Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001640-TA|BGIBMGA001640-PA|IPR000994|Peptidase M24,
catalytic core
(280 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05350.1 68416.m00583 aminopeptidase P, cytosolic, putative s... 168 3e-42
At4g36760.1 68417.m05216 aminopeptidase P similar to Xaa-Pro ami... 167 7e-42
At4g36760.2 68417.m05215 aminopeptidase P similar to Xaa-Pro ami... 112 3e-25
At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolida... 41 0.001
At1g09300.1 68414.m01041 metallopeptidase M24 family protein sim... 38 0.008
At2g24120.2 68415.m02882 DNA-directed RNA polymerase, chloroplas... 28 6.1
At2g24120.1 68415.m02881 DNA-directed RNA polymerase, chloroplas... 28 6.1
>At3g05350.1 68416.m00583 aminopeptidase P, cytosolic, putative
similar to cytosolic aminopeptidase P from [Homo
sapiens] GI:8489879, [Rattus norvegicus] GI:2760920;
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 569
Score = 168 bits (409), Expect = 3e-42
Identities = 101/250 (40%), Positives = 134/250 (53%), Gaps = 16/250 (6%)
Query: 9 AGAGENGAIIHYSPLSEGPQRVITKDDMVLVDSGGQYKDGTTDITRTRHMNSSPTPEQRR 68
A +G NGAIIHY P E RV + L+DSG QY DGTTDITRT H S P+ ++
Sbjct: 335 ASSGANGAIIHYKPEPESCSRV-DPQKLFLLDSGAQYVDGTTDITRTVHF-SEPSAREKE 392
Query: 69 AFTRVMKGQIALGTAVLPAGILGHTIEVLARKALWDIGLNYXXXXXXXXXXYLNVHEAPA 128
FTRV++G IAL AV P G G ++ AR +LW IGL+Y LNVHE P
Sbjct: 393 CFTRVLQGHIALDQAVFPEGTPGFVLDGFARSSLWKIGLDYRHGTGHGVGAALNVHEGPQ 452
Query: 129 WILSAVSVDDPGIRPNMIYSNEPGYYEVGEYGIRHEDLVQTIEMNSSADHVLADGIIGDF 188
I P ++ MI SNEPGYYE +GIR E+L+ HV F
Sbjct: 453 SISFRYGNMTP-LQNGMIVSNEPGYYEDHAFGIRIENLL----------HVRDAETPNRF 501
Query: 189 DGRGAVAFYTISLAPHQTACLDVNLLTDLEIKYLNNYHARVLTTLGPILEQRGYNDVLEW 248
G + F ++ P QT +DV+LL+D E+ +LN+YHA V + P+LE + +W
Sbjct: 502 GGATYLGFEKLTFFPIQTKMVDVSLLSDTEVDWLNSYHAEVWEKVSPLLEG---STTQQW 558
Query: 249 LTDECAPITR 258
L + P+ +
Sbjct: 559 LWNNTRPLAK 568
>At4g36760.1 68417.m05216 aminopeptidase P similar to Xaa-Pro
aminopeptidase 2 [Lycopersicon esculentum] GI:15384991;
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 634
Score = 167 bits (406), Expect = 7e-42
Identities = 95/258 (36%), Positives = 136/258 (52%), Gaps = 16/258 (6%)
Query: 2 GPSFSTIAGAGENGAIIHYSPLSEGPQRVITKDDMVLVDSGGQYKDGTTDITRTRHMNSS 61
G SF TI+ G N A+IHYSP E + D + L DSG QY DGTTDITRT H
Sbjct: 392 GLSFPTISSVGSNAAVIHYSPEPEACAEM-DPDKIYLCDSGAQYLDGTTDITRTVHFGK- 449
Query: 62 PTPEQRRAFTRVMKGQIALGTAVLPAGILGHTIEVLARKALWDIGLNYXXXXXXXXXXYL 121
P+ ++ +T V KG +ALG A P G G+T+++LAR LW GL+Y YL
Sbjct: 450 PSAHEKECYTAVFKGHVALGNARFPKGTNGYTLDILARAPLWKYGLDYRHGTGHGVGSYL 509
Query: 122 NVHEAPAWILSAVSVDDPGIRPNMIYSNEPGYYEVGEYGIRHEDLVQTIEMNSSADHVLA 181
VHE P + S + ++ M ++EPGYYE G +GIR E+++ + +
Sbjct: 510 CVHEGPHQVSFRPSARNVPLQATMTVTDEPGYYEDGNFGIRLENVLVVNDAETEF----- 564
Query: 182 DGIIGDFDGRGAVAFYTISLAPHQTACLDVNLLTDLEIKYLNNYHARVLTTLGPILEQRG 241
+F +G + F I+ AP+Q +D++ LT EI +LN YH++ L P + Q
Sbjct: 565 -----NFGDKGYLQFEHITWAPYQVKLIDLDELTREEIDWLNTYHSKCKDILAPFMNQ-- 617
Query: 242 YNDVLEWLTDECAPITRS 259
+EWL P++ S
Sbjct: 618 --TEMEWLKKATEPVSVS 633
>At4g36760.2 68417.m05215 aminopeptidase P similar to Xaa-Pro
aminopeptidase 2 [Lycopersicon esculentum] GI:15384991;
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 519
