Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001639-TA|BGIBMGA001639-PA|IPR000994|Peptidase M24,
catalytic core, IPR012678|Ribosomal L23 and L15e, core
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g36760.2 68417.m05215 aminopeptidase P similar to Xaa-Pro ami... 145 8e-35
At4g36760.1 68417.m05216 aminopeptidase P similar to Xaa-Pro ami... 145 8e-35
At3g05350.1 68416.m00583 aminopeptidase P, cytosolic, putative s... 94 4e-19
At2g42470.1 68415.m05254 meprin and TRAF homology domain-contain... 34 0.40
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 34 0.40
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 33 0.69
At1g09090.2 68414.m01015 respiratory burst oxidase protein B (Rb... 32 1.2
At4g19590.1 68417.m02879 DNAJ heat shock N-terminal domain-conta... 32 1.6
At1g11510.1 68414.m01322 DNA-binding storekeeper protein-related... 32 1.6
At5g46840.1 68418.m05771 RNA recognition motif (RRM)-containing ... 31 2.8
At3g47620.1 68416.m05184 TCP family transcription factor, putati... 31 2.8
At2g17787.1 68415.m02061 expressed protein 31 2.8
At5g52700.1 68418.m06542 heavy-metal-associated domain-containin... 30 4.9
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 30 4.9
At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein ... 30 4.9
At4g38780.1 68417.m05491 splicing factor, putative strong simila... 30 4.9
At2g28890.1 68415.m03511 protein phosphatase 2C family protein /... 30 4.9
At4g19550.1 68417.m02875 expressed protein 30 6.5
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 29 8.5
At5g54670.1 68418.m06807 kinesin-like protein C (KATC) 29 8.5
At5g40450.1 68418.m04905 expressed protein 29 8.5
At5g04040.1 68418.m00384 patatin-related contains Patatin domain... 29 8.5
At3g24630.1 68416.m03093 hypothetical protein 29 8.5
At3g13570.1 68416.m01707 SC35-like splicing factor, 30a kD (SCL3... 29 8.5
>At4g36760.2 68417.m05215 aminopeptidase P similar to Xaa-Pro
aminopeptidase 2 [Lycopersicon esculentum] GI:15384991;
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 519
Score = 145 bits (352), Expect = 8e-35
Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 5/207 (2%)
Query: 423 DAYIVPTADAHNSQYIAPSDARREWVSGLRGSSGTSVVTATRALVWTDARYFTQFEVEVD 482
DA +VP+ D H S+Y++ D RRE+VSG GS+G +++T A +WTD RYF Q ++
Sbjct: 9 DALVVPSEDYHQSEYVSARDKRREFVSGFSGSAGLALITKKEARLWTDGRYFLQALQQLS 68
Query: 483 GSLWELMRQGTDPSIQNWLVANMPPNSVVAVDPTTYTRNSWNTLQAALTRANIKLEAISE 542
W LMR G DP ++ W+ N+P + + VD + ++ N + + N KL +
Sbjct: 69 DE-WTLMRMGEDPLVEVWMSDNLPEEANIGVDSWCVSVDTANRWGKSFAKKNQKLITTTT 127
Query: 543 NLIDLARVSIGDGPPSRPNNPLIPLTVNFTGRPSSDKISQLLQQMNSRGASALVLTALDD 602
+L+D S PPS +P++ + F GR S K L ++ GA LV+ ALD+
Sbjct: 128 DLVDEVWKS---RPPSE-MSPVVVHPLEFAGRSVSHKFEDLRAKLKQEGARGLVIAALDE 183
Query: 603 IAYTLNLRGTDIPFNPVFFAYLVIRTD 629
+A+ N+RGTD+ + PV A+ ++ TD
Sbjct: 184 VAWLYNIRGTDVAYCPVVHAFAILTTD 210
Score = 58.4 bits (135), Expect = 2e-08
