Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001639-TA|BGIBMGA001639-PA|IPR000994|Peptidase M24,
catalytic core, IPR012678|Ribosomal L23 and L15e, core
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces ... 169 9e-43
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 35 0.036
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 33 0.11
SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4 |S... 31 0.77
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 30 1.4
SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces pombe... 30 1.4
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 29 1.8
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 1.8
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 28 4.1
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 28 5.5
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 28 5.5
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 28 5.5
SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces pomb... 27 7.2
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 27 7.2
SPBC216.06c |swi1||replication fork protection complex subunit S... 27 7.2
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po... 27 7.2
SPAC15A10.05c |mug182||YjeF family protein|Schizosaccharomyces p... 27 7.2
SPBC3B9.09 |vps36||RBZ zinc finger protein Vps36|Schizosaccharom... 27 9.5
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 9.5
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 9.5
>SPAC22G7.01c ||SPAPJ696.03c|aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 598
Score = 169 bits (412), Expect = 9e-43
Identities = 106/342 (30%), Positives = 179/342 (52%), Gaps = 32/342 (9%)
Query: 425 YIVPTADAHNSQYIAPSDARREWVSGLRGSSGTSVVTATRALVWTDARYFTQFEVEVDGS 484
Y+VP+ DAH+S+Y +DARR ++SG GS+G +V+ T A ++TD RYF Q ++D +
Sbjct: 24 YVVPSEDAHSSEYTCDADARRAFISGFDGSAGCAVIGETSAALFTDGRYFNQASQQLDEN 83
Query: 485 LWELMRQGTD--PSIQNWLVANMPPNSVVAVDPTTYTRNSWNTLQAAL-TRANIKLEAIS 541
W LM+QG P+ + + N V +D + T + L+ +L ++ L
Sbjct: 84 -WTLMKQGFTGVPTWEEYCTQMTKCNEKVGIDSSLITFPAAKALRESLFLKSGAVLVGDH 142
Query: 542 ENLIDLARVSIGDGPPSRPNNPLIPLTVNFTGRPSSDKISQLLQQMNSRGASALVLTALD 601
+NL+D+ G P P LI + + G +K+ L + M + A V++ LD
Sbjct: 143 DNLVDIV---WGASRPKEPLEKLIVQEIKYAGLGVDEKLHNLREAMKEQKIEAFVVSMLD 199
Query: 602 DIAYTLNLRGTDIPFNPVFFAYLVIRTDLVAPNNIILFWGNGVLSSDISQHLASENTRLQ 661
++A+ NLRG D+P+NPVFFAY LV + L+ ++ ++S+HL + ++
Sbjct: 200 EVAWLYNLRGADVPYNPVFFAY-----SLVTLDEAFLYVDERKVTPEVSKHL---DGFVK 251
Query: 662 ARPYAEIF--------TYLGTLAASNVNIQSS---------VSPVALMKVIKNEVELQGF 704
PY +F T +G + ++ I +S +SP++ K IKN+ EL+G
Sbjct: 252 ILPYDRVFSDAKNSNLTRIGISSKTSWCIATSFGETKVMPILSPISQAKGIKNDAELKGM 311
Query: 705 RNAHVKDGVAVVRALYWLHRQLDTGAEVTEVGLVNKLAEYRR 746
+ H++DG A+V WL L++G ++ E KL ++RR
Sbjct: 312 KECHIRDGCALVEYFAWLDEYLNSGNKINEFDAATKLEQFRR 353
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 35.1 bits (77), Expect = 0.036
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 160 RLNSNKSKSNCSGQNKETINLKINIDRNNKKFIEKRSKLENILGNIKTK---VCNSEADV 216
R+ + +KSNC +E L+ + K FIE+ SKL L +IK + + + D+
Sbjct: 672 RIELDYTKSNCKQMEEEMQVLREGHESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDL 731
Query: 217 ITSEEEPLIFNDDLA 231
++ E+ N+ LA
Sbjct: 732 LSELEKSKSLNNSLA 746
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 33.5 bits (73), Expect = 0.11
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 154 PIPIKTRLNSNKSKSNCSGQNKETINLKINIDR--NNKKFIEK---RSKLENILGNIKTK 208
P PI T L + SKS SG K T N KI N+ I+K +++ + G K
Sbjct: 170 PSPIITNLKTESSKS--SGAKKATSNAKITDTMLFNHFSSIQKPKLKAEGSTLKGQALKK 227
Query: 209 VCNSEADVITSEEEPLIFNDDLAKDFENIKIPIAGEDAVGSAVPRSLPPLKRRPAKNSPQ 268
+ +T EEE +++ L E + A SA +++ K+ Q
