GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001637-TA|BGIBMGA001637-PA|IPR006818|Anti-silencing
protein, ASF1-like
         (216 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.2  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.2  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.3  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 13/51 (25%), Positives = 24/51 (47%)

Query: 75  QAPPPDVTKIPENDALGVTVVLLTCSYRGQEFVRVGYFINNDYSESEPELR 125
           QAPP    K+    +      +L C  +G++ + + + INN   E + + R
Sbjct: 794 QAPPQFDIKLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNR 844


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 87  NDALGVTVVLLTCSYRGQEFVRVGYFINNDYSESEPELRE 126
           ND  G  ++L+T     Q    + +  NN  SE+E E +E
Sbjct: 236 NDVFGTCLILITGKSIVQLLTCLNFITNNLKSENE-EFKE 274


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 87  NDALGVTVVLLTCSYRGQEFVRVGYFINNDYSESEPELRE 126
           ND  G  ++L+T     Q    + +  NN  SE+E E +E
Sbjct: 236 NDVFGTCLILITGKSIVQLLTCLNFITNNLKSENE-EFKE 274


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 10  VVLDNPSPFLNPFQFELTFECIEELKEDLEWKMIYVGSAETEEHDQVLDTIYVGPIPEGR 69
           V + N S  + PF    +     + + + E++        T++H Q+   +Y G +    
Sbjct: 264 VTIQNVSNTIPPFASRGSMHFPNQYQMNQEYR---TDRKHTQQHYQMNQNMYPGEMYNPE 320

Query: 70  HMFVFQAPP 78
           H  V +A P
Sbjct: 321 HTTVNEAQP 329


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 10  VVLDNPSPFLNPFQFELTFECIEELKEDLEWKMIYVGSAETEEHDQVLDTIYVGPIPEGR 69
           V + N S  + PF    +     + + + E++        T++H Q+   +Y G +    
Sbjct: 212 VTIQNVSNTIPPFASRGSMHFPNQYQMNQEYR---TDRKHTQQHYQMNQNMYPGEMYNPE 268

Query: 70  HMFVFQAPP 78
           H  V +A P
Sbjct: 269 HTTVNEAQP 277


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 10  VVLDNPSPFLNPFQFELTFECIEELKEDLEWKMIYVGSAETEEHDQVLDTIYVGPIPEGR 69
           V + N S  + PF    +     + + + E++        T++H Q+   +Y G +    
Sbjct: 395 VTIQNVSNTIPPFASRGSMHFPNQYQMNQEYR---TDRKHTQQHYQMNQNMYPGEMYNPE 451

Query: 70  HMFVFQAPP 78
           H  V +A P
Sbjct: 452 HTTVNEAQP 460


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 13/49 (26%), Positives = 21/49 (42%)

Query: 101 YRGQEFVRVGYFINNDYSESEPELRENTPAKPQFDKVVRNILASAPRVT 149
           Y G   +   Y   N Y ++   L + TP  PQ    +  +LA +  V+
Sbjct: 213 YPGTSAMLAAYQRYNPYLQAASMLPKPTPLVPQQGFNMERLLAPSTEVS 261


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.134    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,361
Number of Sequences: 317
Number of extensions: 2505
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 216
length of database: 114,650
effective HSP length: 54
effective length of query: 162
effective length of database: 97,532
effective search space: 15800184
effective search space used: 15800184
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)