Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001638-TA|BGIBMGA001638-PA|IPR000994|Peptidase M24,
catalytic core
(630 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7919| Best HMM Match : Herpes_UL1 (HMM E-Value=2.9) 113 3e-25
SB_27029| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 1e-18
SB_29821| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 3e-11
SB_29090| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-05
SB_42186| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-05
SB_29533| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 9e-04
SB_24638| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.074
SB_7296| Best HMM Match : PHD (HMM E-Value=0.0013) 34 0.30
SB_15666| Best HMM Match : DUF1252 (HMM E-Value=6.4) 31 2.1
SB_33628| Best HMM Match : BRF1 (HMM E-Value=1.8) 31 2.8
SB_4424| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_7010| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.7
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 29 8.5
SB_5015| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.14) 29 8.5
SB_46540| Best HMM Match : RVT_1 (HMM E-Value=4.8e-27) 29 8.5
SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
SB_12901| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
>SB_7919| Best HMM Match : Herpes_UL1 (HMM E-Value=2.9)
Length = 262
Score = 113 bits (273), Expect = 3e-25
Identities = 68/170 (40%), Positives = 100/170 (58%), Gaps = 18/170 (10%)
Query: 173 GRTAGEKIAELRRKMAEKKASALVLTALDDIAYTLNLRGSDIEYNPVFFSYLIVMETNVV 232
G++ +K+ ELR + +KKA+A VLTALDD+A+ NLRGSDIE+NPVFF+Y IV NV
Sbjct: 88 GKSWQDKVKELRTTLKKKKATAFVLTALDDVAWMFNLRGSDIEFNPVFFAYAIVTLDNVF 147
Query: 233 LYWGDGQLPPSVTDHLREEGVDSVEG----KPYGDILEGLKEMARELSESGDGRHVIWLS 288
L+ ++ SV HL + DS E K Y +I + L+E + S IW+S
Sbjct: 148 LFIDQNKIDSSVRKHLELDNSDSNETRITLKEYNEIQDALREEVAKGSR-------IWIS 200
Query: 289 NDANEAIHRAASGSDVLKRPIDLISEVSPVKLAKLVKNEIELQGFRNCHI 338
++++ A+ L ++ E SPV L+K +KNE+EL+G R H+
Sbjct: 201 SNSSMAL-------TSLVPETCMLDESSPVALSKALKNEVELEGLRQSHV 243
Score = 29.9 bits (64), Expect = 6.4
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 33 SEYIDAADARREWISAFTGSAG 54
SEY+ + D RR +IS F GSAG
Sbjct: 67 SEYLASCDLRRGFISGFDGSAG 88
>SB_27029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 91.9 bits (218), Expect = 1e-18
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 130 LKKISAQLVPISNNLVDDVRMELGDPAPKRSHNELAPLHVRYTGRTAGEKIAELRRKMAE 189
L + QL ++ NLVD + + P + + L L V+YTG+T K+ ++R KM E
Sbjct: 168 LNESKIQLEAVTPNLVDVIWAD----QPDKPNATLISLSVKYTGKTWQSKVTDMRVKMRE 223
Query: 190 KKASALVLTALDDIAYTLNLRGSDIEYNPVFFSYLIVMETNVVLYWGDGQLPPSVTDHLR 249
ASAL+L LD+IA+ LNLRGSD+ +NPVF SY+I ++V L+ ++ V HL
Sbjct: 224 ANASALILYKLDEIAWLLNLRGSDVPFNPVFISYVIATASDVTLFIDKQKVTADVQAHLS 283
