GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001640-TA|BGIBMGA001640-PA|IPR000994|Peptidase M24,
catalytic core
         (280 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   4.2  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   5.6  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   9.7  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   9.7  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 11/85 (12%)

Query: 20  YSPLSEGPQRVITKDDMVLVDSGGQ---YKDGTTDITRTRHMNSSPTPEQRRAFTRVMKG 76
           +  + E   R+ T   +V VD+  Q    K+    I   R M   P P        +  G
Sbjct: 207 FQAMPESVSRIST-GPVVQVDNKLQPSAIKNSIMSIPPRRQMTGKPGPT-------IATG 258

Query: 77  QIALGTAVLPAGILGHTIEVLARKA 101
               G A     ++GHT+E LA  A
Sbjct: 259 SATTGDAAEEIDLMGHTVEELAAAA 283


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 11/85 (12%)

Query: 20  YSPLSEGPQRVITKDDMVLVDSGGQ---YKDGTTDITRTRHMNSSPTPEQRRAFTRVMKG 76
           +  + E   R+ T   +V VD+  Q    K+    I   R M   P P        +  G
Sbjct: 214 FQAMPESVSRIST-GPVVQVDNKLQPSAIKNSIMSIPPRRQMTGKPGPT-------IATG 265

Query: 77  QIALGTAVLPAGILGHTIEVLARKA 101
             + G A     ++GHT+E LA  A
Sbjct: 266 GASTGDAAEEIDLMGHTVEELAAAA 290


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae
          acetylcholinesterase protein.
          Length = 737

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 73 VMKGQIALGTAVLPAGILGHTIEVL 97
          ++ G++ LG  ++P G+LG T  +L
Sbjct: 6  LLMGRLRLGRRMVPLGLLGVTALLL 30


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae
          acetylcholinesterase protein.
          Length = 737

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/25 (36%), Positives = 17/25 (68%)

Query: 73 VMKGQIALGTAVLPAGILGHTIEVL 97
          ++ G++ LG  ++P G+LG T  +L
Sbjct: 6  LLMGRLRLGRRMVPLGLLGVTALLL 30


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.137    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 290,555
Number of Sequences: 2123
Number of extensions: 11917
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 4
length of query: 280
length of database: 516,269
effective HSP length: 63
effective length of query: 217
effective length of database: 382,520
effective search space: 83006840
effective search space used: 83006840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)