Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001640-TA|BGIBMGA001640-PA|IPR000994|Peptidase M24,
catalytic core
(280 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_05_0099 - 19044772-19044837,19044896-19045051,19045529-190456... 178 4e-45
07_01_0747 - 5724586-5724648,5725229-5725309,5725564-5725656,572... 177 1e-44
06_03_1033 - 27035977-27036144,27036420-27036544,27036695-270367... 146 2e-35
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 142 3e-34
02_02_0120 + 6984482-6984643,6984748-6984797,6984936-6984996,698... 48 1e-05
12_02_0786 + 23139854-23139901,23140054-23140122,23140531-231405... 37 0.021
09_02_0352 + 7698775-7698821,7699054-7699130,7699654-7701122 29 3.2
02_04_0352 + 22278514-22278721,22278871-22279136,22279228-22279833 29 5.5
09_02_0042 - 3402424-3402534,3403242-3403345,3403448-3403562,340... 28 9.6
08_01_0850 - 8342110-8342613 28 9.6
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 28 9.6
03_05_0418 - 24055192-24056622 28 9.6
>11_05_0099 -
19044772-19044837,19044896-19045051,19045529-19045653,
19045773-19045844,19045947-19046051,19046509-19046563,
19047334-19047414,19047499-19047633,19048279-19048342,
19048844-19048911,19049082-19049168,19050247-19050501,
19050616-19050738,19050866-19051150,19051712-19051851,
19052385-19052445,19052537-19052637,19052807-19052870,
19053020-19053127
Length = 716
Score = 178 bits (434), Expect = 4e-45
Identities = 103/261 (39%), Positives = 141/261 (54%), Gaps = 16/261 (6%)
Query: 2 GPSFSTIAGAGENGAIIHYSPLSEGPQRVITKDDMVLVDSGGQYKDGTTDITRTRHMNSS 61
G SF TI+ G N A+IHYSP + + D + L DSG QY DGTTDITRT H
Sbjct: 456 GLSFPTISSVGPNAAVIHYSPEASSCAE-LDADKIYLCDSGAQYLDGTTDITRTVHFGK- 513
Query: 62 PTPEQRRAFTRVMKGQIALGTAVLPAGILGHTIEVLARKALWDIGLNYXXXXXXXXXXYL 121
P+ ++ +T V+KG IAL +AV P G GH +++LAR LW GL+Y YL
Sbjct: 514 PSEHEKSCYTAVLKGHIALDSAVFPNGTTGHALDILARTPLWRSGLDYRHGTGHGIGSYL 573
Query: 122 NVHEAPAWILSAVSVDDPGIRPNMIYSNEPGYYEVGEYGIRHEDLVQTIEMNSSADHVLA 181
NVHE P I S + ++ +M ++EPGYYE G +GIR E+++ E N+
Sbjct: 574 NVHEGPHLISFRPSARNIPLQASMTVTDEPGYYEDGSFGIRLENVLIVKEANTKY----- 628
Query: 182 DGIIGDFDGRGAVAFYTISLAPHQTACLDVNLLTDLEIKYLNNYHARVLTTLGPILEQRG 241
+F +G +AF I+ AP+QT +D LLT EI+++N YHA L P L ++
Sbjct: 629 -----NFGDKGYLAFEHITWAPYQTKLIDTTLLTPAEIEWVNAYHADCRKILQPYLNEQ- 682
Query: 242 YNDVLEWLTDECAPITRSNAP 262
EWL PI + P
Sbjct: 683 ---EKEWLRKATEPIAGLDRP 700
>07_01_0747 -
5724586-5724648,5725229-5725309,5725564-5725656,
5725775-5725929,5726023-5726131,5726291-5726481,
5727463-5727614,5728453-5728728,5729415-5729587,
5730023-5730298,5730839-5730958,5731051-5731176,
5731629-5731970
Length = 718
Score = 177 bits (430), Expect = 1e-44
Identities = 105/253 (41%), Positives = 140/253 (55%), Gaps = 17/253 (6%)
Query: 4 SFSTIAGAGENGAIIHYSPLSEGPQRVITKDDMVLVDSGGQYKDGTTDITRTRHMNSSPT 63
SF TI+G G NGAIIHY P E V D++ L+DSG QY DGTTDITRT H PT
Sbjct: 483 SFDTISGYGANGAIIHYRPTPESCSSV-GSDNLFLLDSGAQYIDGTTDITRTVHFGE-PT 540
Query: 64 PEQRRAFTRVMKGQIALGTAVLPAGILGHTIEVLARKALWDIGLNYXXXXXXXXXXYLNV 123
P Q+ FTRV++G IAL AV P G ++VLAR +LW IGL+Y LNV
Sbjct: 541 PRQKECFTRVLQGHIALDQAVFPERTPGFVLDVLARSSLWKIGLDYRHGTGHGVGAALNV 600
Query: 124 HEAPAWILSAVSVDDPGIRPNMIYSNEPGYYEVGEYGIRHEDLVQTIEMNSSADHVLADG 183
HE P I S + ++ MI SNEPGYYE +GIR E+L+ E+N
