADQTY-IE-FKEKIRRKYNYTLSLRFITRLERSDKQRGFFLTGNQ 296
+VL++P+ + T +E F EK R+ YN T+ L F + ++ F L NQ
Sbjct: 66 QVLEFPEPNSTNRLEYFNEKPRQIYNITVCLWFQASKQSTESSTVFSLATNQ 117
>SB_12446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 29.1 bits (62), Expect = 9.5
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 83 VCLTVLAFATIFATSLLVVYASPQPECPCAEETTLIVGQPPTDADNVASSANKERIASNG 142
VCLT L AT ++ + A+P P E + PT+A+ + + E+ NG
Sbjct: 211 VCLT-LQMATEVESTPVAEEAAPAEVEPSKPEENHVEENKPTEAEKIEDAVEGEKKEENG 269
Query: 143 AVFP 146
++ P
Sbjct: 270 SLPP 273
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.135 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,806,936
Number of Sequences: 59808
Number of extensions: 672492
Number of successful extensions: 1177
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1140
Number of HSP's gapped (non-prelim): 38
length of query: 541
length of database: 16,821,457
effective HSP length: 86
effective length of query: 455
effective length of database: 11,677,969
effective search space: 5313475895
effective search space used: 5313475895
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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