Query: 250 EEGVDS--VEGKPYGDILEGLKEMARELS 276
S V PY ++ +K +A + S
Sbjct: 284 VGSCTSMCVRLMPYERVVPEIKRIASQES 312
Score = 90.2 bits (214), Expect = 4e-18
Identities = 42/69 (60%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 20 LAAYIIPTADAHNSEYIDAADARREWISAFTGSAGTAVVTSSQALVWTDGRYYTQFEREV 79
L AYI+P DAH SEYI D RR ++S FTGSAGTAVVT +QA +WTDGRYY Q E+
Sbjct: 6 LDAYIVPPTDAHQSEYISTHDMRRAFVSGFTGSAGTAVVTRTQAALWTDGRYYVQAAMEL 65
Query: 80 DLSAWTLMK 88
D W LM+
Sbjct: 66 D-DNWKLMR 73
>SB_29821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 67.7 bits (158), Expect = 3e-11
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 311 LISEVSPVKLAKLVKNEIELQGFRNCH-IKDGIA---VVRFFRWLHDQIDSGEQITEVQA 366
L+ + SPVKL K +KN +E++G RN H + G F E I +
Sbjct: 3 LLLKFSPVKLPKAIKNSVEIKGMRNAHKFQRGHTSGTTQYMFEGSAVTFSRCENIAFSVS 62
Query: 367 SDKLLEFRRDEK-DFMGPSFGTIAGSGANGAIIHYSPDREGQQTVIERDHMFLLDSGGQY 425
L F ++ ++MGPSF +I G G N AIIHYSP ++ + I D L+D+G QY
Sbjct: 63 LQGLRTFSAGKQAEYMGPSFFSIVGYGPNAAIIHYSPTKDSDRQ-ITTDSTLLIDTGSQY 121
Query: 426 R 426
+
Sbjct: 122 K 122
>SB_29090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 49.2 bits (112), Expect = 1e-05
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
Query: 427 DGTTDITRTRHMSGNPTAEQKDAFTRVLKGQIMIGSALFPKGVKGNVLDSFAR--HALWE 484
DGTTD+TRT H G PT ++ ++L ++ + + + A+ A
Sbjct: 2 DGTTDVTRTVHF-GKPTRYEQVDTRQILYMKLRQTYKIRTGVIYTRQILCLAKLQTAAEC 60
Query: 485 XXXXXXXXXXXXXXXXXNVHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRHE 544
N GP G++ R PD+ L G S EPG+Y+ G +GIR E
Sbjct: 61 FTRVFKGHVSLAMTVFPNKTTGPQGINLRARPDEAPLEAGMTTSIEPGYYEDGNFGIRIE 120
Query: 545 DLIEIVAVDKGSDHPKAKNLRGDYDGRGVLGFSTLTL 581
++ I V+ L+ ++ +G LGF TL
Sbjct: 121 NVYIIKPVE----------LQYNFKNKGWLGFEHCTL 147
>SB_42186| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 147
Score = 49.2 bits (112), Expect = 1e-05
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 13/157 (8%)
Query: 427 DGTTDITRTRHMSGNPTAEQKDAFTRVLKGQIMIGSALFPKGVKGNVLDSFAR--HALWE 484
DGTTD+TRT H G PT ++ ++L ++ + + + A+ A
Sbjct: 2 DGTTDVTRTVHF-GKPTRYEQVDTRQILYMKLRQTYKIRTGVIYTRQILCLAKLQTAAEC 60
Query: 485 XXXXXXXXXXXXXXXXXNVHEGPSGVSWRPYPDDPGLNVGQILSNEPGFYKVGEYGIRHE 544
N GP G++ R PD+ L G S EPG+Y+ G +GIR E
Sbjct: 61 FTRVFKGHVSLAMTVFPNKTTGPQGINLRARPDEAPLEAGMTTSIEPGYYEDGNFGIRIE 120
Query: 545 DLIEIVAVDKGSDHPKAKNLRGDYDGRGVLGFSTLTL 581
++ I V+ L+ ++ +G LGF TL
Sbjct: 121 NVYIIKPVE----------LQYNFKNKGWLGFEHCTL 147
>SB_29533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 42.7 bits (96), Expect = 9e-04
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 49 FTGSAGTAVVTSSQALVWTDGRYYTQFEREVDLSAWTLMKQ 89
F G A+VT + A +WTDGRY+ Q E E+D + W L K+
Sbjct: 2 FPEVTGMAIVTVASAALWTDGRYFLQAEMEMDCN-WKLQKE 41