Sbjct: 601 HEGPQSI-SYRYGNLTALQKGMIVSNEPGYYEDNSFGIRIENLLLVKEVN---------- 649
Query: 184 IIGDFDGRGAVAFYTISLAPHQTACLDVNLLTDLEIKYLNNYHARVLTTLGPILEQRGYN 243
+ F G + F ++ P Q+ +D++LL+ EI ++N YH V + P+L G++
Sbjct: 650 LPNSFGGVSYLGFEKLTFVPIQSKLVDLSLLSPSEINWINEYHDEVWEKVSPLLS--GHS 707
Query: 244 DVLEWLTDECAPI 256
L+WL P+
Sbjct: 708 --LDWLRKNTRPL 718
>06_03_1033 -
27035977-27036144,27036420-27036544,27036695-27036766,
27036872-27036976,27037513-27037567,27038196-27038276,
27039109-27039159,27039531-27039594,27040783-27040850,
27040993-27041079,27041401-27041655,27041768-27041890,
27042013-27042297,27042948-27043087,27043696-27043759,
27043929-27044048
Length = 620
Score = 146 bits (354), Expect = 2e-35
Identities = 85/224 (37%), Positives = 119/224 (53%), Gaps = 15/224 (6%)
Query: 36 MVLVDSGGQYKDGTTDITRTRHMNSSPTPEQRRAFTRVMKGQIALGTAVLPAGILGHTIE 95
++L+ Y DGTTDITRT H P+ ++ +T V+KG IAL TAV P G GH I+
Sbjct: 411 VLLLSRKHMYLDGTTDITRTVHFGK-PSEHEKSCYTAVLKGHIALDTAVFPNGTTGHAID 469
Query: 96 VLARKALWDIGLNYXXXXXXXXXXYLNVHEAPAWILSAVSVDDPGIRPNMIYSNEPGYYE 155
+LAR LW GL+Y YLNVHE P I S + ++ +M ++EPGYYE
Sbjct: 470 ILARTPLWRSGLDYRHGTGHGIGSYLNVHEGPHLISFRPSARNVPLQASMTVTDEPGYYE 529
Query: 156 VGEYGIRHEDLVQTIEMNSSADHVLADGIIGDFDGRGAVAFYTISLAPHQTACLDVNLLT 215
G +GIR E+++ E N+ +F +G +AF I+ P+QT +D LLT
Sbjct: 530 DGSFGIRLENVLIVKEANTKF----------NFGDKGYLAFEHITWTPYQTKLIDTTLLT 579
Query: 216 DLEIKYLNNYHARVLTTLGPILEQRGYNDVLEWLTDECAPITRS 259
EI+++N YH+ L P L ++ EWL PI S
Sbjct: 580 PAEIEWVNAYHSDCRKILQPYLNEQ----EKEWLRKATEPIAAS 619
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 142 bits (344), Expect = 3e-34
Identities = 80/214 (37%), Positives = 115/214 (53%), Gaps = 15/214 (7%)
Query: 44 QYKDGTTDITRTRHMNSSPTPEQRRAFTRVMKGQIALGTAVLPAGILGHTIEVLARKALW 103
+Y DGTTDITRT H P+ ++ +T V+KG IAL TAV P G GH +++LAR LW
Sbjct: 445 EYLDGTTDITRTVHFGK-PSEHEKSCYTAVLKGHIALDTAVFPNGTTGHALDILARTPLW 503
Query: 104 DIGLNYXXXXXXXXXXYLNVHEAPAWILSAVSVDDPGIRPNMIYSNEPGYYEVGEYGIRH 163
GL+Y YL VHE P I S + ++ +M ++EPGYY+ G +GIR
Sbjct: 504 KSGLDYRHGTGHGVGSYLTVHEGPHQISFRPSARNVPLQASMTVTDEPGYYQDGSFGIRL 563
Query: 164 EDLVQTIEMNSSADHVLADGIIGDFDGRGAVAFYTISLAPHQTACLDVNLLTDLEIKYLN 223
E+++ + N+ +F +G +AF I+ AP+QT +D LL EI+++N
Sbjct: 564 ENVLIVQDANTKF----------NFGDKGYLAFEHITWAPYQTKLIDATLLAPAEIEWVN 613
Query: 224 NYHARVLTTLGPILEQRGYNDVLEWLTDECAPIT 257
YH+ L P L ++ EWL PIT
Sbjct: 614 TYHSDCRRILQPYLNEQ----EKEWLRKATEPIT 643
>02_02_0120 +
6984482-6984643,6984748-6984797,6984936-6984996,
6985574-6985669,6985754-6985903,6986208-6986339,
6986641-6986768,6987285-6987327,6987935-6988018,
6989049-6989090,6989264-6989334,6989621-6989674,
6989789-6989894,6990038-6990106,6990824-6990967,
6992038-6992113,6992295-6992353
Length = 508
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 4 SFSTIAGAGENGAIIHYSPLSEGPQRVITKDDMVLVDSGGQYKDGTTDITRTRHMNSSPT 63
S++ I GEN +++HY + R + DM L+D GG+Y +DIT + +N
Sbjct: 249 SYTCICATGENSSVLHYGHAAAPNDRTLNDGDMALMDMGGEYHCYGSDITCSYPINGKFN 308
Query: 64 PEQRRAFTRVMKGQIAL 80
Q + V+K A+
Sbjct: 309 SNQTIVYNAVLKAHNAV 325
>12_02_0786 +
23139854-23139901,23140054-23140122,23140531-23140544,
23140603-23140675,23140875-23140979,23141817-23142080,
23142159-23142251,23142381-23142587,23143155-23143258,
23143436-23143502,23143576-23143683,23143943-23144033,
23144123-23144193,23144421-23144549,23144659-23144766