Sbjct: 228 TLEDTWNNLT-EEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQKDKDQEQ 286
Query: 269 DSISDRN 275
D++SD+N
Sbjct: 287 DTVSDKN 293
>SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 30.7 bits (66), Expect = 0.77
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 28 PPEIHQNDPGKTVTQSRPKRSPKQLKN-VDKNPEYYPEKVKRTKPVKKIIMKPKSTLKVI 86
PPEI KT T+ RP+ ++L + + +N K+ K K+ K K+ ++
Sbjct: 14 PPEIGNKQKSKTPTERRPEGISRELYSLLGENSAPLAIYQKKFKEKPKVSHKAKNWVRQP 73
Query: 87 GGIRKRK----LENPIRGSHLTMDSNSDWEAD 114
I RK L + + S + ++ DW D
Sbjct: 74 FSISSRKDDFTLHHWVLKSEVDSEAYEDWNKD 105
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 147 DDQYSEDPIPIKTRLNSNKSKSNCSGQNKETINLKINIDRNNKKFIEKRSKLENILGNIK 206
+D S + +P++ NS S++ +++ + N+D + + ENI+
Sbjct: 300 NDANSSNSVPVE--FNSLHSQNVDYRDEVDSLRPQFNVDEQSS-ISHSSNASENIVDGAV 356
Query: 207 TKVCNSEADVITSEEEPLIFNDD 229
T+ E+D + EP+I N+D
Sbjct: 357 TQANGIESDFTRVDHEPIIVNND 379
>SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 233
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 295 NDRCQSDGVMREIESNLDEFLDDSLVTIYKIMSNDR 330
ND +S G++ E E ++D+ LDD+LV ++ +R
Sbjct: 10 NDILRSKGILPEKEPDVDDVLDDALVDAKQLAHENR 45
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 141 WWEDPPDDQYSEDPIPIKTRLNSNKSKSNCSGQNKETINLKINIDRNNKKFIEKRSK 197
W E +DQ +D T L++N+S ++ + + N +NN++ KR++
Sbjct: 1096 WMEGTMEDQTPDDISLASTSLSTNRSLYTQYTKSSNSSKMTRNTSKNNRRLERKRAR 1152
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 160 RLNSNKSKSNCSGQNKETINLKINIDRNNKKFIEKRSKLENILGNIKT 207
R N + +S S +N + + ++ +NK I+K+ ++++ NI+T
Sbjct: 646 RANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDVDSLEKNIQT 693
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 165 KSKSNCSGQ-NKETINLKINIDR---NNKKFIEKRSKLENILGNIKTKVCNSEADVITSE 220
K KS+ Q E L +++++ NN+ +E+RS L N L ++K + +S+ +
Sbjct: 1140 KEKSDALEQLTNEKNELIVSLEQSNSNNEALVEERSDLANRLSDMKKSLSDSDNVISVIR 1199
Query: 221 EEPLIFNDDL 230
+ + ND+L
Sbjct: 1200 SDLVRVNDEL 1209
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 7 KSKPQKQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPEYYPEKV 66
KSKP+K+ + + K+K+ + N G V R +S K L++ K P K+
Sbjct: 1527 KSKPEKKAKIDEEMKKIKLDVGVYLPSNPDGVIVGIDR--KSGKPLQSHAKAPFMATFKI 1584
Query: 67 KRTKPV 72
++ K V
Sbjct: 1585 RKEKLV 1590
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 27.9 bits (59), Expect = 5.5
Identities = 47/224 (20%), Positives = 85/224 (37%), Gaps = 18/224 (8%)
Query: 2 SKNYTKSKPQKQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKN--VDKNP 59
S+N + S + R+ S SK + + +++DP K S + S K+L+N V
Sbjct: 840 SRNNSISNVSHRERSNSVSSKSRETRTSASNESDPKK----STQRDSSKKLENSTVVSGS 895
Query: 60 EYYPEKVKRTKPVKKIIMKPKSTLKVIGGIRKRKLENPIRGSHLTMDSNSDWEADRPIQE 119
K K +K KP+ LK + G K +++D + P++
Sbjct: 896 PSSSSKSDAAKSIKP--QKPEPALKPVEGTADPK-STKRNHQETEKTADTDVSSTEPVKR 952
Query: 120 AELA-WNSDEDLLEILTCPSPVWWEDPPDDQYSEDPIPIKTRLNSNKSKSNCSGQNKETI 178
+ A N D E+ S + + +P S+ + ++ + +N I
Sbjct: 953 QKTADVNDDVGEEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTNDI 1012
Query: 179 NLKINIDRNNKKFIEKRSKLENILGNIKTKVCNSEADVITSEEE 222
N N+D N ++K + + T A T+EEE
Sbjct: 1013 NGDSNMD--NVATVDKSTDA------VDTSTATVAATTTTAEEE 1048
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 2 SKNYTKSKPQKQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPEY 61
+KNY +++ P + + + P + +QND + + + PK N+ N
Sbjct: 187 AKNYEENREPMSPSPQEALPLMPSSPPSQDYQNDQNHLILYTNSESIPK--LNLRSNELV 244
Query: 62 YPEKVK 67
YP K
Sbjct: 245 YPPPSK 250
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 502 VANMPPNSVVAVDPTTY-TRNSWNTLQAALTRANIKLEAISENLIDLARVSIGDGPPSRP 560
VA+ +S+ + + Y S N + A LT++ +NL D ++ + GP P
Sbjct: 243 VASANTHSLEILSSSAYHPSGSSNGISAGLTQSVASPVGQVDNLADFSQSPLRRGPSRFP 302