>SB_24638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 42.3 bits (95), Expect = 0.001
Identities = 19/70 (27%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 310 DLISEVSPVKLAKLVKNEIELQGFR---NCHIKDGIAVVRFFRWLHDQIDSGE-QITEVQ 365
+ +S +K + V +++E +G + N I+D + + + WL +++ G+ +TE+
Sbjct: 23 EAVSMCVKIKPYEAVLDDVEKEGLKPKANIWIRDAVVISEYLDWLEREVEKGDNNLTEIT 82
Query: 366 ASDKLLEFRR 375
D+LLEFR+
Sbjct: 83 GEDQLLEFRK 92
>SB_18816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 36.3 bits (80), Expect = 0.074
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 384 SFGTIAGSGANGAIIHYSPDREGQQTVIERDHMFLLDSGGQYRDGTTDITRTRHMSGNPT 443
++ + GA +HY + + V+ + L+DSG +Y +DITRT ++G T
Sbjct: 316 AYPPVVAGGALANTLHYINNTQ----VLRDGDLVLMDSGCEYHGYASDITRTWPVNGTFT 371
Query: 444 AEQKDAFTRVLKGQ 457
Q++ + VL+ Q
Sbjct: 372 GPQRELYDIVLEVQ 385
>SB_7296| Best HMM Match : PHD (HMM E-Value=0.0013)
Length = 873
Score = 34.3 bits (75), Expect = 0.30
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 299 ASGSDVLKRPIDLISEVSPVKLAK---LVKNEIELQGFRNCHIKDGIAVVRFFRWLHDQI 355
A+G+ + KR ID + + VK A L+ NE EL + K A ++ FR + +I
Sbjct: 111 ATGAPIQKR-IDCTTSLEKVKDATADYLLDNEKELSYIQEWSAK-AKAEIQPFREMRLKI 168
Query: 356 DSGEQITEVQASDKLLEFRRDEKDFMGPSFGTIAGSGANGAIIHYSPDREGQQTVIERDH 415
+ A D+ E +++ M FG +A N ++ SP + G ++
Sbjct: 169 KKRLE----NARDQEKEEEMEKELAMKKKFGDLAAKAGNSGMVESSPGKPGMVQAVKLQK 224
Query: 416 MFLLDSGGQYRDGTT 430
+ G Y+D T+
Sbjct: 225 YTITPFEGDYKDWTS 239
>SB_15666| Best HMM Match : DUF1252 (HMM E-Value=6.4)
Length = 219
Score = 31.5 bits (68), Expect = 2.1
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 309 IDLISEVSPVKLAKLVKNEIELQGFRNCHIKDGIAVVRFFRWLHDQIDSGEQITEVQASD 368
I + +V L+ NE+EL ++ K A ++ FR + +I + A D
Sbjct: 42 IKSLEKVKDATADYLLDNEMELSYIQDWSAK-AKAEIQPFREMRIEIKKRLE----NARD 96
Query: 369 KLLEFRRDEKDFMGPSFGTIAGSGANGAIIHYSPDREGQQTVIERDHMFLLDSGGQYRDG 428
+ E +++ M FG +A N ++ SP + G ++ + G Y+D
Sbjct: 97 QEKEEEMEKELAMKKKFGDLAAKAGNSGMVESSPGKPGMVQAVKLQKYTVTPFEGDYKDW 156
Query: 429 T 429
T
Sbjct: 157 T 157
>SB_33628| Best HMM Match : BRF1 (HMM E-Value=1.8)
Length = 369
Score = 31.1 bits (67), Expect = 2.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 241 PPSVTDHLREEGVDSVEGKPYG-DILEGLKEMARELSESGDGRHVIWLSNDANEAI 295
PP + + +D V+G+P D L+ L LSE D + W S + EA+
Sbjct: 188 PPPAIEEVSPTRIDGVDGEPSPIDTLKKLAATHSSLSELSDAKMPYWWSQEWEEAL 243
>SB_4424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 34
Score = 30.7 bits (66), Expect = 3.7
Identities = 15/30 (50%), Positives = 23/30 (76%), Gaps = 3/30 (10%)
Query: 5 RLQALRALMSSQRPV---LAAYIIPTADAH 31
RLQALRALM+++ + AY++P++DAH
Sbjct: 2 RLQALRALMANKTITDGGVQAYMVPSSDAH 31
>SB_7010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 579