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 659 RLQARPYAEIFTYLGTLAASNVNIQSSVSPVALMKVIKNEVELQGFRNAHVKDGVAVVRA 718
RL P + + L A V +Q S P++L K +KN VEL+G +NAHV+DG AVV+
Sbjct: 280 RLWVDPASCCYALYSKLDAEKVLLQPS--PISLSKALKNPVELEGIKNAHVRDGAAVVQY 337
Query: 719 LYWLHRQL 726
L WL Q+
Sbjct: 338 LVWLDNQM 345
>At4g36760.1 68417.m05216 aminopeptidase P similar to Xaa-Pro
aminopeptidase 2 [Lycopersicon esculentum] GI:15384991;
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 634
Score = 145 bits (352), Expect = 8e-35
Identities = 74/207 (35%), Positives = 117/207 (56%), Gaps = 5/207 (2%)
Query: 423 DAYIVPTADAHNSQYIAPSDARREWVSGLRGSSGTSVVTATRALVWTDARYFTQFEVEVD 482
DA +VP+ D H S+Y++ D RRE+VSG GS+G +++T A +WTD RYF Q ++
Sbjct: 9 DALVVPSEDYHQSEYVSARDKRREFVSGFSGSAGLALITKKEARLWTDGRYFLQALQQLS 68
Query: 483 GSLWELMRQGTDPSIQNWLVANMPPNSVVAVDPTTYTRNSWNTLQAALTRANIKLEAISE 542
W LMR G DP ++ W+ N+P + + VD + ++ N + + N KL +
Sbjct: 69 DE-WTLMRMGEDPLVEVWMSDNLPEEANIGVDSWCVSVDTANRWGKSFAKKNQKLITTTT 127
Query: 543 NLIDLARVSIGDGPPSRPNNPLIPLTVNFTGRPSSDKISQLLQQMNSRGASALVLTALDD 602
+L+D S PPS +P++ + F GR S K L ++ GA LV+ ALD+
Sbjct: 128 DLVDEVWKS---RPPSE-MSPVVVHPLEFAGRSVSHKFEDLRAKLKQEGARGLVIAALDE 183
Query: 603 IAYTLNLRGTDIPFNPVFFAYLVIRTD 629
+A+ N+RGTD+ + PV A+ ++ TD
Sbjct: 184 VAWLYNIRGTDVAYCPVVHAFAILTTD 210
Score = 58.4 bits (135), Expect = 2e-08
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 659 RLQARPYAEIFTYLGTLAASNVNIQSSVSPVALMKVIKNEVELQGFRNAHVKDGVAVVRA 718
RL P + + L A V +Q S P++L K +KN VEL+G +NAHV+DG AVV+
Sbjct: 280 RLWVDPASCCYALYSKLDAEKVLLQPS--PISLSKALKNPVELEGIKNAHVRDGAAVVQY 337
Query: 719 LYWLHRQL 726
L WL Q+
Sbjct: 338 LVWLDNQM 345
>At3g05350.1 68416.m00583 aminopeptidase P, cytosolic, putative
similar to cytosolic aminopeptidase P from [Homo
sapiens] GI:8489879, [Rattus norvegicus] GI:2760920;
contains Pfam profile PF00557: metallopeptidase family
M24
Length = 569
Score = 93.9 bits (223), Expect = 4e-19
Identities = 61/217 (28%), Positives = 107/217 (49%), Gaps = 15/217 (6%)
Query: 489 MRQGTD--PSIQNWLVANMPPNSVVAVDPTTYTRNSWNTLQAALTRANIKLEAI-SENLI 545
MR G P+ W+ + P V +DP ++ ++ L+ + + N +L + + NL+
Sbjct: 1 MRAGNPGVPTASEWIADVLAPGGRVGIDPFLFSADAAEELKEVIAKKNHELVYLYNVNLV 60
Query: 546 DLARVSIGDGPPSRPNNPLIPLTVNFTGRPSSDKISQLLQQMNSRGASALVLTALDDIAY 605
D D P P+ + + + G + K+ L Q+ G SA+V++ LD+IA+
Sbjct: 61 DEIWK---DSRPKPPSRQIRIHDLKYAGLDVASKLLSLRNQIMDAGTSAIVISMLDEIAW 117
Query: 606 TLNLRGTDIPFNPVFFAYLVIRTDLVAPNNIILFWGNGVLSSDISQHLASENTRLQARPY 665
LNLRG+D+P +PV +AYL++ D LF N ++ ++ HL +N ++ RPY
Sbjct: 118 VLNLRGSDVPHSPVMYAYLIVEVDQAQ-----LFVDNSKVTVEVKDHL--KNAGIELRPY 170
Query: 666 AEIFTYLGTLAASNVNI--QSSVSPVALMKVIKNEVE 700
I + +LAA + S VA++ K+ E
Sbjct: 171 DSILQGIDSLAARGAQLLMDPSTLNVAIISTYKSACE 207
Score = 56.0 bits (129), Expect = 9e-08
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 687 SPVALMKVIKNEVELQGFRNAHVKDGVAVVRALYWLHRQLDTGAEVTEVGLVNKLAEYR 745