Query: 561 NNPLIPLTVNFTGRPSSDKISQLLQQMNSRGA 592
N +P+ + + R + ++ L+ + ++ +
Sbjct: 303 TNSNVPVGNSMSIRDTDSPLNILVDKAKAKAS 334
>SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 27.5 bits (58), Expect = 7.2
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 151 SEDPIPIKTRLNSNKSKSNCSGQNKETINLKINIDRNNKKFIEKRSKLENILGNIK---- 206
S IP LNSN SKS + + TI + + N+ I+K SK ++ N K
Sbjct: 26 SRHSIP-SDELNSNSSKSLNNDRISRTIENSLQKETNSDNKIKKLSKTKSNPTNPKSEED 84
Query: 207 -TKVCNS--EADVIT 218
+++C S E+++IT
Sbjct: 85 PSQICQSFDESNIIT 99
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 7.2
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 468 WTDARYFTQFEVEVDGSLWELMRQGT--DPSI-QNWLVANMPPNSVVAVDPTTYTRNSWN 524
W DARYF++ E+ SL L + + DP + +N L A + P + + + +
Sbjct: 445 WEDARYFSKENRELLRSLDSLKAKTSKKDPIVRRNELKATIGPLLISLISKAAGDMIAES 504
Query: 525 TLQAALTRANIKLEAISENLIDLARVSIGDGPPSRPNNPLIPLTVNFTGRPSSDKISQLL 584
L A + E +D A + DG P + N+ + + S + L+
Sbjct: 505 LASQVLVDALLYAPCEKEEAVD-ATLKAFDGNPEQDNHLIHQI-------HCSRALKTLV 556
Query: 585 QQMNSRGASALVLTALDDI 603
Q + GA V+ A DD+
Sbjct: 557 QNGHWSGAEKQVVKAEDDL 575
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 78 KPKSTLKVIGGIRKRKLENPIRGSHLTMDSNSDWEADRPIQEAELA 123
K K+ +I ++K EN +R + +DS+ D E D ++E A
Sbjct: 888 KMKTNETIIDHTTRKKKENHLRSAKYIVDSDDDSETDIAFFQSEAA 933
>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 218
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 99 RGSHLTMDSNSDWEADRPIQEAELAWNSDEDLLE 132
R H M N W P EAE+AWN+ + + E
Sbjct: 165 RERHKRMRENI-WAISEPELEAEIAWNTTQGITE 197
>SPAC15A10.05c |mug182||YjeF family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 103 LTMDSNSDWEADRPIQEAELAWNSDEDLLEILTCPSP 139
L++D+ S WE D Q+ + D D L LT P P
Sbjct: 158 LSVDAPSSWEIDEGPQKEGPLKDFDPDTLISLTAPKP 194
>SPBC3B9.09 |vps36||RBZ zinc finger protein
Vps36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 467
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 572 TGRPSSDKISQLLQQMNSRGASALVLTALDDIAYTLNLRGTDI 614
TG SDK+ QLL + N G L LD++ + N R DI
Sbjct: 272 TGTQQSDKVQQLLNKSNQLG--VLRGNHLDNVPVSANSRLYDI 312
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 20 QSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPEYYPEKVKRTK 70
Q +L+M + E+H+ K V QSR + +Q+ + N + Y V+ K
Sbjct: 520 QRRLRMVED-ELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELK 569
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 27.1 bits (57), Expect = 9.5
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 80 KSTLKVIGGIRKRKLENPIRGSHLTMDSNSD-WEADRPIQEAELAWN-SDEDLLEILTCP 137
++ LK+ +KRK + ++ ++ + S D E + ++++ A + S + LE +
Sbjct: 527 ETNLKIPIPEKKRKFQEVLQSKNILVSSTEDSHEPVKVTEDSQTAIHVSKFEDLENKSME 586
Query: 138 SP----VWWEDPPDDQYSEDPIPIKTRLNSNKSKSNCSGQNKETINLKINIDRNNKKFIE 193
S + E DD+ D IP+ + S + K T K D + FIE
Sbjct: 587 SEQSLQLLSESENDDKPLIDLIPLLAIKRKDNLVSGVLEKGKSTSTSKTKFDTSIVDFIE 646
Query: 194 K-RSKLENILGNIKTK-VCNSEADVITSEEEPLIFNDDLAKDFENIK 238
K ++++ +L K K +C+ V S + + D++ + K
Sbjct: 647 KPKTEISEVLPEEKRKAICDESQTVRVSIDRGVTKTRDVSSPVSDEK 693
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.131 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,450,597
Number of Sequences: 5004
Number of extensions: 149435
Number of successful extensions: 381
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 368
Number of HSP's gapped (non-prelim): 26
length of query: 750
length of database: 2,362,478
effective HSP length: 78
effective length of query: 672
effective length of database: 1,972,166
effective search space: 1325295552
effective search space used: 1325295552
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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