Score = 30.7 bits (66), Expect = 3.7
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 367 SDKLLEFRRDEKDFMGPSFGTIAGSGANGAIIHYSPDREGQQTVIERDHMFLLDSGGQYR 426
+D L+E +R EK+ + I SG N I+ DR + ER H FL D+ G +
Sbjct: 2 ADGLIEAQRAEKNLITEGKYVILKSGNNLRIVQVLKDR---KIAFERLHFFLDDAIGCHY 58
Query: 427 DGTTDITRTR 436
T ++ R +
Sbjct: 59 GTTFEVDRDK 68
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 366 ASDKLLEFRRDEKDFMGPSFGTIAGSGANGAIIHYSPDREGQQTVIERDHMFLLDSGGQY 425
A D+ E +++ M FG +A N ++ SP + G ++ + G Y
Sbjct: 12 ARDQEKEEEMEKELAMKKKFGDLAAKAGNSGMVESSPGKPGMVQAVKLQKYTITPFEGDY 71
Query: 426 RDGT 429
+D T
Sbjct: 72 KDWT 75
>SB_5015| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.14)
Length = 247
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 366 ASDKLLEFRRDEKDFMGPSFGTIAGSGANGAIIHYSPDREGQQTVIERDHMFLLDSGGQY 425
A D+ E +++ M FG +A N ++ SP + G ++ + G Y
Sbjct: 94 ARDQEKEEEMEKELAMKKKFGDLAAKAGNSGMVESSPGKPGMVQAVKLQKYTITPFEGDY 153
Query: 426 RDGT 429
+D T
Sbjct: 154 KDWT 157
>SB_46540| Best HMM Match : RVT_1 (HMM E-Value=4.8e-27)
Length = 751
Score = 29.5 bits (63), Expect = 8.5
Identities = 17/79 (21%), Positives = 34/79 (43%)
Query: 97 LEKWLASNLKDGDVVGVDPQTMTRDEWTPIQTALKKISAQLVPISNNLVDDVRMELGDPA 156
+EK +N + D + D + D P+ ++ S + + N++ R+E P
Sbjct: 615 IEKKAEANKRRYDALSDDLTLQSGDRVLPVYVVQQEQSGKKRVLHRNILLPYRVERAGPE 674
Query: 157 PKRSHNELAPLHVRYTGRT 175
P++ H PL ++ T
Sbjct: 675 PRQQHRRKDPLRRQHEDDT 693
>SB_43690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 780
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 42 RREWISAFTGSAGTAVVTSSQALVWTDG--RYYTQFER 77
RREW+S+F G + SS L+ T G +++T ER
Sbjct: 289 RREWLSSFIDLGGLHRLLSSLTLLGTKGHEKFFTTLER 326
>SB_12901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 29.5 bits (63), Expect = 8.5
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 366 ASDKLLEFRRDEKDFMGPSFGTIAGSGANGAIIHYSPDREGQQTVIERDHMFLLDSGGQY 425
A D+ E +++ M FG +A N ++ SP + G ++ + G Y
Sbjct: 12 ARDQEKEEEMEKELAMKKKFGDLAAKAGNSGMVESSPGKPGMVQAVKLQKYTITPFEGDY 71
Query: 426 RDGT 429
+D T
Sbjct: 72 KDWT 75
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.135 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,385,816
Number of Sequences: 59808
Number of extensions: 859127
Number of successful extensions: 1933
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1909
Number of HSP's gapped (non-prelim): 27
length of query: 630
length of database: 16,821,457
effective HSP length: 87
effective length of query: 543
effective length of database: 11,618,161
effective search space: 6308661423
effective search space used: 6308661423
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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