Score = 112 bits (269), Expect = 3e-25
Identities = 57/124 (45%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 2 GPSFSTIAGAGENGAIIHYSPLSEGPQRVITKDDMVLVDSGGQYKDGTTDITRTRHMNSS 61
G SF TI+ G N A+IHYSP E + D + L DSG QY DGTTDITRT H
Sbjct: 392 GLSFPTISSVGSNAAVIHYSPEPEACAEM-DPDKIYLCDSGAQYLDGTTDITRTVHFGK- 449
Query: 62 PTPEQRRAFTRVMKGQIALGTAVLPAGILGHTIEVLARKALWDIGLNYXXXXXXXXXXYL 121
P+ ++ +T V KG +ALG A P G G+T+++LAR LW GL+Y YL
Sbjct: 450 PSAHEKECYTAVFKGHVALGNARFPKGTNGYTLDILARAPLWKYGLDYRHGTGHGVGSYL 509
Query: 122 NVHE 125
VHE
Sbjct: 510 CVHE 513
>At4g29490.1 68417.m04208 Xaa-Pro dipeptidase, putative / prolidase,
putative / imidodipeptidase, putative similar to
SP|P12955 Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro
dipeptidase) (Proline dipeptidase) (Prolidase)
(Imidodipeptidase) {Homo sapiens}; contains Pfam
profiles PF00557: metallopeptidase family M24, PF05195:
Aminopeptidase P, N-terminal domain
Length = 333
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 4 SFSTIAGAGENGAIIHYSPLSEGPQRVITKDDMVLVDSGGQYKDGTTDITRTRHMNSSPT 63
S++ I G+N A++HY + R D+ L+D G +Y +DIT + +N T
Sbjct: 238 SYTCICATGDNSAVLHYGHAAAPNDRTFEDGDLALLDMGAEYHFYGSDITCSFPVNGKFT 297
Query: 64 PEQ 66
+Q
Sbjct: 298 SDQ 300
>At1g09300.1 68414.m01041 metallopeptidase M24 family protein
similar to SP|P15034 Xaa-Pro aminopeptidase (EC
3.4.11.9) (X-Pro aminopeptidase) (Aminopeptidase P II)
(Aminoacylproline aminopeptidase) {Escherichia coli};
contains Pfam profiles PF00557: metallopeptidase family
M24, PF05195: Aminopeptidase P, N-terminal domain
Length = 493
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 4 SFSTIAGAGENGAIIHYSPLSEGPQRVITKDDMVLVDSGGQYKDGTTDITRT 55
+F+ + G G N ++IHY S QR I D+VL+D G + +D+TRT
Sbjct: 264 AFNPVVGGGSNASVIHY---SRNDQR-IKDGDLVLMDMGCELHGYVSDLTRT 311
>At2g24120.2 68415.m02882 DNA-directed RNA polymerase, chloroplast
(RPOPT) identical to SP|O24600 DNA-directed RNA
polymerase, chloroplast precursor (EC 2.7.7.6)
{Arabidopsis thaliana}
Length = 1035
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 225 YHARV-LTTLGPILEQRGYNDVLEWLTDECAPITRS-NAPAKVVTPLVL 271
Y A+V L LG I E ++ WL D CA I S N P + +TPL L
Sbjct: 810 YSAKVTLAALGEIFEAA--RAIMSWLGD-CAKIIASDNHPVRWITPLGL 855
>At2g24120.1 68415.m02881 DNA-directed RNA polymerase, chloroplast
(RPOPT) identical to SP|O24600 DNA-directed RNA
polymerase, chloroplast precursor (EC 2.7.7.6)
{Arabidopsis thaliana}
Length = 993
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 225 YHARV-LTTLGPILEQRGYNDVLEWLTDECAPITRS-NAPAKVVTPLVL 271
Y A+V L LG I E ++ WL D CA I S N P + +TPL L
Sbjct: 810 YSAKVTLAALGEIFEAA--RAIMSWLGD-CAKIIASDNHPVRWITPLGL 855
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.137 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,541,195
Number of Sequences: 28952
Number of extensions: 262474
Number of successful extensions: 481
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 467
Number of HSP's gapped (non-prelim): 7
length of query: 280
length of database: 12,070,560
effective HSP length: 80
effective length of query: 200
effective length of database: 9,754,400
effective search space: 1950880000
effective search space used: 1950880000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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