SP++ K IKN+ EL+G +N+H++D A+ WL ++ A +TEV + ++L E+R
Sbjct: 241 SPISWAKAIKNDAELKGMKNSHLRDAAALAHFWAWLEEEVHKNANLTEVDVADRLLEFR 299
>At2g42470.1 68415.m05254 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein contains Pfam
profile PF00917: MATH domain
Length = 898
Score = 33.9 bits (74), Expect = 0.40
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 179 NLKINIDRNNKKFIEKRSKLENILGNIKTKVCNSEADVITSEEEPLIFND---DLAKDFE 235
+LK+ +D+ K K LE+ L ++KT++ +A T+ ++ L+ D DL + E
Sbjct: 769 DLKVEMDKEKAKSTAKVLSLEDTLSDLKTELGKEKAKNATATDKFLLLKDTYSDLKVELE 828
Query: 236 NIKIPIAGEDAVGSAVPRSLPPLKRRPAKNSPQDSISDRNITFLDDSD 283
K A ++ +L LK +S + N+ +D D
Sbjct: 829 KEKAKSTSAAAKVLSLKEALSDLKVELDDQKIVNSATTANVLSWEDDD 876
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 33.9 bits (74), Expect = 0.40
Identities = 29/133 (21%), Positives = 63/133 (47%), Gaps = 4/133 (3%)
Query: 3 KNYTKSKPQKQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPEYY 62
K K K +++ R +L +++ +I + K+ + +P++S K+ K ++ E
Sbjct: 9 KKEKKEKKERKERKRREAEELAVREK-KISKKHKSKSKEEEKPEKSKKKSKKYEEVEE-- 65
Query: 63 PEKVKRTKPVKKIIMKPKSTLKVIGGIRKRKLEN-PIRGSHLTMDSNSDWEADRPIQEAE 121
EK P K + K K + +++ P+ +T++S+SD+E D+ +
Sbjct: 66 EEKSPSPSPSPKKSKESKKKHKRSSDESEEIVDSKPVTVPIVTIESDSDFEFDKEDIKNL 125
Query: 122 LAWNSDEDLLEIL 134
L S E+L+ ++
Sbjct: 126 LESYSKEELINLI 138
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 33.1 bits (72), Expect = 0.69
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 7 KSKPQKQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPEYYPEKV 66
+S Q+ P+ E S K + KP E + P K T +P+ SPK + P+ PE+
Sbjct: 510 ESSKQEPPKPEESP-KPEPPKPEESPKPQPPKQETP-KPEESPKPQPPKQETPK--PEES 565
Query: 67 KRTKPVKKIIMKPKSTLK 84
+ +P K+ KP+ + K
Sbjct: 566 PKPQPPKQETPKPEESPK 583
Score = 31.1 bits (67), Expect = 2.8
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 7 KSKPQKQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPEYYPEKV 66
K KP+ P+ ESS K + KP E + +P K +P+ ++ +++P+ P K
Sbjct: 501 KPKPES-PKQESS--KQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQPPKQ 557
Query: 67 KRTKP 71
+ KP
Sbjct: 558 ETPKP 562
>At1g09090.2 68414.m01015 respiratory burst oxidase protein B
(RbohB) / NADPH oxidase identical to respiratory burst
oxidase protein B from Arabidopsis thaliana [gi:3242783]
Length = 843
Score = 32.3 bits (70), Expect = 1.2
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 695 IKNEVELQGFRNAHVKDGVAVVRA-LYWLHRQLDTGAEVTEVGLVNKLAEY 744
IKN+ ++ N H+K+ VA RA YW+ R+ + +EV +N++AEY
Sbjct: 687 IKNQNSIERGTNQHIKNYVATKRAYFYWVTREQGSLEWFSEV--MNEVAEY 735
>At4g19590.1 68417.m02879 DNAJ heat shock N-terminal
domain-containing protein protein YJL162c, Saccharomyces
cerevisiae, PIR2:S56945; contains Pfam PF00226: DnaJ
domain;
Length = 345
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Query: 7 KSKPQKQPRAESSQSKLKMKKPPEIHQNDPGK----TVTQSRPKRSPKQLKNVDKNPEYY 62
+ +P K+P + Q + K+PP+ + P + Q +P+ PKQ N K P