Length = 516
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 4 SFSTIAGAGENGAIIHYSPLSEGPQRVITKDDMVLVDSGGQYKDGTTDITRT 55
+F + G G NG++IHYS ++G + +++L+D G +Y +D+TRT
Sbjct: 326 AFHPVVGGGANGSVIHYS-RNDGR---VKAGELLLMDVGCEYHGYLSDLTRT 373
>09_02_0352 + 7698775-7698821,7699054-7699130,7699654-7701122
Length = 530
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 35 DMVLVDSGGQYKDGTTDITRTRHMNSSPTPEQRRAFTRVMKGQIALGTAVLPAGILGHTI 94
++V V + GQ +D T +SP P Q T + G + + V+ G L H
Sbjct: 226 ELVRVGNSGQDQDQRTQTC------TSPPPPQPPGATAIAGGGPSSSSTVVVDGFLRHLR 279
Query: 95 EVLARKALWDIGLNYXXXXXXXXXXYLNVHEAPAWILSAVSVDDPGIRPN 144
+L + ++ ++ L++H P + A DD PN
Sbjct: 280 SLLQDQGYSNVEVDITSTRPCHLVHLLHMHFTPMAMSPADDTDDAAAVPN 329
>02_04_0352 + 22278514-22278721,22278871-22279136,22279228-22279833
Length = 359
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 41 SGGQYKDGTTDITRTRHMNSSPTPEQRRAFTRVMKGQIALGTAVLPA 87
SGG GTT ++ T ++P P F+ ++GQ +LPA
Sbjct: 220 SGGGGGAGTTSLSATAGAAAAPPPAHVTCFSNALEGQFLDTPYLLPA 266
>09_02_0042 -
3402424-3402534,3403242-3403345,3403448-3403562,
3404344-3404391,3404519-3404608,3404819-3404893,
3405001-3405153,3405695-3405779,3408051-3408121,
3408243-3408293,3409037-3409453,3409529-3409660,
3409779-3409892,3411113-3411179,3411264-3411397,
3411486-3411701,3412627-3413418
Length = 924
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 216 DLEIKYLNNYHARV-LTTLGPILEQRGYNDVLEWLTDECAPITRSNAPAKVVTPLVL 271
D E+ + Y A+V LT LG + + ++ WL D I N P + TPL L
Sbjct: 732 DSELFSASCYAAKVTLTALGEMFQAA--RSIMNWLGDCAKVIACENEPVRWTTPLGL 786
>08_01_0850 - 8342110-8342613
Length = 167
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 125 EAPAWILSAVSVDDPGIR--PNMIYSNEPGYYEVGEYGIRHED 165
E P W SA S DD G R P M+ S P G+R E+
Sbjct: 85 EDPKWWSSATSFDDGGDRSGPLMVGSGVPAGVHTEVVGVRMEE 127
>07_03_1486 + 26899479-26899549,26899861-26899989,26900649-26900834,
26901025-26901247,26901662-26901666,26901796-26901924,
26902697-26902894,26903138-26903356,26903461-26903699,
26903797-26903888,26904009-26904224,26904327-26904554,
26904631-26904722,26904806-26904899,26905475-26905567,
26905667-26906640,26906727-26906841,26907135-26908895
Length = 1687
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 195 AFYTISLAP--HQTACLDVNLLTDLEIKY-LNNYHARVLTTLGPI 236
A ++SL P HQTA + V+ + DL+I + H+R +L P+
Sbjct: 1086 ALSSLSLGPPVHQTAVVPVHAVHDLDISHAFKERHSRQQLSLSPL 1130
>03_05_0418 - 24055192-24056622
Length = 476
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 58 MNSSPTPEQRRAFTRVMKGQIALGTAVLPAGILGHTIEV 96
M SPTP +RR F + LG A AG+ G +++
Sbjct: 78 MLGSPTPPERRTFPSLFAAYARLGRAGDGAGLHGMVVKL 116
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.137 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,421,997
Number of Sequences: 37544
Number of extensions: 346397
Number of successful extensions: 648
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 628
Number of HSP's gapped (non-prelim): 12
length of query: 280
length of database: 14,793,348
effective HSP length: 81
effective length of query: 199
effective length of database: 11,752,284
effective search space: 2338704516
effective search space used: 2338704516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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