Sbjct: 133 QKQPPKKPPNQPKQQPNQQKQPPDQQKQPPNQPRQPPNQQKQPQNEPKQPPNQPKQPPNQ 192
Query: 63 PE---KVKRTKPVKKI 75
+ + KP K+
Sbjct: 193 ASTNGRARSKKPTSKV 208
>At1g11510.1 68414.m01322 DNA-binding storekeeper protein-related
similar to storekeeper protein GI:14268476 [Solanum
tuberosum]
Length = 352
Score = 31.9 bits (69), Expect = 1.6
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 116 PIQEAELAWNSDEDLLEILTCPSPVWWEDPPDDQYSEDPIPIKTRLNSNKSKSNCSGQNK 175
P+++ A +SDE+ EI S D DD SE+P P+KT L++ SG ++
Sbjct: 7 PLEDPPSASSSDEEGKEIARNSS----SDDEDDVSSENPSPLKTTLDAVSDSE--SGSDE 60
Query: 176 ET 177
ET
Sbjct: 61 ET 62
>At5g46840.1 68418.m05771 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 501
Score = 31.1 bits (67), Expect = 2.8
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 147 DDQYSEDPIPIKTRLNSNKSKSNCSGQNKETINLKI-NIDRNNKKFIEKRSKLEN 200
+++ E +P+KT+ + + K SG KETI+ + +K+ KR ++EN
Sbjct: 72 EEEEEETDLPVKTKKSKKEKKLTDSGDEKETISEAVEESGLVSKRKKRKRDEIEN 126
>At3g47620.1 68416.m05184 TCP family transcription factor, putative
auxin-induced basic helix-loop-helix transcription
factor - Gossypium hirsutum, EMBL:AF165924
Length = 489
Score = 31.1 bits (67), Expect = 2.8
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 1 MSKNYTKSKPQKQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPE 60
+ K+ Q+QP SS S + + ++ Q+ P +S+P+ + K+L +
Sbjct: 44 LGKHDPDDNHQQQPSPSSSSSLFSLHQHQQLSQSQPQSQSQKSQPQTTQKELLQTQEESA 103
Query: 61 YYPEKVKRTKPVKKIIMKPKSTLKVIGGIRKRKLENP 97
K P+K+ K + T KV G R R++ P
Sbjct: 104 VVAAK---KPPLKRASTKDRHT-KVDG--RGRRIRMP 134
>At2g17787.1 68415.m02061 expressed protein
Length = 324
Score = 31.1 bits (67), Expect = 2.8
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 2 SKNYTKSKPQKQPRAESSQSKLKMKKPPEIHQNDPG--KTVTQSRPKRSPKQLKNVDKNP 59
SK+ K +K+ + SS + L+ +KP HQ PG K + + P QL N+ +N
Sbjct: 201 SKDNRKVSKEKKMPSLSSCNPLEQEKPTSSHQETPGPSKLLCRKCPPSMAGQLLNLIEN- 259
Query: 60 EYYPEKVK 67
+ P++V+
Sbjct: 260 -WAPDRVE 266
>At5g52700.1 68418.m06542 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 370
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 7 KSKPQ-KQPRAESSQSKLKMKKPPEIHQNDP--GKTVTQSRPKRSPKQLKNVDKNPEYYP 63
K++P+ KQ +Q+ K K+PPE+ QN+ G + K+ P++ K V + P+ P
Sbjct: 291 KAQPEVKQQNHNDAQAPDKKKQPPEVKQNEQEGGFFGFFGKKKQQPQKEKIVSEIPK--P 348
Query: 64 EKVKR 68
++ R
Sbjct: 349 QRTSR 353
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 30.3 bits (65), Expect = 4.9
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 12 KQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPEYYPEKVKRTKP 71
+Q E +K +KP + + K V + +PKR P++ + P+ E + KP
Sbjct: 23 RQDVLEFDLNKTPQQKPSKRKRKFMPKVVVEGKPKRKPRKPAEL---PKVVVEGKPKRKP 79
Query: 72 VKKIIMKPKSTLKVIGGIRKRKLENPIRGSHLTMDSNSDWEADRPIQEAELAWNSD 127
+K + K K G +K+ L+ + S+ + ++ A N D
Sbjct: 80 -RKAATQEKVKSKETGSAKKKNLKESATKKPANVGDMSNKSPEVTLKSCRKALNFD 134
>At5g04270.1 68418.m00419 zinc finger (DHHC type) family protein low
similarity to Golgi-specific DHHC zinc figer protein
[Mus musculus] GI:21728103; contains Pfam profile
PF01529: DHHC zinc finger domain
Length = 284
Score = 30.3 bits (65), Expect = 4.9
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 666 AEIFTYLGTLAASNVNIQSSVSPVALMKVIKNEVELQGFRNAHVK-DGVAVVRALYWLHR 724
A +F+ L +L +++I V P + +VE G+ N++VK DG L+ R
Sbjct: 28 ALLFSLLASLCLFSLSICVLVDPGRVPASYAPDVEDSGWSNSNVKVDGF----FLWCYKR 83
Query: 725 QLDTGAEVTEVG-LVNKLAEYRRC 747
+ D G ++ + G +V+ + E R+C
Sbjct: 84 RFDVGVKLRKNGFIVDAVTETRKC 107
>At4g38780.1 68417.m05491 splicing factor, putative strong similarity
to splicing factor Prp8 [Homo sapiens] GI:3661610;
contains Pfam profile PF01398: Mov34/MPN/PAD-1 family
Length = 2332
Score = 30.3 bits (65), Expect = 4.9
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 446 EWVSGLRGSSGTSVVTATRALVWTDARYFTQFEVEVDGS-LWELMRQGTDPSIQNWLVAN 504
+W G+ G + + +V ++ FE ++D + L L+R DP + N++
Sbjct: 952 KWCQGINNLQGIWDTSDGQCVVMLQTKFEKLFE-KIDLTVLNSLLRLVLDPKLANYVTGK 1010
Query: 505 MPPNSVVAVDPTTYTRNSWNTLQAALTRANIKLE----AISENLIDLARVSIGDGPPSRP 560
N V++ +YT N++ ++ L A+ ++ + L+ L R S GPP RP
Sbjct: 1011 N--NVVLSYKDMSYT-NTYGLIRG-LQFASFVVQFYGLVLDLLLLGLTRASEIAGPPQRP 1066
Query: 561 N 561
N
Sbjct: 1067 N 1067
>At2g28890.1 68415.m03511 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2c
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 654
Score = 30.3 bits (65), Expect = 4.9
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 142 WEDPPDDQYSEDPIPIKTRLNSNKSKSNCSGQNKETINLKINIDRNNKKFIEKRSK-LEN 200
W+DP D S D ++ R +S++ KS +++ + DR+ + ++ RS L+
Sbjct: 308 WDDPKTDAKSSDEADVENRDSSSEKKSKNWEESQR--RWRCEWDRDLDRLLKDRSNGLDL 365
Query: 201 ILGNIKTKVCNSEADVITSEEEPLIFNDDLAKDFENIKIPIAG 243
+ V + + + EE + N D+ D EN ++ + G
Sbjct: 366 DPDPNSSDVLKALSQALRKTEEAYLENADMMLD-ENPELALMG 407
>At4g19550.1 68417.m02875 expressed protein
Length = 212
Score = 29.9 bits (64), Expect = 6.5
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 160 RLNSNKSKSNCSGQNKETINLKINIDRNNKKF----IEKRSKLEN--ILGN-IKTKVCNS 212
+ ++ K++SN +NK+ +L+IN + +K F KR+KL+ ++G+ I+ NS
Sbjct: 92 KTSATKTESNAETENKKRPSLEINYNVLDKLFDPENSPKRAKLDKPVVVGDQIEYSKQNS 151
Query: 213 EADVITS----EEEPLIFNDDLAKDFENIKIPIAGEDAVGS 249
E ++ S EEE D +D+ N E+ G+
Sbjct: 152 EESLLKSQYSEEEEEEAEEPDWNEDYSNEDAYRGNEECYGN 192
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 7 KSKPQKQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPEYYPEKV 66
KS ++S + K +KP + P K+V++ +P + K DKN E E++
Sbjct: 632 KSDDDSDTSPKASSKRKKTEKPAKEQAAAPLKSVSKEKPVIGKRGGKGKDKNKEPSDEEL 691
Query: 67 K 67
K
Sbjct: 692 K 692
>At5g54670.1 68418.m06807 kinesin-like protein C (KATC)
Length = 754
Score = 29.5 bits (63), Expect = 8.5
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 194 KRSKLENILGNIKTKVC-NSEADVITSEEEPLIFNDDLAKDFENIKIPIAGEDAVGSAVP 252
++ KL+N L + K C + E + EEE + ++L K+FE++++ +A E A
Sbjct: 95 EQEKLKNAL-ELNEKHCVDMEVSLKNKEEELNMIIEELRKNFESVQVQLAREQTEKLAAN 153
Query: 253 RSL 255
SL
Sbjct: 154 DSL 156
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 29.5 bits (63), Expect = 8.5
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 119 EAELAWNSDEDLLEILTCPSPVWWEDPPDDQYSEDPIPIKTRLNSNKSKSN-----CSGQ 173
EA A +ED E P +D DD+ ED +KT ++S++ +S+ G+
Sbjct: 424 EAHSAIGGEEDGQETKENTEPS--KDLKDDKEQEDSETVKTIISSDEVRSSDVQAEVFGE 481
Query: 174 NKETINLKINIDRNNK-KFIEKRSKLENILGNIKTKVCNSEADVITSEEEPLIFNDDLAK 232
+ E + +I DR+ + + IE ++K I+T V I + E L+ + +
Sbjct: 482 HTEPCSSEIKDDRHGRDESIEVKAKETG--PEIETAVDGESVHEIETTERVLL-EAEKEE 538
Query: 233 DFENIKI 239
D E IKI
Sbjct: 539 DKEEIKI 545
>At5g04040.1 68418.m00384 patatin-related contains Patatin domain
PF01734
Length = 825
Score = 29.5 bits (63), Expect = 8.5
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 483 GSLWELMRQGTDPSIQNWLVANMPPNSVVAVDPTTYTRNSWNTLQAALTRANIKLEAISE 542
GSL +L+ TD ++ N+ + +V+ +++TR ++ A AN ++ +
Sbjct: 619 GSLDDLV---TDNNLHASSGRNLSDSETESVELSSWTRTGGPLMRTA--SANKFIDFVQS 673
Query: 543 NLIDLARVSIGDGPPSRPNNPLIPLTVNFTGRPSS 577
ID+A V G S PN+P +P +FT P S
Sbjct: 674 LDIDIALVR---GFSSSPNSPAVPPGGSFTPSPRS 705
>At3g24630.1 68416.m03093 hypothetical protein
Length = 724
Score = 29.5 bits (63), Expect = 8.5
Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 157 IKTRLNSNKSKSNCSGQNKETINLKINIDRNNKKFIEKRSKLENILGNIKTKVCNSEADV 216
+ R+ + + +G NK + L + + + +K+ E K+E G + + S A V
Sbjct: 355 VHPRMINQRKDHQANGSNK--MKLPLRMTKKDKEPKEMVPKVEENEGKVIKLMSPSNAKV 412
Query: 217 ITSEEEPLIFNDDLAKDFENIKIPIAGEDAVGSAVPRSLPPLKRRPAKNS 266
+T + +PL N L ++I G+D + P S P+ ++ + NS
Sbjct: 413 LTRDRKPLETNKKLVVKKDDI---AEGKDRHRALKPPS-NPVSQKISNNS 458
>At3g13570.1 68416.m01707 SC35-like splicing factor, 30a kD (SCL30a)
almost identical to SC35-like splicing factor SCL30a
GI:9843661 from [Arabidopsis thaliana]; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 262
Score = 29.5 bits (63), Expect = 8.5
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 8 SKPQKQPRAESSQSKLKMKKPPEIHQNDPGKTVTQSRPKRSPKQLKNVDKNPEYYPEKVK 67
S ++ E S S+ + PG+ + SR SP++ + KN Y PE+ +
Sbjct: 178 SPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSR---SPRRSVSPRKNRSYTPEQAR 234
Query: 68 RTKPVKKIIMKP 79
PV + P
Sbjct: 235 SQSPVPRQSRSP 246
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.131 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,598,602
Number of Sequences: 28952
Number of extensions: 761141
Number of successful extensions: 1873
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1840
Number of HSP's gapped (non-prelim): 43
length of query: 750
length of database: 12,070,560
effective HSP length: 87
effective length of query: 663
effective length of database: 9,551,736
effective search space: 6332800968
effective search space used: 6332800968
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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